Basic Information

Insect: Riptortus pedestris
Gene Symbol: -
Assembly: GCA_019009955.1
Location: GWHBAZH00000005:124429806-124440587[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.95 55 4.6 4.9 1 23 101 124 101 124 0.95

2 19 0.39 23 5.8 4.2 1 23 130 153 130 153 0.95

3 19 0.011 0.64 10.7 2.8 1 23 159 182 159 182 0.94

4 19 0.042 2.5 8.8 1.5 3 23 199 220 198 220 0.96

5 19 0.05 2.9 8.6 2.0 1 23 226 249 226 249 0.90

6 19 0.00049 0.029 14.9 2.9 1 23 364 387 364 387 0.94

7 19 0.005 0.29 11.8 1.2 1 23 393 416 393 416 0.96

8 19 0.00065 0.038 14.6 5.8 1 23 513 536 513 536 0.93

9 19 0.017 1 10.1 1.0 1 23 542 565 542 565 0.97

10 19 0.0072 0.42 11.3 1.7 1 23 747 770 747 770 0.93

11 19 0.046 2.6 8.7 1.6 1 23 776 799 776 799 0.96

12 19 0.0021 0.12 12.9 1.7 1 23 1006 1029 1006 1029 0.93

13 19 0.034 2 9.2 1.5 1 23 1035 1058 1035 1058 0.96

14 19 0.0021 0.12 12.9 1.7 1 23 1315 1338 1315 1338 0.93

15 19 0.034 2 9.2 1.5 1 23 1344 1367 1344 1367 0.96

16 19 0.0005 0.029 14.9 5.5 1 23 1626 1649 1626 1649 0.96

17 19 0.00085 0.049 14.2 4.2 1 23 1655 1678 1655 1678 0.96

18 19 4.7e-05 0.0027 18.1 1.6 1 23 1789 1812 1789 1812 0.96

19 19 4.2e-05 0.0024 18.3 2.7 1 23 1818 1841 1818 1841 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.95	55	4.6	4.9	1	23	101	124	101	124	0.95
2	19	0.39	23	5.8	4.2	1	23	130	153	130	153	0.95
3	19	0.011	0.64	10.7	2.8	1	23	159	182	159	182	0.94
4	19	0.042	2.5	8.8	1.5	3	23	199	220	198	220	0.96
5	19	0.05	2.9	8.6	2.0	1	23	226	249	226	249	0.90
6	19	0.00049	0.029	14.9	2.9	1	23	364	387	364	387	0.94
7	19	0.005	0.29	11.8	1.2	1	23	393	416	393	416	0.96
8	19	0.00065	0.038	14.6	5.8	1	23	513	536	513	536	0.93
9	19	0.017	1	10.1	1.0	1	23	542	565	542	565	0.97
10	19	0.0072	0.42	11.3	1.7	1	23	747	770	747	770	0.93
11	19	0.046	2.6	8.7	1.6	1	23	776	799	776	799	0.96
12	19	0.0021	0.12	12.9	1.7	1	23	1006	1029	1006	1029	0.93
13	19	0.034	2	9.2	1.5	1	23	1035	1058	1035	1058	0.96
14	19	0.0021	0.12	12.9	1.7	1	23	1315	1338	1315	1338	0.93
15	19	0.034	2	9.2	1.5	1	23	1344	1367	1344	1367	0.96
16	19	0.0005	0.029	14.9	5.5	1	23	1626	1649	1626	1649	0.96
17	19	0.00085	0.049	14.2	4.2	1	23	1655	1678	1655	1678	0.96
18	19	4.7e-05	0.0027	18.1	1.6	1	23	1789	1812	1789	1812	0.96
19	19	4.2e-05	0.0024	18.3	2.7	1	23	1818	1841	1818	1841	0.96

Sequence Information

Coding Sequence: ATGATGAGTAGGAGTGGGGGGGCTCTACTGGAGACTGAAAACTACAAAATCTCGTTTAATATTCAAGATAGTGAAAATATGTATCTAATAATAGTTATGGGCGCTGAAAAGAAAGAAATTGGTACAGACGAAGCTAGTCAAAATCGTCTTCATGGTGTACAGGAATTAGAGTGCTCTTCATCTTACATTCAGTGTTCGGATCCCCTGGCGGGGACTCAAGCATTGGACAAGCCGGCCCAGAATACTCAACACCACGACTCAAAATCTTCTCTTGGTAAATTAAGTGAAGAGGAAAGGTCATTTCTTTGTCCTTATTGCCAATATAAGAACACCAATTCTCATCACGTCAGGTCTCACATTTTGACAAAACACGCTGGCGAGAAACCGTTCTTTTGCCCTTATTGCAAATACCGCTGCCAACAGGGAAAAACGCTAAAATTACACATAAACTTGAAACACCCGCATAAAAAGCCATATGCGTGTAGCCTTTGCAATTACAGAAGTTCTCAATCCAATAACCTCTCAAGGCACTTACATCTAAAGCATTCCCTGACCAAAATTCGCTCTAAGCCCGTTAAACGGAAACCATTGCTTTGCCCCCTTTGCGATTACAGGTGCTCACAAGTCGGTAACATCAAATCTCATATTCGTTTCAAGCACTCCAAAGTAAAGCCTCACGCATGCGCCTTTTGTAAATACAGAAGTTCACAATCGAACAACCTAAGAAGGCACGTGGCATTGAAGCATTCCAAACAGAAACAGACGCGTATGTCTTCTAATTATAAAAAAGAAACTATCAAGACGAATAAGAAAATCACCGGTCCAGAAGACATTTCCTCAAATAACTATAACTTACAATGTTGTAACTATATTTCTCAGGTCAGTTCAGGCAAAAATATCGAAGATCCAGTAGATGAACTCTCCAACAACGCATCACAAGATGATCAACAGAGGTCAATAAAACAACCATCCAAAGGCTCTGATCTTAATAGCATCTTAATTGACCGGAACATCGATGATGACGTAACTCCTGAAAACACTGCTGATACTGATATTGTTGTGGAACAAGTACTTTCATTAAGTGGCCAATACAAATGCTCTTACTGTGACCACCGAAGCAGTCAGCCCGGCAACCTTAAGTCTCATATCTCTTTCAAACATTCTAAAGTGAAGCCTTATAGTTGTCCTTACTGTAGTTACCGAAGCAGCCTCTCTTCCAATGTAAATAGACATGTGAAGCTCAAACACTTTGACATTTTGACTTCATCAAATCAAGGAAGTCAATCTGGTAATAAGTCAGAATTCAATAATAACAAAAATGCCGAATTGTTTTTAAACGAGGAGTGTATTATGAGTGATCTCACCGATAATTCACAACTTGACAGCGTGAAAGCGGTTCCATTTGATGTGGCGGGATCAAACGAAACGCAAATAGACATGGACTCCAAACATCGAAATATAACTGAAGTAAATAATACAAACACTTGCAACCAATTGCCTTATTCTGTTCAAAACCACACCTTCCCTGAAAGAAAGTTTCAGTGCCCCCACTGTGACCACCGCTGTTCTCAGTCTGGTAATCTAAAGTCACATATTGCCTTTAAACACTCCAAAATCAAACCTTTTCGTTGCCCTTACTGCAGTTATGGGAGTTACTTCAGCGGGAACGTAAACAGGCACGTTAGACTGAAACATTTTCAGTTAGCATTTGAAACTATCAGAAGTGCACTAGATAGTACAATGCCCAATGATTCTATTCCATTGTCTAATCAGGCCAATCCTGACAGCAGTTTGCCGGAAGAAGCTAATGTCAATGATCGCTCAACTGAACTAGAAGACTCCGTTAATGTCGGCCCTTCAGAAGCCAACCTTTCTATCAACTTCATCACTGAATCCAGTTTCATAAAGAGCCCAACGCCCAAAATAAAAACTGAAAACAGTGACGAACAGGCCGTCTATCTCCCAAATAACAACTCTCGGGGTTTTTCTCTCGATGACAGTTCATCGGCACCAAGTTTCGTTAATTCTGAAAATACATCCACTATTTGTTCCGCCTTAAATGTAAATCTAAAAGAACCACAACTCGCTTCATGTAAAGAAGTCGGAAGTGACCATTCACTTAGTTTTCATCAAAGAGACATTATTGGGTTAAAAGATTCTACGAATTCAAAAATACAACTTTGGATAAAAAATAACAATAACCAAAACAACGATACAAAATGCCATCAAAACAGGAACTTCCAGTGTCCATATTGTGAACATCGAAGCACTCTATCAGGAAATCTGAAATCTCATATCGCTTTTAAACATTCAAAAATCAAACCCTTTCGCTGTCCACATTGCTCTTATGGTAGTTACTTGTCAGGCAATGTTAACAGGCACATCAAACTCAAACATTTTGACATTGGATCTGTTGCGAGTAATGTCTCCAAAATTCGAGATGAAATAGTTGATGATGCGAGTTGGAACTTGACAGGTTATGAAAACTCACTGACTATAACCTTTAACCCAAATGGGATAAAGTGTAGAAATAATATCGAAAATCGAGTTTCTTCCAGCCTTATTGATAAAGCAAATTTTAATGAGGAAAATGGAAAGCCAACTGCTAATAGTTGTGGTTCAAAAAAACAGGCAGAAATTGGCATAATTGAACAACCATCTTCATGTGACAACAAACCGGAAGGGTCTTTAAACGACTGCAAATTAGCAAATCAAAAATCAGATGAGTTAGTACCGGTTCGAACGAACACTCAAGAGAAATCTACCGGCCCCTCAAGCCTTCAAATAAAGCTTGAACCTCATTGTGACCAAGAAAATGACGTAGAGGTCGACTCTTTTGTTGAGAGTTCTTCGCGTCATAGTTCCTTGAAATCGGAAGATTCATCCTTAGATATGTCTAGGAAGGAAATCACCCATAAATATTCTCATTCTCGCAATGTGGATCTTATTGATACTCATGAACATTTATGGACCAATAATAAAGAACTCACAAAGACTGATAACCAATTAAGAAATTTTCAGTGTCCTTACTGCGATCACAGGAGTACGCTGTCAGGGAACCTTAAATCTCATATCGCCTTTAAACATTCCAAAATCAAACCTCATCGCTGTCCCTATTGTGAATATGGTAGTTACTTATCGAGCAATGTTACCAGGCATGTTAAAATCAAACATTCTGACGTTGGAACTATTCTGAACAATATTACAAAAAATCAGTACGAAGAAACTGGTAATAGTAATTCAGAATTCATCGTGGGCTCTAAAGATATTCCAGTTTTAACTTTGGAACAAAATGAAAGTCATTCCACAAATAATATACAATGTCAACATTCTTTATGTGCTCCTAACCCAAATGATGAGCCGAATGTTCCCTTGAAATTTGAAACTCCCGTAAACATTAAAAGGCGCTTTCCTGACCCGCCGGTAGAAATAGACTTAACGGAAGACACGTCGTGTGACGAAGATCAGAGCTCGGTGGAGTCAAAGCAGCCAAGAACGAGCTCTATAGAACATCCATTAAAGGGGCCAGAACATTCTTTTGCTGATACATCATTAAATGACTGTCACCACATTAACCAAGAATCAGATGGAAATAATTCTATTGATTTGACTTCTCAACCCCATTCAACTAGTGACACAATTGCGAATATAAAGCATGAAAACAAGGACCGCTGTACAACAGAAACTAAGTCTGAGGTCAGTTCTTTTAACGATCATTACTCTCTGTCTAGCTTTGTAGAGTCTGAAAACTCCTCCACCAACTATTCTGATTTCAATGAAAATCTTAATGAACAATTTGATGCTCAAAGATCAGAAAGTACTCACGACGATTCAGTAAGTTTTAGACCGAACGGAATCAATGTGACATTTGATCACGGAAATCCCAAACTACACTCTTGGCCAAGCCGTAATGATAGCACAAAGAATGACCAAAAAAGAAGTTTTCAGTGCCCATACTGCGATCACCGAAGTACGCTTTCAGGGAATCTTAAATCTCATATCGCGTTTAAACATTCTAAAATCAAACCTCATCGCTGCCCCTATTGTGAGTATGGTAGTTACTTATCGAGCAATGTTACCAGGCATGTTAAAATCAAACATTCTGCCGTTGGCCCTTTGTCGGCTAATACCGCTGAAATGCAAAACCATACAATTGATGATAATTCGGGCTTTTTATGTGTACCATCACCATTAAACCCTGTTGATCCGTGCGATTCCCAAAACGGTCTCGTGAAAGCAGAAGATCCTCTAAATATGACCGAGTGTTTTTCAGATACTAAGACTGAAATAAATTTTGTAGAAGACGTATCTTCATGTGGAGAAGGTCTTAGGACAGTGGAAACTAAAAATCTTGGAATGAATTTTGAGAAGTCATTACCCAATAAATTAGAACTTTTTGATATTGTTCCTGTAAATAAGTCTCAGCTGATTACTTCAAATTCAGAAGAAAACATGTTTATGCAAAGTACCAATGTGATATTGGCTGAGGATTCTCATTCCACTCATAGCAGTTCATCATGTGATACTATAAAATCTGAATACACTAAAGAGTCTGCTAATCCTCATGGCGCATTAAATAATGGCAGTGCCTTTCACAATCATAATCAAGTAGATTGCTCAGATTTGCCCACGTTAGAGAATAAAAATCATTTGAGTTACGAAGAAAATTTGTTGTTTAATAGTTCACCTTCTGGCTACGATCTCGGCGAATCTCCGCATACATCTGTCGCACACAACGAAACAAAAACGGAAGATATGAATCACATTAAAGTCGAAACTCACTCTCAATTTTTTTCCAAGGAAATGCCCGCACAACAAAATGGCTCCCAGAACTGTGATTTTCTCGATGCAGCTGTTAACTTTCAGGACAAGCCCTACCACTGCCCTTACTGCGAATATCACTGTTCTCAATCTAGTAATTTGAAAGTTCATATCGCATCTCGCCATTTAAAAGTGAAGCCTTTTCGGTGCTTTTATTGCAACTATAGTAGTTCTCAATCGAGTAACGTGAGAAGGCACTTGCGATTCAAACATCCAAATGCTTCATCTCAATCAGCAATATTAAAGGAGAAAATTTCTCCCCCGAATTGCAACGATGCCCGCTTGAACCCAAAATCTGACTTTCCGTATGATGAGTCAAATTATAATTTTAATAGCTCACATTCGAATTCCTGTGATTCCCGTGGCCCAGGCGAATTCCCTACAAGTCAAGACATATATTCGGAGGTGTCCGAGGTAACTGTTCACAACCAGGGAATACAATATACACCTGGAGAATATGAAAGCTCTTCGGGTACTATTTGTTTGGGTCAACATTTTCCTACTAAAACTATATCCGAACCAATGAAAATCACTAAAAGAGTGTACGAATGCCCTTACTGTGAGCACAAAACCTCACAGAGCAGTAATTTGAAGAGCCATATTGCTTCAAGACATTCAAATGTGAAACCTTATATATGTTCTTATTGCGATTATCGTAGTTCGCAGTCGAGTAACTTTAAAAGACACCTGAGGCTCAGGCATTCCATCGATCAGGTCCCAAAAACTAGATTTCAGCCACCGCATCTTCAAAGTCATCTTCTGAACGTAAGCTGGTGA
Protein Sequence: MMSRSGGALLETENYKISFNIQDSENMYLIIVMGAEKKEIGTDEASQNRLHGVQELECSSSYIQCSDPLAGTQALDKPAQNTQHHDSKSSLGKLSEEERSFLCPYCQYKNTNSHHVRSHILTKHAGEKPFFCPYCKYRCQQGKTLKLHINLKHPHKKPYACSLCNYRSSQSNNLSRHLHLKHSLTKIRSKPVKRKPLLCPLCDYRCSQVGNIKSHIRFKHSKVKPHACAFCKYRSSQSNNLRRHVALKHSKQKQTRMSSNYKKETIKTNKKITGPEDISSNNYNLQCCNYISQVSSGKNIEDPVDELSNNASQDDQQRSIKQPSKGSDLNSILIDRNIDDDVTPENTADTDIVVEQVLSLSGQYKCSYCDHRSSQPGNLKSHISFKHSKVKPYSCPYCSYRSSLSSNVNRHVKLKHFDILTSSNQGSQSGNKSEFNNNKNAELFLNEECIMSDLTDNSQLDSVKAVPFDVAGSNETQIDMDSKHRNITEVNNTNTCNQLPYSVQNHTFPERKFQCPHCDHRCSQSGNLKSHIAFKHSKIKPFRCPYCSYGSYFSGNVNRHVRLKHFQLAFETIRSALDSTMPNDSIPLSNQANPDSSLPEEANVNDRSTELEDSVNVGPSEANLSINFITESSFIKSPTPKIKTENSDEQAVYLPNNNSRGFSLDDSSSAPSFVNSENTSTICSALNVNLKEPQLASCKEVGSDHSLSFHQRDIIGLKDSTNSKIQLWIKNNNNQNNDTKCHQNRNFQCPYCEHRSTLSGNLKSHIAFKHSKIKPFRCPHCSYGSYLSGNVNRHIKLKHFDIGSVASNVSKIRDEIVDDASWNLTGYENSLTITFNPNGIKCRNNIENRVSSSLIDKANFNEENGKPTANSCGSKKQAEIGIIEQPSSCDNKPEGSLNDCKLANQKSDELVPVRTNTQEKSTGPSSLQIKLEPHCDQENDVEVDSFVESSSRHSSLKSEDSSLDMSRKEITHKYSHSRNVDLIDTHEHLWTNNKELTKTDNQLRNFQCPYCDHRSTLSGNLKSHIAFKHSKIKPHRCPYCEYGSYLSSNVTRHVKIKHSDVGTILNNITKNQYEETGNSNSEFIVGSKDIPVLTLEQNESHSTNNIQCQHSLCAPNPNDEPNVPLKFETPVNIKRRFPDPPVEIDLTEDTSCDEDQSSVESKQPRTSSIEHPLKGPEHSFADTSLNDCHHINQESDGNNSIDLTSQPHSTSDTIANIKHENKDRCTTETKSEVSSFNDHYSLSSFVESENSSTNYSDFNENLNEQFDAQRSESTHDDSVSFRPNGINVTFDHGNPKLHSWPSRNDSTKNDQKRSFQCPYCDHRSTLSGNLKSHIAFKHSKIKPHRCPYCEYGSYLSSNVTRHVKIKHSAVGPLSANTAEMQNHTIDDNSGFLCVPSPLNPVDPCDSQNGLVKAEDPLNMTECFSDTKTEINFVEDVSSCGEGLRTVETKNLGMNFEKSLPNKLELFDIVPVNKSQLITSNSEENMFMQSTNVILAEDSHSTHSSSSCDTIKSEYTKESANPHGALNNGSAFHNHNQVDCSDLPTLENKNHLSYEENLLFNSSPSGYDLGESPHTSVAHNETKTEDMNHIKVETHSQFFSKEMPAQQNGSQNCDFLDAAVNFQDKPYHCPYCEYHCSQSSNLKVHIASRHLKVKPFRCFYCNYSSSQSSNVRRHLRFKHPNASSQSAILKEKISPPNCNDARLNPKSDFPYDESNYNFNSSHSNSCDSRGPGEFPTSQDIYSEVSEVTVHNQGIQYTPGEYESSSGTICLGQHFPTKTISEPMKITKRVYECPYCEHKTSQSSNLKSHIASRHSNVKPYICSYCDYRSSQSSNFKRHLRLRHSIDQVPKTRFQPPHLQSHLLNVSW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01309968;
90% Identity: iTF_01309968;
80% Identity: iTF_01309968;