Rfun021203.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rosalia funebris
Gene Symbol
dl
Assembly
GCA_037954035.1
Location
JAZFAV010000013.1:6398849-6421113[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.3e-75 6.8e-71 239.4 0.0 1 169 81 251 81 251 0.99
2 2 0.21 3.3e+03 -0.3 0.0 21 44 515 538 513 553 0.79

Sequence Information

Coding Sequence
ATGTTTTTAAGTGGCCAATGGTTTTCAATAAGGCCAAatACTACGACCCAAGATGATCAAGGCATGCGCGAtgataacaatttattaagTGATGTCATTGAAGTTATTGCCACTGATCCGGACTTCAGGGAGTCCACCGCACAAAAGAATACCAAAATGTACAACGGAGGCGGTGAAATCCCCGCTCCACAACCCACTCTGCAGCAACAGTCTGCTCAACAGTCACGAAGGCAAGCCTATGTGAAGATTATCGAACAGCCCGCTTCGAAAGCCCTTAGATTTCGATATGAATGCGAAGGAAGGTCCGCCGGATCGATTCCAGGAGCTTCCAGTACTCCAGAGAACAAGACTTTTCCCACAATACAAATCGTCGGCTACCAGGGCAGGGCCGTCGTCGTCGTCTCCTGCGTCACGAAAGACCCTCCTCACAGGCCACATCCACATAACTTAGTAGGTAGAGAAGGCTGTAAGAGAGGAGTATGCACGTTAGAAATACCTACCGACACAATGACTGTGCACTTCTCGAATTTAGGCATACAGtgtgtaaagaaaaaagatATAGAGCATGCCTTGAGAGTTCGAGAAGAAATCCGAGTTGATCCCTTCCGAACTGGATTCGGCCACCGTAATCAACCCACCTCGATAGACTTGAACACAGTGAGGTTATGTTTTCAAGTGTTTCTCGAAGGCGACACCCCCGGAAAGTTCTCTGTACCCCTGACGCCCGTAGTCAGCGAACCCATTTACGACAAGAAAGCTATGTCAGATCTCAGTATTATTAAGCTATCGGAATGCGTTAGTTACGTAAATGGCGGAAGACACGACATCATCCTGCTATGCGAaaaggtTGCAAAAGAAGATATCCAAGTAAGATTCTACGAGGAAAACGGCGACTGGGAGGCTTACGCGGAGTTCCAGCCGTCGCAGGTGCACAAGCAGCACGCCATCTGGTTCAAGACGCCGCAGTATAAAACGTTCGATGTGACGGAACCCGTAAAGGCTTTCATACAGCTACGCAGGCCCTCAGATGGCGCCACTAGCGAGCCGTTGCCCTTCCAGTTTCTGCCTCTGGATTCAGGTAGGCCACCATATTGGTTATTTAGAAGACATTTTGCCAAAAAGGCGAACTATAACTTGTTTAACACCATACTGGCAAACGACGCTAAGCTGGTCGCCAAGCGACAGCTGGGAAACGTCCCAGAGACCAACGAACAGGAGGCCGTCGTCGAAAATCCCGCCGTTACTGCGAGCTGGGGCGACAAACCGCAGGACAAGGTGACTGTTAGCAGCCCCAATAACTCGACTACGCTCTGGAGTGAGAGCATGGAAACTAACAACAATCAGAGCAACGTTGCGAATAAAGAACTAGATTACTCAGAGATTAAAAAGTTGAGGAAAGACGACGATGTGCCATTGCCCACAAACAGTAACTTGGAACAGAAGTCTTATAATGAGCTTATAAACCAGGTTGCGGAGCTAGACGAGATTTACTCCAGCACCCAGACTAGGCTTCTAAATGAATCATTGAAGGACGTTGCAAAGCCGTCTTTAGGGAATTTGCCAGAAAATGAGTCGTTTGACGACGCTAAAACTTACTCTAGCCTACAGCTCGCTTTCAAAAACCCTATTGAAATTCAAAGCGATGTCGTGGTAAACCCGATAAGTTTATTGCCCGCCAAAAGGGAAAACGAACCGGAAAGATTACCCCCTCTACCGCCCAAACGAACTAAGAAAATCGAAACTTATATAGGCGGCTCGATGACGAGCATACAACTGGCTGGCAAACCGTCGGATATTATTCTTCACAGGTCCAATTCGAGCCTCCGGGGCCCCACGGTTAGCCGGTCGCACTCGTTCAATTTACAGCGGCCCAAGTCGCAGTCCGAGCTGATTCCCCCGAGCAAACGCCTGCCTCCGACCCCGAACTGTTCGACCTTGCCTAACCCGAAAAAACGCGGCTTCCTTTCCAAGCTTTTCGGCCGCAAAAGCAAAACGCCCAGCAACTCGCGCGAGACCAGCGTCACACCCTCGACGAAAAGCAACGTTTATCCCAGTACAAACTCGCTGCAGGTAGGCAGCAACCTGGCTAAGAGCGCCGGCAACATATCAACGCACTCCGCCGGCAGTATACGTATACCGCTCAAGGACAGCCCCCCGGGCAGTAACCAGAACCTGGCGGCCCTCGACAGCCCCGGCCTCGGCATTCCGAGCGCCATGGACATCATGAACGACATGACCGACACTGAGGTCGAGCACTACGCTCTGTACACGACGATGGCGCCACATGCCACGCAAAGCGAGTTCGACGAGCTGTCTTTTTACTACGCCCCTGTTGAGGGTGGAAGGCTGTTGACTAACGCCGAGGTGCTAGCGAAATTGTACGCCGCCGATACTTAA
Protein Sequence
MFLSGQWFSIRPNTTTQDDQGMRDDNNLLSDVIEVIATDPDFRESTAQKNTKMYNGGGEIPAPQPTLQQQSAQQSRRQAYVKIIEQPASKALRFRYECEGRSAGSIPGASSTPENKTFPTIQIVGYQGRAVVVVSCVTKDPPHRPHPHNLVGREGCKRGVCTLEIPTDTMTVHFSNLGIQCVKKKDIEHALRVREEIRVDPFRTGFGHRNQPTSIDLNTVRLCFQVFLEGDTPGKFSVPLTPVVSEPIYDKKAMSDLSIIKLSECVSYVNGGRHDIILLCEKVAKEDIQVRFYEENGDWEAYAEFQPSQVHKQHAIWFKTPQYKTFDVTEPVKAFIQLRRPSDGATSEPLPFQFLPLDSGRPPYWLFRRHFAKKANYNLFNTILANDAKLVAKRQLGNVPETNEQEAVVENPAVTASWGDKPQDKVTVSSPNNSTTLWSESMETNNNQSNVANKELDYSEIKKLRKDDDVPLPTNSNLEQKSYNELINQVAELDEIYSSTQTRLLNESLKDVAKPSLGNLPENESFDDAKTYSSLQLAFKNPIEIQSDVVVNPISLLPAKRENEPERLPPLPPKRTKKIETYIGGSMTSIQLAGKPSDIILHRSNSSLRGPTVSRSHSFNLQRPKSQSELIPPSKRLPPTPNCSTLPNPKKRGFLSKLFGRKSKTPSNSRETSVTPSTKSNVYPSTNSLQVGSNLAKSAGNISTHSAGSIRIPLKDSPPGSNQNLAALDSPGLGIPSAMDIMNDMTDTEVEHYALYTTMAPHATQSEFDELSFYYAPVEGGRLLTNAEVLAKLYAADT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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