Rfun052661.1
Basic Information
- Insect
- Rosalia funebris
- Gene Symbol
- Bgb
- Assembly
- GCA_037954035.1
- Location
- JAZFAV010000034.1:24623486-24634251[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.16 4.9e+03 -1.2 0.1 100 113 6 18 3 25 0.80 2 2 3.9e-36 1.2e-31 111.3 0.1 86 164 58 135 39 138 0.90
Sequence Information
- Coding Sequence
- ATGTCATTAACAACTTTTTTAGTGAACATCTGGATACTCGTCAAGGGTTGGATCCTCACGGGGGCTGCGAACCCCCACGGGAGTTACTTTGAGTCGAACGCTGATCATTTCACGTGCCTGCGGGCGCCTTCCCATCCGAACCGCCCCCTGCGCGTCGCCAGAAACGCCATTAACTCTAAATCTCTTTTCCAGGTCCACATAAAATCCTCTTTTATTATGAACGGCGTCTGCGTGCGGTGGAGAGGCTGGATCGACGTCGAGCGCCTCGACGGCGTCGGCTGTTTGGAATACAACGAGGAGCGGGCGGCGCAGGAGGACGCCCTCCTCAGGGAGCAGATAGAGCGGTACAATCAGAGGCTGAGGGAGTTCGAGGATAAGCAGCGCGTCTACAGACAGGAGAGGCCCGAGCAGGACCTTGAGGTACGTCATGGGAGCATACCGTTACAGAGGCCGTACATGAAAATGTTCTAA
- Protein Sequence
- MSLTTFLVNIWILVKGWILTGAANPHGSYFESNADHFTCLRAPSHPNRPLRVARNAINSKSLFQVHIKSSFIMNGVCVRWRGWIDVERLDGVGCLEYNEERAAQEDALLREQIERYNQRLREFEDKQRVYRQERPEQDLEVRHGSIPLQRPYMKMF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -