Rped015971.1
Basic Information
- Insect
- Riptortus pedestris
- Gene Symbol
- -
- Assembly
- GCA_019009955.1
- Location
- GWHBAZH00000006:107771156-107773390[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 4.2e-08 0.0004 19.8 0.0 28 89 9 73 2 114 0.69 2 6 5.2e-07 0.005 16.2 0.6 346 386 171 211 155 233 0.76 3 6 0.00049 4.6 6.4 13.1 413 513 268 379 233 380 0.55 4 6 0.14 1.3e+03 -1.7 4.0 203 264 418 481 388 505 0.58 5 6 1.8 1.7e+04 -5.3 12.8 150 256 430 533 417 552 0.50 6 6 2 1.9e+04 -6.6 24.5 78 243 514 666 490 692 0.34
Sequence Information
- Coding Sequence
- ATGAACTCTGAGCCGAGCCCTACATCAGGAGGCGCCCCTTTATTCGGCGCTCCAGTCAGGGTTACACCCGCACCCGGGGATAGAATCAGGCAGAATATTCAGAGTAAGCTCGGGGAATATGATAAAGTTAAGCACCTGCTTGAAGAGCCAAAGCAGTTGCTGGGCTTTGACGGTATTCCTCCGGCATCTCCGGCCCCTGGGCCCACGCCACCACCTCCCAGGCCCCATGAGTTCAAGAAGCCACCTCACCACTCCATTGGCCAGGGACGGCAGAATCACCATCCCACCAATAGAGCTGGTGGGTTCGTGAAGCCTGCCGATGGGAAGCCAGCCTATCACGGACGTGGCTTCTACCCTGGCCAATCTGTGAAGCACACTGAACCGAGGGCAAATGGTGTCGTAAACTCATCAAAAGGGCCGCCTTTGCACATGCCCAGGCCTCCCAACAGGAACACACATCGACCTCATCTTGATCTGCATCACAAGGACATGGGGCGGTCTACTGCTTCAACAAGTGACGTTGACCACATTTTAAAAGAAATGACGGAAGTGACACCTCCCCTGACTGCTATTGCTTCAACCCCGAGGAAGGAAGTGGATTCAAAATTCCATTTCACTCCAGATATATTTAGTCAGTATTCAGAGGCAGTGGAACACAAAAGTTCAGTGATATCACCGAGGATGGAATCACCACCTCCGATGCCGCTCTCACCACCGCCAGCTACACCCATTCCTCAGAAACAATACAAGCCACTTAATGAACTTGGAAGCAGAAATGGGCATGCTCAAAAATCATACAACGATGATTTTATCAGTGACTTGGCACTTTCTGAGGATAGTGAAGATGATGTAAAGATAAGTGAATGTCCCAAACCTCCAGTTCCTGAGCAACAACCCAGGATTGAACCAGAACCTTCACCAATTCCAACTATAGTCTTGACCTCTCCTCCTGCAAGTGTAGTCCCTGAACCTGAGAGACCTATGCCTACATCTCCCGAAGGAAGTTCATCTAGTGAATATTCAGGGACTGATTCCTCAGAAAGTGATTCAAGTACATCCCCTCCAGCTGCCACTCAAGACTACCCAAACCCCATTCCAGAGCAACCACAACTTAGTTGGGATTTAAAATCATTTCTCCAGCCACAAAAGGATATTTTGGAAAGAAAGCAACCAACTCCAGAACCCCAGCCAGCTGTAGAAAAGCCAAAACTTGAGGATGATTCAGAAATTATTCTCGGTGAGGTTTTGACTAAACCACCCCAACCTTTATTATCAAGTTTGTCAGATAGTGATGCAGAGAAAAAAGGAAAACCTAAGAGTTCAGGTAGAACAAAGAAAAGGAGGAGGGTTGTAAGGAAATCTCCTGATGTAAGGACTATAGCATCAGACAGTGAGGAAGAAGCAGAGGTTGTGCTATCAACTCCACCTTCTCCTAGACCTAGCAGAATCCCAGCTAAAGTCCCATCTGGAAGTGAAGGGGAAGTAAAATCCACTGCTAAACGAGAAAAGTCCACAAGAAAAAATCAGCTCACTCCTTCCAGGAAACCTTCTGTTGAAAGAGGTCGAAAAAGGACTCCTGCCACCTCAAGTTCAACTCCTAAAAGTCCTGAATCCGAATCCCCTACCAAGAGAGGTCGTAAAAGGCCAATGAAGCCTCCAGTGACACCAAATGATACTGATGAAGATTCTAAAAGAAAAAGGATTCCAAGTAATTCTGAATCAGATGATGGGCCCTCCTGGAATCATGCTCCTGTTTCAAGAAAGAGTAATAGACGAAAGTCTGCCAAAGAAAGTTCAAGTGAACGAACTAAGAGAGAATCCCCTTTCATCAGGATATCAAGTAGTGATGAAGAAGAAACCACTGTTGCAACATCTCCTTTGAAACCTGTCTCAAGAGTAGCCCCTGCCTCCTCTGGAAATAGGCCTCCAAAGGGGTCAAGTGAAAGTGATGCTGAAAAAGAGGAAAGCCCTCCAAAACTTGATTCTGATGGTCAAACTATTCAAGACAAAAAGAACAATGTAACATTCCTCCTCTTTCTAAGAAAAAAAAACAACAAAAAAAAAAAGGACCGTAGCCTACTCAGGATGTGGCTTCAAATCTTTGACATGCCATACTCCAGCGTCCTTTCCACTTGCATCCTGGATCTTGTAGGTTTGGCTTCCAGTCTGCTCCTTGACCACACCTACAACGAACTTCGGGGCCAGTTTCTTCGCAAACCTATTCCCAGCATCTGA
- Protein Sequence
- MNSEPSPTSGGAPLFGAPVRVTPAPGDRIRQNIQSKLGEYDKVKHLLEEPKQLLGFDGIPPASPAPGPTPPPPRPHEFKKPPHHSIGQGRQNHHPTNRAGGFVKPADGKPAYHGRGFYPGQSVKHTEPRANGVVNSSKGPPLHMPRPPNRNTHRPHLDLHHKDMGRSTASTSDVDHILKEMTEVTPPLTAIASTPRKEVDSKFHFTPDIFSQYSEAVEHKSSVISPRMESPPPMPLSPPPATPIPQKQYKPLNELGSRNGHAQKSYNDDFISDLALSEDSEDDVKISECPKPPVPEQQPRIEPEPSPIPTIVLTSPPASVVPEPERPMPTSPEGSSSSEYSGTDSSESDSSTSPPAATQDYPNPIPEQPQLSWDLKSFLQPQKDILERKQPTPEPQPAVEKPKLEDDSEIILGEVLTKPPQPLLSSLSDSDAEKKGKPKSSGRTKKRRRVVRKSPDVRTIASDSEEEAEVVLSTPPSPRPSRIPAKVPSGSEGEVKSTAKREKSTRKNQLTPSRKPSVERGRKRTPATSSSTPKSPESESPTKRGRKRPMKPPVTPNDTDEDSKRKRIPSNSESDDGPSWNHAPVSRKSNRRKSAKESSSERTKRESPFIRISSSDEEETTVATSPLKPVSRVAPASSGNRPPKGSSESDAEKEESPPKLDSDGQTIQDKKNNVTFLLFLRKKNNKKKKDRSLLRMWLQIFDMPYSSVLSTCILDLVGLASSLLLDHTYNELRGQFLRKPIPSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -