Rped008392.1
Basic Information
- Insect
- Riptortus pedestris
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_019009955.1
- Location
- GWHBAZH00000004:11196074-11231478[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-96 2.3e-92 309.6 30.1 1 300 8 302 8 302 0.89 2 2 0.031 5.9e+02 -0.4 1.4 110 142 348 380 303 392 0.65
Sequence Information
- Coding Sequence
- ATGAATTTTGTCTATTTGCAGGCGGAGTCGAGGCTTGCTGCAAAGAGGCAGGCTCGAGCTGAGGCGAGGGAGATCCGGATGAGAGAGATAGAGAGGCAGCAGAGGGAGCAGGAAGAGTCCAGATCTGCTGGCCAGGTCTATGAGATAGGAACTACTAATGGGCTGCGAAGCTGTGGAAGGCAGAACAGCAGCGGGAGGCTCTCTGCTTCCAATAGTTACCACTCTTCCAGGCGGAGTTCCGAAGACTCGCTGGAAGAGACCTCCTCTCTCGGCCACATCAGGAGCGAGCTGAGGGAGGCGGAAGACAAGTTCCGCAAGGCGATGATCGGGAACGCCCAGCTTGACAACGAGAAAGCAGCCGCAGCCTACCAGGTCGACCTCTACAAGGACCGCCTTGAAGAACTCGGAGAGGAATATGCTCAGCTACAGAGGGAACATCGAGAAAAATGTCGGCAGTACGAGCAGATGAAGCGGGATTCAGAGAAGCTTGCTAAGGACCTCGCTTTAGCTGTTGCTGCTCTTGAAGAGAGAGATCGTCTCATTCAAGAGGAGGGCTTAGTAATAGTCGGAGGTGATGGCTCATCATCTAGTGAGACTGATGACGAGGGAGAGGACAAGCCTCGGAAAAGGCGAGGGGAAAAGCGAGCTCTCGTTTCGACGGAGAATGCCAACCTCTTAGCAACTGTCTCTGGATCTTTAGATGTGAGATTGAAGAAGCTAGCAGCCGAGCGTAACGAGCTCTCGGATGAGCTGCGCCACGTGAAGCTGGAGCTGGAGGAGGAGAGGAACCGGGGCCGAGGCATTGGTGCAGCTCCTTCAGATCTCGAAGATATTCAGAGAGAAGCTAATAAGCAGCTCGGGGATTATAAATTCAAGCTGCAGAAAGCTGAGCAAGATGTTTCAACTCTCCAAGCAACGGTGGCAAGGCTGGAGGGGCAAGTAAGCCGATATAAAACAGCGGCAGAAACAGCCGAGAAGGTTGAGGATGAACTCAAGTTGGAGCGGAGAAAGCTGCAACGTGAATTCTCAGGACCTCATTCAGACAATTCTACCAGTGGTCTCCTGTCCCAGCTGAGGGAATGCCAAGCTCGAATCGAGGAACTTGAAACATCGAACACTCATCTTCAGAGGCGTCTTGATAAGCTGAAAACTGCTAAATCTGCTCTCCTCAAAGATTTGTAG
- Protein Sequence
- MNFVYLQAESRLAAKRQARAEAREIRMREIERQQREQEESRSAGQVYEIGTTNGLRSCGRQNSSGRLSASNSYHSSRRSSEDSLEETSSLGHIRSELREAEDKFRKAMIGNAQLDNEKAAAAYQVDLYKDRLEELGEEYAQLQREHREKCRQYEQMKRDSEKLAKDLALAVAALEERDRLIQEEGLVIVGGDGSSSSETDDEGEDKPRKRRGEKRALVSTENANLLATVSGSLDVRLKKLAAERNELSDELRHVKLELEEERNRGRGIGAAPSDLEDIQREANKQLGDYKFKLQKAEQDVSTLQATVARLEGQVSRYKTAAETAEKVEDELKLERRKLQREFSGPHSDNSTSGLLSQLRECQARIEELETSNTHLQRRLDKLKTAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -