Rped018159.1
Basic Information
- Insect
- Riptortus pedestris
- Gene Symbol
- dmrta2
- Assembly
- GCA_019009955.1
- Location
- GWHBAZH00000001:100708574-100715233[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-29 4.8e-25 87.2 11.0 1 47 34 80 34 80 0.99
Sequence Information
- Coding Sequence
- ATGTCGCTACCGTCCGGTGTAGACATGTCAGCGCTGATGTCGGCCCAGCACGCCGTCTTCCCCCCGGCCTTCTTCCTGAGGGCGTCTGAGCGCTACCAGCGGACCCCAAAGTGCGCCAGGTGCCGGAACCACGGGGTAGTGTCTGCCCTCAAGGGCCACAAGCGATACTGCCGGTGGCGGGACTGTTCGTGTGCCAAGTGTACCCTGATCGCGGAAAGGCAGCGGGTCATGGCAGCCCAGGTCGCCCTCAGGAGACAGCAGGCGCAGGAGGAAAGCGAGGCACGCGAGCTGGGTCTAGTATACACAGAACCGCCGCTCTTACCGCCCCCTCCACAGCTACCAGGGGACGAAGAAAGAAGAGTACGTTTAATTTCATGTTTGAAGAAAGAGGAGCAATTTTAG
- Protein Sequence
- MSLPSGVDMSALMSAQHAVFPPAFFLRASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCSCAKCTLIAERQRVMAAQVALRRQQAQEESEARELGLVYTEPPLLPPPPQLPGDEERRVRLISCLKKEEQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00339900;
- 90% Identity
- iTF_00154543;
- 80% Identity
- -