Gacu020394.1
Basic Information
- Insect
- Gonocerus acuteangulatus
- Gene Symbol
- nfxl1
- Assembly
- GCA_946811585.1
- Location
- CAMPFD010001061.1:175546-191627[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.5 5e+04 -3.7 1.9 14 19 162 167 162 167 0.83 2 21 0.15 5e+03 -0.5 0.8 4 10 198 204 197 204 0.95 3 21 2.8e-08 0.00095 21.0 16.6 1 19 212 229 212 229 0.99 4 21 3e-06 0.1 14.5 17.6 1 18 265 282 255 283 0.87 5 21 0.57 1.9e+04 -2.4 0.9 5 10 307 312 307 312 0.94 6 21 2.4e-08 0.00082 21.2 15.2 1 19 318 336 318 336 0.99 7 21 1.3 4.3e+04 -3.5 3.6 5 10 364 369 361 369 0.78 8 21 2.9e-07 0.0098 17.7 10.4 4 18 374 388 373 389 0.95 9 21 0.97 3.3e+04 -3.1 2.5 1 11 398 408 398 409 0.82 10 21 0.00013 4.4 9.3 15.0 1 18 424 441 424 442 0.91 11 21 2.8e-09 9.4e-05 24.2 15.9 1 18 451 468 451 469 0.97 12 21 0.73 2.5e+04 -2.7 1.3 5 10 497 502 497 502 0.91 13 21 0.00016 5.3 9.0 6.1 9 19 517 527 515 527 0.88 14 21 0.044 1.5e+03 1.2 9.0 1 12 536 546 536 546 0.95 15 21 2 6.7e+04 -4.8 3.4 14 19 574 579 574 579 0.90 16 21 2 6.7e+04 -4.2 0.4 9 11 596 598 596 599 0.73 17 21 0.01 3.5e+02 3.2 5.3 1 11 615 625 609 626 0.90 18 21 1.5 5e+04 -3.7 0.5 14 19 639 644 639 644 0.81 19 21 2.7e-05 0.92 11.4 19.3 1 19 653 670 653 670 0.97 20 21 4.6e-07 0.016 17.1 11.5 1 19 713 733 713 733 0.96 21 21 0.047 1.6e+03 1.1 1.6 6 12 760 766 759 766 0.89
Sequence Information
- Coding Sequence
- ATGGATTATAGAAATGCAGTTGCACCCAAAAAGAGTAGGAAGCAGAATCCTACAAGAAAAGGCCAACAGTCTAAGAAAGGGGAAAACTCAGGAGAAGCCAAGTTTCGGGAAGCCCAGTTAAAATTACAACTTCTTGTTGAAAAGCATTTGGGAGATAAGCAGGATTCTTCCTCTGAAGAGGAGGAAGAtttaaaaactgaaaatatatttgGATCTCTCATCAGAAATTATTCACAGTTTGGCGGAAGAAATGAAGACCTGGAACGTACTCAGAATTTTCTTGAGAATGTTTTTCATTCTGGAGCTGCTGTGTGTCTTATCTGTATTGCCACTGTTAAACGAAATGATCAGATCTGGAGCTGTGTTTCTTGCTATGGATTTTTTCATCTATTGTGTGTGCAAAGATGGGGAAAAGACAGCATTGCCCATCAGAAATTGGCTGCTGAAGAAAGACCTGGTTTCAAGCAAGCAAACTTCAAGTGGCAGTGccCTAAGTGTAGAAAAGATTATGACTCCTGTGAGATTCCCACAACGTACTCCTGCTTTTGCTACCAAAAAGTTAATCCTGAGTTCCAGCCATGGTTAGTCCCTCATTCATGCGGAGAGACATGTAACAAGGAACTTCTTCCTGAGTGTGGTCATCGCTGCCTCCTTCTTTGCCACCCAGGTCCATGTCCTCCCTGCCCCAAAACAATAGACAAAGAATGTTATTGCAAAAAAGGAGCCAAGAAGAGAGTGAGATGCAGCGAGAAGGAGTGGTCATGCGGTTCTGTGTGCGGTAAAAAGCTAGCTTGCCAACAGCACACCTGTGATTCTCAATGCCACCGTGGTGATTGCCCTCCTTGCGGCAAAAAATCCCTCGTAACATGTGACTGTGGCAGTCAGACTTCCCTCAAATCATGTACCCAGCTTCAGTGGAAGTGCGATAAGGTATGCGGAAAGGCATTAGAGTGTGGAAAACACAAGTGCGAAAGAGTATGCCACAAGAAGGACTGTGGACCTTGTCCACTCTCCCTTCCGAGGACTTGTCCGTGTGGACGGAACACCCTCCTCCTTCCGTGCACACAGGATATATACACTTGTGGCGAAACATGCAGCAAACCTTGTGATTCTAATGAACACGTCTGTTCACAGAGGTGCCACAGGGGCCCTTGTCCTCCGTGTATGGAACTGATAGTAAGGACTTGTCGTTGTGGCCTTCATCAGAAAGAAATTTCTTGCCATCAGAAGATGTATATCTGTGAAGTTAAATGCAAGAGAATGCGTGACTGTAATGTGCACCCGTGCAAGCGCAAGTGTTGTGATGGGAATTGCCCTTCTTGTGAAAAACCTTGTGGAAAGACTCTGTCTTGTGGCCATCACAAATGTACTTCTGTCTGTCATCGAGGACCTTGCTATCCCTGCAACATAGTTAAGCAAATCTCCTGTAAATGTGGGTCAACAAAAGTAACAATTCCCTGTGGTGCTGAACGCTATACCAATCCTCCGAAATGCTCCAAACCTTGCAAAAATCCTCCTAAATGTGACCATCCAGTACGAGAGGAACATCGCTGCCACTTTGGAGACTGCCCTCCATGTAAATTACCCTGTAGGAAAGAAAGGGCCTGCGGACACCCGTGCACTGAGCAATGCCATACTGCTCTTCTTCTCCCTAAGGAAAACTACAACCCAGCAACTCCGTGGGATGTTGCAAACATGCCCTATGAATTGAGAAGGTTGCCTTGTAGAGAGTGTCCAGTGCCGGTGGACGTGAGCTGCTTCGGAGAACATGAGATCTTGAGCCTCCCGTGCCACCGAGCAAAGCCTATGTCTTGCGGAAACGAGTGTGGGAGACTTCTTCGTTGCACTAACCATGTTTGCAGCTTACCTTGCCATGTTGTTGAAAATGCACCTTCACCAAAGgaaagTGGATCAAATTGTGATGAATGCAGTGAAGACTGCAGTGTTGAGCAGAAGTGTGGACATCCTTGCCCACTGTCATGCCATCCTGGCCCTTGCAAGCCTTGTAAACAAATAGTAAAAATGAGGTGCCATTGTGGAGTAAATCAGCTGTTTCTCTCCTGTGATGAATGGACGAATGCTGAGGACAGCTCGGTACTCCAATCGTGTGGAAACCAGTGtcctaaaaatTATGAATGTGGCCACCGATGTGTTGCACTATGCCATACTGGTGAATGCCCTAAGACTGCTCCTTGCCGAAAGAAGGTAAAGGTTACTTGCCTTTGCCGAAGGATAAAGAAGGACATCCAATGCCACCTTGCTTGTCGGCAGTTGGAATGTGATGATACTTGTCATAAAATGAAAGCAGAACGACAAAAGaaagaagaaaaagaacgCGAAGAAGCTCGAATGGCTGAGGAACGTAGGAATCAGGAGGAACTTGAGCGTTATGAAAAGCGACTCCACGGAGGAAAGCGCTGTCGAGAAAGGCGTCGCATGGCTGACAATGACTCCGAGACTTGGGCTGCTGCAAATTTCTTCCTTATAGCTGGAATatcttttttaattgtttcatttctatccgcattttatttttttacactgTAA
- Protein Sequence
- MDYRNAVAPKKSRKQNPTRKGQQSKKGENSGEAKFREAQLKLQLLVEKHLGDKQDSSSEEEEDLKTENIFGSLIRNYSQFGGRNEDLERTQNFLENVFHSGAAVCLICIATVKRNDQIWSCVSCYGFFHLLCVQRWGKDSIAHQKLAAEERPGFKQANFKWQCPKCRKDYDSCEIPTTYSCFCYQKVNPEFQPWLVPHSCGETCNKELLPECGHRCLLLCHPGPCPPCPKTIDKECYCKKGAKKRVRCSEKEWSCGSVCGKKLACQQHTCDSQCHRGDCPPCGKKSLVTCDCGSQTSLKSCTQLQWKCDKVCGKALECGKHKCERVCHKKDCGPCPLSLPRTCPCGRNTLLLPCTQDIYTCGETCSKPCDSNEHVCSQRCHRGPCPPCMELIVRTCRCGLHQKEISCHQKMYICEVKCKRMRDCNVHPCKRKCCDGNCPSCEKPCGKTLSCGHHKCTSVCHRGPCYPCNIVKQISCKCGSTKVTIPCGAERYTNPPKCSKPCKNPPKCDHPVREEHRCHFGDCPPCKLPCRKERACGHPCTEQCHTALLLPKENYNPATPWDVANMPYELRRLPCRECPVPVDVSCFGEHEILSLPCHRAKPMSCGNECGRLLRCTNHVCSLPCHVVENAPSPKESGSNCDECSEDCSVEQKCGHPCPLSCHPGPCKPCKQIVKMRCHCGVNQLFLSCDEWTNAEDSSVLQSCGNQCPKNYECGHRCVALCHTGECPKTAPCRKKVKVTCLCRRIKKDIQCHLACRQLECDDTCHKMKAERQKKEEKEREEARMAEERRNQEELERYEKRLHGGKRCRERRRMADNDSETWAAANFFLIAGISFLIVSFLSAFYFFTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01310010;
- 90% Identity
- -
- 80% Identity
- -