Scar022626.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sarcophaga carnaria
Gene Symbol
dl
Assembly
GCA_958299815.1
Location
OY283152.1:53538187-53541399[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-74 1.1e-70 238.0 0.1 1 169 69 239 69 239 0.99
2 2 3.2 1.7e+04 -3.4 0.9 103 129 442 467 432 487 0.58

Sequence Information

Coding Sequence
ATGTATCAAAATCCTGACAATAATAACGTTTTAGCTGGTGGAGGTGGAAGTGCCAATAATGGTACAACTACCAGCAACGCAAACGCTCAAATTATGGATCCAAATCAACAATCACCACAGCCGCAAACTATAAATTATAATGGAATGCAACCTCAGCAACAAACGCCAGCCAATACGAATAAAAGTGTACGCAAAAAACCTTACGTTAAAATAACGGAACAGCCAGCAAGTAAAGCCTTGAGATTCCGTTATGAGTGTGAAGGCCGTTCGGCTGGTTCTATACCGGGTGTCAATTCAACACCCGAATGTAAAACATATCCCACAATTGAAATTGTAGGATATAAAGGACGTGCCGTAGTTGTTGTGTCGTGTGTCACCAAAGATCCGCCATATAGACCTCATCCTCATAATCTAGTCGGCAAAGAGGGATGCAAGAAGGGTGTCTGTACTCTTGAAATCAACTCTGAAACGATGAGGGCTGTATTCAGCAACCTTGGCATACAGTGTGTAAAAAAGAAGGATATTGAAGCAGCTCTTAAAGCTCGAGAAGAAATTCGCGTCGATCCATTCAAaaCCGGATTTGCGCACAGATATCAACCCTCTAGTATTGATCTAAACTCGGTTAGGTTATGTTTCCAAGTGTTCATGGAGAGTGATCAAAAAGGCCGTTTTACACAGCCCTTGGCGCCTGTGGTATCGGAACCTATATTCGACAAAAAGGCCATGTCCGACCTAGTCATTTGTCGTCTGTGTAGTTGCTCAGCCAGTGTCTTAGGCAATACGCAGATAATTTTGTTGTGCGAAAAAGTAGCCAAAGAAGACATTTCGGTGCGTTTCTATGAAGAGAATAATGGCCAAACGATTTGGGAGGCATATGGAGATTTTCAGCATACCGACGTGCATAAACAGACTGCCATAACATTTAAAACGCCCCGATATCGTAAAATTGACATAACCGAACCTGCTAAGGTGTTTATTCAATTAAAGCGTCCATCGGATGGTATTACGAGTGAACCACTTCCATTCGAATATGTTCCCTTAGAATCAGGTAGGATACGATTTTTGGATCTTCGTCGGAACCTGAAGAGGAAGCCCGACTTAGATATTTTCCAAGAAATTCTTGGTAGCGACATAAAGAATTATATTCCTAACGATAAAGTGGAAGTTATTGATTTAAATACTCCATCGGGTGAGGATTTACCAAAAGAACTGCAGGAATCACACACGGAAACCCTACTGACATCGACAAACGACATAACGAACATCGACAATAAAGACATTAACGATGACAACATCGACGAAGATGAAGTCAAACGACGTAGCCAACAAGAAATTGATACAATCATTGATGAGAAAATGCGCGAATTAGAAGAGCAGCAACAGCACCAAAACTCACAAGATCAGTCTGACTCTTTGCAAGAGGTTGTTGAACTTTTAAACGCTGGACAACAACGTGACAATGCAGTCAACGTTAtagatacaaacaaaaaaattacagaatggatgaattcaaatgaattgcaAGATGCTGAAAATCCAATAGCAACTGAATCCATTGACACTACGACATCATCGACCACAACCGCAACTACCCAGATTTCTACCAACAACTCAGAAGACAAGACATTAAGTGATCTTCTAGAACAGGTTGCGGAATTAGATGACATTTACTCCGATCATATTATACGTCGTGACACTTATAACAATATTCTATTAAACGAGTTAAATGGCATTGATTCTTGTGTCCCGGCAACGGACGGCTCCCTTGTGGACGAAGGCCAGACAGCAATGGATGTGGAAGAAAGCTTTGATGACGCGGCCACCTATAGCAGTTTACAGATTGCTTTTAAGAACCCCATCACAATACCAATGGATGACATTATACAACTTGCACCACCTTCTCATCAATTGCCTGACTCTGATAATAACCATTACGATCCAATCGAAGTCCGATCAAAGCCGTCATCAGCCTCAATGTCTATTACCGACATTAAAAGACCAGATGTTTTAGCGCAATCTCTACCAGAATTACCTATACCGCCTAGACCAGCGCCACCCAAAATAAATTCGCCTCATATGCACGTTACCGCTGCCGAGGAGGAAAAACTGCCTCCTTTGCCGCCAAAACGTTTACGAAAGCAAGACAGCAATGCAGAAAATCGATCAATTGAAGCCAATATTGGCGGCACTTTAGATCGCAAATCTCGTCAGCAAACACCCATTATCATTATGAAGACACCTGACCAATCGCCACCTAATAAGCGTCTACCACAAACACCAGGAAATTCTAATACTTTGCCAAAGCAAAAGAAACCTGGtttcttttcaaaacttttttcaagGCGCAAAAGTAAATCCGATTTGAGTCAAACTAATGATCAAATAGCCGGCTGTAAGGCTGACTCAAAAGCAAGCAGTCCAGCTCTAAGCCGAGAACCTAGCATTGGTCATTTCAATTCGAATGACTCAAATCGTGCATCAGTACGTTCAATTAAATCCCTTCAACCTACATCATTGCCAAACTCTCCAGAGAAAAAAGTTCAAAAGTTTGGCAAACCTGTGGGTCGTAGTGTTAGCAGTGTATCTGGAAAACGACCTGCACACTTAAATGCCAATGTCATACACATTCCTCTCAAGGGTGACAGTGTTAGTAGTTTGCCCCACAATGAGGAATATTCTCATGCTAGTACTCTCACACTGAGTAACACATTAGATCGCAAGACAGCTTCTGCTCTTCAATTGGCCGACATACCAATTTCTGATGGTAACATGGAACTCGTAGCTATAGCGGACAGACAAAGTCTGCGAAACTTATGCGAGGGCGAATTTAATGTTCAACTTGATCCTAATGTTGATTTGACCGAAGCCGAACATTTTGCCTTATACACCAGTATACCGCCACAAGCGACGGTCAGTGAGTTTGATGAAACATCAGCATATTATGCTCCTGTTGATGCTGGTGAAATTTTAACACCCGAAGAGGTGGCTCAACGTTTAGTCGCAGCAAATCgattaaattaa
Protein Sequence
MYQNPDNNNVLAGGGGSANNGTTTSNANAQIMDPNQQSPQPQTINYNGMQPQQQTPANTNKSVRKKPYVKITEQPASKALRFRYECEGRSAGSIPGVNSTPECKTYPTIEIVGYKGRAVVVVSCVTKDPPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFAHRYQPSSIDLNSVRLCFQVFMESDQKGRFTQPLAPVVSEPIFDKKAMSDLVICRLCSCSASVLGNTQIILLCEKVAKEDISVRFYEENNGQTIWEAYGDFQHTDVHKQTAITFKTPRYRKIDITEPAKVFIQLKRPSDGITSEPLPFEYVPLESGRIRFLDLRRNLKRKPDLDIFQEILGSDIKNYIPNDKVEVIDLNTPSGEDLPKELQESHTETLLTSTNDITNIDNKDINDDNIDEDEVKRRSQQEIDTIIDEKMRELEEQQQHQNSQDQSDSLQEVVELLNAGQQRDNAVNVIDTNKKITEWMNSNELQDAENPIATESIDTTTSSTTTATTQISTNNSEDKTLSDLLEQVAELDDIYSDHIIRRDTYNNILLNELNGIDSCVPATDGSLVDEGQTAMDVEESFDDAATYSSLQIAFKNPITIPMDDIIQLAPPSHQLPDSDNNHYDPIEVRSKPSSASMSITDIKRPDVLAQSLPELPIPPRPAPPKINSPHMHVTAAEEEKLPPLPPKRLRKQDSNAENRSIEANIGGTLDRKSRQQTPIIIMKTPDQSPPNKRLPQTPGNSNTLPKQKKPGFFSKLFSRRKSKSDLSQTNDQIAGCKADSKASSPALSREPSIGHFNSNDSNRASVRSIKSLQPTSLPNSPEKKVQKFGKPVGRSVSSVSGKRPAHLNANVIHIPLKGDSVSSLPHNEEYSHASTLTLSNTLDRKTASALQLADIPISDGNMELVAIADRQSLRNLCEGEFNVQLDPNVDLTEAEHFALYTSIPPQATVSEFDETSAYYAPVDAGEILTPEEVAQRLVAANRLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01260765;
90% Identity
iTF_01315260;
80% Identity
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