Sbul005340.1
Basic Information
- Insect
- Sarcophaga bullata
- Gene Symbol
- stc
- Assembly
- GCA_005959815.1
- Location
- QOCX01009500.1:4223-7121[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.7 1.3e+04 -3.9 1.6 15 19 239 243 238 243 0.81 2 13 0.049 3.7e+02 1.0 0.2 4 10 272 278 271 279 0.95 3 13 0.00012 0.9 9.4 17.8 4 19 286 301 284 301 0.93 4 13 5.3e-08 0.0004 20.1 15.8 3 19 339 355 337 355 0.91 5 13 1.7e-07 0.0013 18.5 20.4 1 19 395 413 395 413 0.98 6 13 1.2e-05 0.093 12.5 14.4 4 18 461 475 454 476 0.86 7 13 0.0058 44 4.0 9.3 1 11 516 526 516 527 0.96 8 13 2 1.5e+04 -4.3 1.1 4 10 531 537 531 537 0.58 9 13 4e-10 3e-06 26.9 15.5 1 18 543 560 543 561 0.97 10 13 1.4 1.1e+04 -3.7 0.9 6 10 590 594 590 595 0.81 11 13 2 1.5e+04 -8.1 10.6 10 18 608 617 597 618 0.76 12 13 4.9e-08 0.00037 20.2 14.7 1 16 654 669 654 679 0.92 13 13 2.4e-07 0.0018 18.0 13.3 1 19 686 705 686 705 0.97
Sequence Information
- Coding Sequence
- ATGAAACACAACAGCAGagatcagcagcagcagcagcaacaacaacaaccgggAGCTTCAAAATCATCAGgagcttttaataaaaacagtcgcaatggtaatggtaatggtaatggaaATGGCGATAAACTAAGAAATAATGAAGCACAAacacagaataataataacaataacaataacagtaacaataacaacaacaagggGGATAAAAACAATGCCAATAAACGTTATCAAAATGGCCGACGTTCACAAGACTTTGCTGAACGTGAAGATCGTTATGATCGTTACATAGAACGTGGTGAACGTTCGGATCGTGGTCACAATCAACGTAATCAACAGCAGCGCAATGACTATCATCAACGTTACGACAATTATCGCAGTAATAAAAGACGTGATGATTGGAATCGTAATCGTGATCGCATTAATGGTTTTCGTGTAGAGGAAAAATATGACAATGATAATGGCAAAGACAGTCCTTTGCCCTCACCCGAAAAGAAATCACCTAAAAAGGTGTACGAAAAGGAGAATGAAAAACTCTCACAGCGAGAGAAACTCATCAGAGACATAGAAACTAGACGTCTGGAATGTTTGGTTTGTGTAGAGCCCATTAAGGCACATCAGGGTGTTTGGTCCTGTCACAATTGTTATCACATACTCCACTTgcaatgtataataaaatggGCCTCTTCCTCGAAATCAGATGATGGCTGGCGTTGTCCAGCTTGccaaaatgttgaaaaagatGTTCCTCGTGATTACTATTGTTTCTGTGGTAAATTGAAAAATCCTACAAATAATCGCCAGGATATAGCGCACTCATGCGGTGAAGTTTGCGGACGTATAGAGGGTTGTCCTCATGCCTGCACGTTACAGTGTCACCCAGGCCCATGTCCTCCATGCCAAGCTCAAGTCAAACGTGAATGTGGTTGTGGTAAAACATCCAAAATAATGCAATGCTGCGTCAAAGAAGTCATTGAATGCGATTCCACCTGTGAGAAGCTATTGAACTGTGAATCACACACATGTCAGGAAAAATGTCACGAAGGCAAGTGTCCGCCTTGCAAAGAGAAAGTTGATCAAAAATGTCACTGTTCTAAACAAGAACGCCAAGTAACTTGCACACGTGAGTCGCACGATAAACACAATTACTCGTGCGGCAAACCTTGTGGTAAAGATCTGTCCTGTGGCAATCATAAATGTAAGGATTGTTGTCATCCCGGTGAGTGTAGACCTTGTAAATTGAGTCCTGATTTTGTGACTTTTGCCCATGGTGTAAAAATGCCTATAATAGCGGGTCAACGCAAATCATGTTTGGATCCCATACCCGTGTGTGAAGGTGTATGCGGCAAGACTTTGAAATGTGGCAAGGCCACCAATCCCCATCACTGTACTTCCAAATGCCATTTGGGTAATTGTCCACCATGCAATAAACAAACAGCCGTTAAATGTCGCTGTGGCCACATGGATCAAATGATTAAATGTCGCCAATTGTCAACCAGAGCCGATGATGCCAGATGCAAAAAGCGCTGTACGAAAAAACGTTCCTGTGGCAAACATAAATGTAATCAAGAATGCTGCATAGACATCGATCATTTCTGCCCACTGCCTTGTAATTATACGCTCTCTTGTGGTAAGCATAAATGTGATCAGCCTTGTCATCGCGGCAATTGTCCGCCCTGCTATCGTTCCTCTTTCGAAGAACTTTTCTGTGAATGTGGTGCTGAGGTAATTTATCCACCCGTGCCATGTGGCACTAAGCGTCCAGTTTGCAAGCGTCCCTGTTCGCGTAAACACCCTTGTGATCATCCACCTCAACATAACTGTCATTCGGCTGCCACTTGTCCTCCTTGTATGATGTTCACTACGAAATGGTGTTTTGGCCAGCATGAACAACGTAAAACCATTCCGTGCTCTCAACAGAGTTTCTCGTGTGGTTTGGCTTGCAATAAGCCACTACCTTGTGGAAGACACAAGTGCATAAAGACTTGTCATGAGGGGCCTTGTCAAGTGCCCGGCGAAATTTGCAAACAAAGTTGTACTACACCACGTTCCACTTGCGGTCACAAATGCATGGCTCCCTGTCATAACGGCGACTGTCCAGATTCGCCTTGTAAGGAAATGGTTGAAGTTCAATGTGAATGTGGAAATCGCAAGCAAATGCGTACTTGTGCTGAATTGCTAGAGAATTTAGCCGAATTGCTACTGCTCAGCTGGCTTCCTCCATGGCTGAAATGCAACGTGGCAATTATATGGAACTCTCGGAAATTCTGGCTCCGGTCAAACTATCGAACAAATCTAATAAAACTTTGGATTGCAACGAGGAATGCCGTCTACTCGAACGTAATCGCCGTTTGGCTATTGGTTTTGCAAATACGTAATCCCGATTTGCCACAAAAACTTCTAACAAAATATTcagattttataagaaattttgccAAACGTGACACAGCTTTGGTAAAGTCTATACATGATGCTCTAACTACTTTGGTTAAATTGGCAaaggaaagtaaacaaaaatcacGATCACACTCATTTCCTACAATGAATCGCGAAAAGAGCAATTGGTACATGAGATGTGCGAAATGTTTGGTGTCCGAATCGGTGGCCTATGATGCTGAACCAAATCGTAATGTGGTTGCTACGGCTTTTAAAGATCGctCTTGGCTTCCAGCTACAAGTATTATGGAAGTAATGGCTCGTGAGTCTGGTCAACGACGTGTACCAGTGCCCAGTAACAATGCCTGGGGCCTAAAGAGATAA
- Protein Sequence
- MKHNSRDQQQQQQQQQPGASKSSGAFNKNSRNGNGNGNGNGDKLRNNEAQTQNNNNNNNNSNNNNNKGDKNNANKRYQNGRRSQDFAEREDRYDRYIERGERSDRGHNQRNQQQRNDYHQRYDNYRSNKRRDDWNRNRDRINGFRVEEKYDNDNGKDSPLPSPEKKSPKKVYEKENEKLSQREKLIRDIETRRLECLVCVEPIKAHQGVWSCHNCYHILHLQCIIKWASSSKSDDGWRCPACQNVEKDVPRDYYCFCGKLKNPTNNRQDIAHSCGEVCGRIEGCPHACTLQCHPGPCPPCQAQVKRECGCGKTSKIMQCCVKEVIECDSTCEKLLNCESHTCQEKCHEGKCPPCKEKVDQKCHCSKQERQVTCTRESHDKHNYSCGKPCGKDLSCGNHKCKDCCHPGECRPCKLSPDFVTFAHGVKMPIIAGQRKSCLDPIPVCEGVCGKTLKCGKATNPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHFCPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKRPCSRKHPCDHPPQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGLACNKPLPCGRHKCIKTCHEGPCQVPGEICKQSCTTPRSTCGHKCMAPCHNGDCPDSPCKEMVEVQCECGNRKQMRTCAELLENLAELLLLSWLPPWLKCNVAIIWNSRKFWLRSNYRTNLIKLWIATRNAVYSNVIAVWLLVLQIRNPDLPQKLLTKYSDFIRNFAKRDTALVKSIHDALTTLVKLAKESKQKSRSHSFPTMNREKSNWYMRCAKCLVSESVAYDAEPNRNVVATAFKDRSWLPATSIMEVMARESGQRRVPVPSNNAWGLKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00922597;
- 90% Identity
- -
- 80% Identity
- -