Rped010291.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Riptortus pedestris
Gene Symbol
nfxl1
Assembly
GCA_019009955.1
Location
GWHBAZH00000004:112418602-112442048[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 1.5 1.4e+04 -3.7 1.9 14 19 163 168 163 168 0.83
2 19 0.3 2.8e+03 -1.5 0.4 4 10 199 205 198 205 0.92
3 19 2.8e-08 0.00027 21.0 16.6 1 19 213 230 213 230 0.99
4 19 4.7e-07 0.0044 17.1 15.9 1 18 266 283 256 284 0.85
5 19 1.4 1.3e+04 -3.6 1.0 6 10 309 313 308 313 0.88
6 19 3.7e-09 3.5e-05 23.8 15.8 1 19 319 337 319 337 0.99
7 19 0.95 9e+03 -3.1 3.4 5 10 365 370 361 370 0.71
8 19 3.1e-07 0.0029 17.7 10.1 4 18 375 389 374 390 0.94
9 19 0.062 5.9e+02 0.7 0.4 1 5 399 403 399 405 0.95
10 19 0.00013 1.2 9.3 15.0 1 18 425 442 425 443 0.91
11 19 1.6e-09 1.5e-05 25.0 15.2 1 18 452 469 452 470 0.98
12 19 0.73 7e+03 -2.7 1.3 5 10 498 503 498 503 0.91
13 19 0.00016 1.5 9.0 6.1 9 19 518 528 516 528 0.88
14 19 0.0005 4.7 7.4 6.3 1 11 537 546 537 547 0.95
15 19 2 1.9e+04 -4.8 6.0 14 19 575 580 575 580 0.93
16 19 0.031 3e+02 1.7 5.2 1 11 616 626 610 627 0.90
17 19 6.7e-06 0.063 13.4 18.4 1 19 654 671 654 671 0.97
18 19 1.6e-05 0.15 12.2 12.7 1 19 714 734 714 734 0.95
19 19 1.9 1.8e+04 -4.0 1.2 6 10 761 765 760 765 0.86

Sequence Information

Coding Sequence
ATGGATTATAGAAATGCTGTGGCTCCAAAAAAGAATAGAAAGCAAAATGAATCAAAGAAAAATCATCAAGGAAAGAGAGGAGAAAATTCTGGAGAAGCAAAATTTCGAGAGGCTCAGCTGAAACTTCAACTTCTTGTAGAAAAACATTTAGGTGACGGGAAAGATTCAGATTCATCAGAAGAGGAGGACAACTTAAAAGCAGATAGCATATTTGGATCTCTCATCCAGAACTACTCTCAATATGGTGGAAAAAAGGAAGATTTAGAAAGAACTCAGAATTTTCTGGAGAATGTGTTTCATTCTGGTGGTGCTGTTTGTCTTATATGTATTGCCACTGTGAAAAGAAATGACCAGATCTGGAGCTGTGTATCTTGCTATGGATTTTTTCATTTGCTTTGTGTTCAGAGGTGGGGGAAAGATAGTATTGCTCATCAGAAATTGGCTGCTGAAGATAGGCCTGGGGCAAAGCAGACAAACTTCAAATGGCAATGTCCTAAATGTCGAAAGGATTATGACTCTTCTGGCATACCCACAGCATATTACTGCTTTTGTGGCCAGAAAACAAATCCTGAGTTTCAGCCGTGGTTAGTTCCTCATTCTTGTGGAGATACATGCAACAAAGAGTTGGTTCCTGAATGTGGCCATCGCTGCCTGTTACTTTGTCATCCAGGTCCATGTCCTCCTTGTCCTAAAACAATTGATAGAGAATGTTACTGTAAAAAAGGAGGTAAAAGAAGGGTGAGATGCAGTGAAAAGGAATGGAGTTGTGGTTCTATATGTGGTAAAAGACTTGCTTGTAAACAGCATACATGTGTTGAGAAATGCCATCGTGGTGATTGTCCTCCGTGTGACAAAAAGTCGCTTATAACATGTGACTGTGGCTACCAAACTTCTCTCAAGAATTGTACTCAGCTCAAGTGGCAGTGTGATAAGGTCTGTGGGAAACCATTAAGCTGTGGAGAGCATAATTGCCAAAGAGTATGTCACAAAGGAGTGTGTGGCCCTTGTCCATTATCACTTCCAAGGAATTGCCCATGTGGACGTAATACTCTGCTACTACCTTGCTCCCAGGACATCCAGACTTGTGGAGAAACGTGCAGTAAGCCATGTGAATCAAATGAACACCTTTGCTCTCAGAGGTGTCATAGAGGCCCTTGTCCCCCATGTATGGAATTGATAGTGAGAACTTGTCGGTGTGGTAATCACAAAAAAGAAATTTCTTGTTATCAGAAAATGTATTTGTGTGAAGTTAAATGCAAGAGGATGCGTGATTGTAATGTACATCCCTGCAAACGTAAGTGCTGTGATGGAAATTGTCCTTCATGTGAAAAACCTTGTGGAAAAACACTTTCATGTGGTCATCATAAATGTTCATCAGTTTGTCATCGAGGACCATGTTATCCTTGTGATATATTTAAACAAATTTCCTGTAAATGTGGTTCTACAAAAGTTACAATTCCTTGTGGAGCTGAACGATATACAAATCCACCTAAATGCTCAAAACCATGCAAAAATCCTTCTAAGTGTGATCATCCAATAAGACAGGAACATCGTTGCCATTTTGGTGACTGCCCTCCCTGCAAACTGCCCTGTGGAAAACCAAGAGAATGTGGACATCCCTGTTCAGAAGTTTGTCATGCATCAGTTCTTCTTCCTAAGGAAAATTACAATCCAGCAACTCCATGGGATGTTGTTAACACACCATATGAATTAAGGAGGTTACCTTGCCCAGAATGTCCAGTCCCTGTGGATGTAAACTGTTTTGGTCAACATGAGGTCCTAAGCTTGCCTTGCTACAGAGCTAAGCCTCTTTCTTGTGGAAAACAGTGTGGAAGATTACTCCGTTGTACAAATCATGTTTGTTCTATACTCTGCCATGTTGTAGAGAATGCTCCTTCTCTGACAGAAAGTGGATCAAATTGTGATGAATGCACAGAAGACTGTAGTGTTGAACGAGAATGTGGACATCCTTGCCCACTACCTTGCCATCCAGGTGATTGTGATCCTTGTAAGCAAATTGTTAAAATCAGGTGCCATTGTGGTGTAGCACAGTTATTTCTATCCTGTGATGACTGGACTAATGCTGAAGACAAAAGTTTGCTTCAATCTTGTGGAAATCAGTGTCCTAAAAATTATGATTGTGGACATCGTTGTGTGGTTCAATGTCATAGTGGAGAGTGTCCTCAAACTGCTCCTTGTAGAAAGAAAGTAAAGGTGACATGCCCGTGTAGAAGAATAAAGAAAGATATTCATTGTCACCTTTCATTTCGGCAGTTGGAGTGTGATGAAACCTGTAATAAACTAAAAACTGAAAAGCAGAAGAAAGAAGAAAAAGAAAGGGAGGAAGCTCGGATAGCTGAAGAGCGCAGAAATCAAGAAGAACTTGAGAGATATGAAAAACGACTTCATGGTGGAAAGAGATGCCGAGAAAGACGTCGTATGGCAGAAAACAACAATGAGCCATGGGCTGCTGCAAATTTTTTCCTTATTGCTGGAATATCTTTTTTGATTGTTTCATTCCTGTCTGCATTCTATTTTTTCACTCTGTGA
Protein Sequence
MDYRNAVAPKKNRKQNESKKNHQGKRGENSGEAKFREAQLKLQLLVEKHLGDGKDSDSSEEEDNLKADSIFGSLIQNYSQYGGKKEDLERTQNFLENVFHSGGAVCLICIATVKRNDQIWSCVSCYGFFHLLCVQRWGKDSIAHQKLAAEDRPGAKQTNFKWQCPKCRKDYDSSGIPTAYYCFCGQKTNPEFQPWLVPHSCGDTCNKELVPECGHRCLLLCHPGPCPPCPKTIDRECYCKKGGKRRVRCSEKEWSCGSICGKRLACKQHTCVEKCHRGDCPPCDKKSLITCDCGYQTSLKNCTQLKWQCDKVCGKPLSCGEHNCQRVCHKGVCGPCPLSLPRNCPCGRNTLLLPCSQDIQTCGETCSKPCESNEHLCSQRCHRGPCPPCMELIVRTCRCGNHKKEISCYQKMYLCEVKCKRMRDCNVHPCKRKCCDGNCPSCEKPCGKTLSCGHHKCSSVCHRGPCYPCDIFKQISCKCGSTKVTIPCGAERYTNPPKCSKPCKNPSKCDHPIRQEHRCHFGDCPPCKLPCGKPRECGHPCSEVCHASVLLPKENYNPATPWDVVNTPYELRRLPCPECPVPVDVNCFGQHEVLSLPCYRAKPLSCGKQCGRLLRCTNHVCSILCHVVENAPSLTESGSNCDECTEDCSVERECGHPCPLPCHPGDCDPCKQIVKIRCHCGVAQLFLSCDDWTNAEDKSLLQSCGNQCPKNYDCGHRCVVQCHSGECPQTAPCRKKVKVTCPCRRIKKDIHCHLSFRQLECDETCNKLKTEKQKKEEKEREEARIAEERRNQEELERYEKRLHGGKRCRERRRMAENNNEPWAAANFFLIAGISFLIVSFLSAFYFFTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00757820;
90% Identity
-
80% Identity
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