Basic Information

Gene Symbol
Zfhx4
Assembly
GCA_028565995.1
Location
JAOWBB010000005.1:1598377-1606706[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.022 3.7 9.2 0.2 1 23 335 358 335 358 0.92
2 14 0.019 3.3 9.3 2.5 1 22 437 458 437 461 0.92
3 14 0.037 6.3 8.4 0.6 1 23 473 498 473 498 0.94
4 14 0.0084 1.4 10.5 1.3 1 23 515 537 515 537 0.97
5 14 0.41 69 5.1 1.1 3 23 545 566 543 566 0.87
6 14 0.00061 0.1 14.0 4.5 1 23 651 675 651 675 0.92
7 14 0.0081 1.4 10.5 0.7 1 22 695 716 695 719 0.89
8 14 0.00079 0.13 13.7 0.2 1 23 768 792 768 792 0.93
9 14 0.016 2.7 9.6 3.6 3 23 874 894 873 894 0.96
10 14 0.43 73 5.1 2.3 2 19 1017 1034 1016 1039 0.91
11 14 0.00012 0.021 16.2 2.5 1 23 1686 1708 1686 1708 0.99
12 14 0.00055 0.093 14.2 0.3 1 23 1804 1826 1804 1826 0.98
13 14 0.0025 0.43 12.1 0.4 2 23 1969 1991 1968 1991 0.97
14 14 0.073 13 7.5 2.6 2 23 2224 2247 2224 2247 0.89

Sequence Information

Coding Sequence
ATGCGAAGCGTGGTTGCCGGAGGAGCGCCTCGTCATGCGCCGAGCTCGCTTTGCCACACGAGTTTTCCACCCTTCCCGAGCTCGGGGGGAGGAAAATGGGGTCGAACTCGGGATTCCGGGCCCCCCCCCGCGAGCTTTTCCCGGTTCCGATCAAGGCGCGCCCGCGGACCGGACCCGGAACCGAATGGAGAACCTTGCGATTCTCGCTGTGGTCAGCGCCGGAAACGTTTGACGAGGTTCTctgggaaaattgaaatgccTTCGACGGGTTTTCCGTTATTTCATCCGCGATTCAGGACCGAAGTTCCGAGTTCCGGCATTCAAATCTTCCGGTCGACGCACGCCTCCCCGTTTCCTTCCAGGTCGCGAGCACCTCGACGCGAAATTCCCGTTCGACCTCAATGCGagaccgggaaaattttcagCCAGTGGTGGCCGTTTCTGTCATTCATCGTTTTACTTTCCGGCCAAAGAATGTTTTGCTGGACAAAAGCCGCGGCCGATGGCAGCACTTTGACCGCAAGGAAGAAGGAAGTTTTGACGGCCGATCGTTGCATCGGCGTAGCTGTTCCCCGTGCAGTTTTCTGTCGCCGGTTTTGGGTCGGGAACAAACGGaagagttttcattttccgtccGCGATCTTTTGGGCTTGCTGTCGGAGAAATGGCGATGACGTGGCGCCTGCCTCGGCCTCGCGGAGGCCACTCGGTGCGATTGACTTTTGTGTTTCTTTTCTTGCAGAGAGGAAGGACGGCCAGTCCGTTGGCAGGGAAGGCGGTAAGCAGGAGAGCGCGGAAGACGAAATTGGCGCGTCCTCCGATGCGCAGGCCCACGTGTGCCCCTATTGTAATTACATGAACACCTCGGAAATACGAATACAGGCTCACGTTCTGGCACAGCATTCGCAGTCCGACGGCGGCGGTCGGAGATCGTCGTCTCCGCCTCCGTCGGTTTCGACCCAgcaacagcagcagcaacagcaGCAGTCCCAATCGAAGGATTTCCTCTGCCCGCTGTGCCAGGACGGCTTTCGCGAGCGCTCCTCTCTCGAACGTCACGTTATGCAAATTCACAGCGTCAATTCGGAAGGCCTGCAAAGACTTTTGATGCTCGTCGATCAGTCGCACTGGCTGAACGCGGTGAATCGCAGCTCGTCACCGCATCAACCGAATCACATGAGCCCCGGCAGCAGTGGCGGAAGCACCTCTTCCCACTGCAAAGAACTCGAGAAGCCGACGGATTCGACGGAGGAACGCGACGAGCCAACGCTTCTGTCTCCCGTCTCGGAGGAAAACCTGGACGAGGAGTATCGCTGCCAGACTTGCTTCAAGAATTGCAAAACGCTCGACGACTTGTACGTTCATCAAAACGAGCTGGGCCACATCGAGATCAAGCAAACCCCGACCGGGCCCGGTTACGTGTGCTGGAAAAAGGGATGCAACCAATACTTCACGACCATCAACACGCTTCAGCTGCACTACAGGGAAATCCACATAAAAAACCAACAGAACATGTCCGTTTCCGAAAAGCACGTGTACAAATATCGGTGCAACCAATGCAGCCTCGCCTTCAAGACGGTCGAGAAGCTTCAGCTGCACTCCCAGTACCATCTTATTAGAGATGCCACGAAGTGCATACTCTGCGGCAGAAACTTCAGATCCATCATCTCCCTTCATAAGCACGTCGAACTGAACCATTCCGATCTCTCCGAAGAGGAGCTCAACAACTACAAACAGAGCTTGATGAGCAATCCTTTGATACTTGCTAGTCTCAGCGGAAACATTCTCGACCCGTCCCTGAACGAGATTTTGAAGAAGGAGTCCCTGGAGGACGAGGAGGAACCCGTCGACGACAACAGCGACGATTCCTACAAAGAGCAGCAATTCCTCGAGGACTACCTCAACAGCCAGTCAATAGCGGAAGACAGCTACAAAGATCCGAACCGCAAGTACAAATGTCACAAATGCAAGCTGGCGTTCACGCGCCAAACCTATCTTACCAGCCACAACAAGACGCTGTTGCACAGGAAAGGGGAGAAAATGAACTACCCGATGGAGAAGTACATGGATCCGAACCGACCGTTTAAATGCGACGTCTGTAAAGAAAGCTTCACCCAGAAGAACATTCTCCTGGTTCACTACAATTCGGTGAGCCACCTGCACAAGCTGAAGAAGGCGATGCAAGAACAGCAGACGAACAGTAACTCGGTACCCACTGCTCTGCTTGGGGTGACGTCGCCTCCGTCATCCCTGAACCTCACTAAATCGTCCGTGTCCTCGGAAGAAGAGGACAAGAAACCGTACAAGTGCAACATCTGCAAGGTGGCTTACAGTCAGGGTTCGACGCTGGACATTCACATGCGATCGGTCCTGCACCAGACGAGAGCGTCAAAACTCCAGGATCTCGTCATTTCCGGTCAGATAGACATTAACAAGCCGCTGTTCGAGCAGCCGCTGCAGAAGGCCGACGGCAAAAAAGCGAACGAGTTCATCACCTCTCCTCCCGGGCAGAAACTTTTCGCTTCTCCCGCCTCGAGCAGCTCCTCCAATCAGCAGGGGTCCTCGCCCGTCAATCCCATCTCGCCGAAACCGGACGGGGAGGAGAAGGAAGTTCCTTCGTGCCAAAGATGCAACGCCTGCTTCCACACCCAAGAGCAACTGGCGGCCCATCAGCAGCTCCATTGCCTCTTCGGAAGCCCCATGAGCCTGTTTCCGGCGCTGACGAACTCCACTCCGAACCGCGTTCTGTCACCGCCGCCTCCGAAGTCCCCGGCAACTCCAGACGAACTCAACAGGTTGAACCTTCCCAACAAGAAATGCTCTCAAATGTACAAGCACTTGCTCGAAAGCTTCGGATTCGATCTCGTGATGCAGTTCAACGAAAACCATCAGAGGAAGCGGAAGGAAAGGGAAGAGGCGGAGAAGCtggaaaaagagaaggaatTACTGAGTCAGAGCGAAGCCGTCGACCCGCAGGAGAGCGACGAATTTCGCGACAAAACCGCGGAAGAGGGCGACACCGACCTACCGGAAGTGAATTGCAAAAGCACTTGCCAGCACTGCCAGAAGCAATTCTCGAGCGTGTGGGTGCTCAAAGCCCACTGCGAAGAGGTTCACAAAGAGCTCGTGCCCATCGATTTCTTGGAGAAATACGCGGAAGAATTTAAAACGGAATACGAGAAGAAAACGGCCATTGCGACGACGGTCACTACGACCACGACAACTGCGATATCCACGCCGAACACGAGCACCTCCATGTCGACGTGCACGGTCACCAGCTCCGGCATAGACGTGACCGGAGACAAGGACGAGTCCAAAGACGGCAAAAACGACGAGGTGACGCCTCCGACGGCGTCCTCGACCCCCGCCAGCAGCACCGATTCGATTCCCACAGCGATTTCCGGCCTCAGCCCCGGGGTCGCGAATCCCATTCAAATGTCGCTCGCCCAGCAAATGAACGAAATGCAGGCGGCGTTCAACGCGATGGCCGCGTCCCAGCTTCAGCAGCAACTGCAGCAGTTCAGTCCGATGATGATGGGGATGGCCGGTCTCGGCATGGGCCTGCCCCTCGGACTCAACATGCCCGCTCTCGCGGCGATGAACCTCCAGCCACCTCTCGTTCCGATGATGATGCCACCGCCTCCGTTCGATCCCGTCTCTCTTGCGCAGGCCCAGGCTCAGGCCCAGGCACCTCCGATATTTCCCTCGCAGGGCGGGATCGATCCGGCAGCGGCGCTGATCGCCAAGCAGCAGCAGCACCTGCTTCAGCAGCAGCAACAAGCGgcaTCCGCGGCCCAGCAGAAGAGAGCGCGGACCAGAATCACGGACGACCAACTGAAGATCCTCAGAGCTCACTTCGACATTAACAACTCGCCGTCGGAGGAGCAAATCCACGAGATGGCGGCGCAAAGCGGACTGCCGCCCAAAGTTATAAAACATTGGTTCCGGAACACTCTGTTTAAGGAGCGCCAGCGAAACAAAGACTCCCCGTACAATTTCAACAATCCTCCTTCCACGACGCTGAATCTCGAGGAGTACGAGAAAACGGGCGAGGCAAAGGTGATGCCCCTGAGCGGCAGCGGCGACGAGCAACTCCCGTCCGGATCTCAGAAGGAAAGCTCCCAGAGACCCCCTTCGGCGGCCTCCTCCTCGAGTCCGGTGAAGAAAGAGTCCTTGGCCGGCAAAGTCGGCGCGGTGCAAGGGCAGTCGCAGCAGCAGGCGAATCAGCAACAGGTTTCTCGCACTCCGCCGCCGCCCTTTCTCGACCCCCCGCAGATAAAATCGGAGCCGCGGGATCGGGAGCTGGTGACGCCGACGCACGAAACCGAAAAGTTCGGTTTTCTGGACGAACATCGCGGACGAGTGAGGAGGGACAGCGTCGACAGCTACGACGAGAAGCCGAACTTCCACAGCCCCGTCCACCACTTTCCTCCGCAGAGTCCGCACTCTTTGAACCACAACGAAGCTCAAGTTCCTCAAAACTTATCAAGTTCCTCTCCTAATGGCCTTAGTTTATCTAATATTATGCCGCAAGTCGGCCCCGAATCGCTCGCCGGGAACCTGCCGGCAAACTTATCCATGTCTCAGAGCAACATGTTGCCTCCGAAGTTGACACCTCCGAACTTCGCGTCTCCGAATCAAGTTCCTAATTCAAGTGCCATTGTATCGATGCCGACTTCGAGATCCGTCTCGCCGGCCCGCTCGAACGCACAAGACTTCTTCCCCCATTCGGCGCTCGGGGGCGGCGGAGGAAACAGCAACGGCAGCAACTCCTCGGGAGGATCGACCTCGGGGAAACGGGCGAACAGAACGCGATTCACGGACTACCAGATCAAAGTGCTCCAAGAATTCTTCGAAAACAACGCGTATCCCAAGGATGACGATCTCGAGTATTTGTCGAAGCTTTTGAGCCTCAGTCCGAGGGTGATAGTCGTGTGGTTCCAGAATGCTCGGCAGAAGGCTAGGAAGGTGTACGAGAACCAGCCCCCCGTGGAGCCGGCTCCGGGGGCCGACGGTAACGAAGCGGGTCGGTTTCAGAGAACTCCGGGACTGAATTACCAATGCAAGAAATGCCTGCTGGTATTCCAGCGGTACTACGAGCTCATAAGACACCAGAAGACTCACTGCTTCAAGGAAGAGGACGCGAAGAGATCGGCCCAGGCTCAGGCCGCGGCGGCGCAGATAGCGGCCGTTTTGTCCAGCGAGGACTCCAACTCGAGCACCATCGAGAACCAGCAGCAGCATCAGAACCAGCCGGGCATGTCGACCTCCTCCTCCATACAGAGCAATCCCCCGACGCCTTCCGCGCCCGTCACTCCCACGCCGTCGACGCCGTCGCAAGTCCTTTACCCACCTTCTCCGGCTCCTTCCGGCACTCCGACTCCCGAAGCCAGCGGCAAAGATGGAACCTTCCAGTGTGATAAATGCAACTTGGTGTTTCCGCGTTTCGATCTCTGGCGGGAGCACCAGCTAGTCCACATCATGAACCCGAATCTGTTTCCTACCTATCCGCCGGACAGCCCGTTCGGGATCCTTCAGCAGCACGCTCAAATGCAGCACCAGCAGCAGCTCTCCGGCATGAGCGTCGACCTGTCCATCAACTCGCAGCAGCACTCCCTCGCCGCGATGCTCTCGAGCAAGAGAAAATTTGACGATTACGACGACATGTCCGACACCGGGGGCGACCAGCCGAAGGACAAGAGACTTCGCACGACCATATTGCCGGAGCAGCTGGATTACCTTTATCAGAAGTACCAGATCGAGAGCAATCCGAGTCGAAAGATGCTCGAGAGCATTGCTCGAGAAGTCGGGCTGAAGAAAAGGGTGGTTCAGGTGTGGTTCCAGAACACCCGCGCCAGAGAGAGGAAGGGCCAGTTCAGAGCGCACGCGCAAGTCATAAACAAGCGCTGCCCCTTCTGTCCGGCTCTGTTCAAAGTGAAATCGGCGCTGGAAAGCCACTTGCAGACAAAGCACTCCGATCAGTACGCGAGGGGAGAAATCAACATCGATTCTTTGCCGGACGAGGAAGTCAGCATGGAATCCGTGTCCAACTTCCAGCAGGGCAACAGCAACTCGAACTCCGGGATTCCTCAGCTGTTCTCGTCTTTCAACTCGGACATGGACtccatcaaaaaatattacgagGAATCCATGAAGCGATACATGAGCGAGCTGCAGCAGAACCAGAACGGCGAAAAATCGGAGGAACGGGGAGAGTATCCCCTGGACCTGAGCAAACCGGTCGACCTCAGTCGCCAGATGAAAGTGAGCATGGACGACACGTCGAGAATCGTCGACGTCGGTCCTCTCACGGATCTCAGCGAGAAAAGCCTCAACGACGACGATTCCACTTCGGAAACGACGGAAATGTATTATTACGACGACAGCAATCCCGTATCCCCGGCCTCGAGCACCCAGAGCAACCACCAAAGGCAAAACAAAAGGTTTCGGACGCAGATGAGCAACACCCAGATCAAGGTGATGAAGTCCCTCTTTAACGATTACAAGACTCCGACCATGTCGGAATGCGAAGTTCTCGGCCGCGAAATCGGGCTCCCCAAACGGGTTATCCAGGTATGGTTCCAAAATGCCAGGGCCAAAGACAAGAAAGCGAAGATTTCGGGACAGAAAGCGGGCGAGGAGAGCATCGCCGGTGAGAAACTAGTCGAAGAATGCAAATTGTGCGATTTCAAGTACTCGCACAAGTACTCTGTCCAGGACCACATCTTCACCAAATCTCACATCGAGAACGTCAAGTCGAGCGTCGAGCAGGAGACGaccggcggcggcggcggcagcGGCGGCGGCGGAGACCAGGACTTCACCGTGCCCCCGGTGCCGGGATCCAGctcggcggcggcggcggcggatCAAGCGTCTTCGGTCGTCAAtcacaacaacaacaacaccACCACGAACCAGCATCTCGCCCAGCTGCAGATACTCCAAATGGCGGCAGCGATGAAGGACAAAATGCCCAGGCCCGAGGAGATGGCCCAGATCCAGATGCTCCAGCTCGCGGCCGCCTCCGGCCTGATGATGAAGACGGACGAGAAGAAGATGGACGACATAGCCCACATCCAGCTTCTCCAAATGGCAGCGGCAAGCGGACTGCTCCCCAAGATGGACCCATCCGCCAGCAAAGAGCTCAAGGACGAGATGGCCCTCCTGCAGCAGCTGTACACCCTTCCGGGATTCATGCATCCATCCATGGTCAACTCTTCGGCCGGTGAGTctgaattttag
Protein Sequence
MRSVVAGGAPRHAPSSLCHTSFPPFPSSGGGKWGRTRDSGPPPASFSRFRSRRARGPDPEPNGEPCDSRCGQRRKRLTRFSGKIEMPSTGFPLFHPRFRTEVPSSGIQIFRSTHASPFPSRSRAPRREIPVRPQCETGKIFSQWWPFLSFIVLLSGQRMFCWTKAAADGSTLTARKKEVLTADRCIGVAVPRAVFCRRFWVGNKRKSFHFPSAIFWACCRRNGDDVAPASASRRPLGAIDFCVSFLAERKDGQSVGREGGKQESAEDEIGASSDAQAHVCPYCNYMNTSEIRIQAHVLAQHSQSDGGGRRSSSPPPSVSTQQQQQQQQQSQSKDFLCPLCQDGFRERSSLERHVMQIHSVNSEGLQRLLMLVDQSHWLNAVNRSSSPHQPNHMSPGSSGGSTSSHCKELEKPTDSTEERDEPTLLSPVSEENLDEEYRCQTCFKNCKTLDDLYVHQNELGHIEIKQTPTGPGYVCWKKGCNQYFTTINTLQLHYREIHIKNQQNMSVSEKHVYKYRCNQCSLAFKTVEKLQLHSQYHLIRDATKCILCGRNFRSIISLHKHVELNHSDLSEEELNNYKQSLMSNPLILASLSGNILDPSLNEILKKESLEDEEEPVDDNSDDSYKEQQFLEDYLNSQSIAEDSYKDPNRKYKCHKCKLAFTRQTYLTSHNKTLLHRKGEKMNYPMEKYMDPNRPFKCDVCKESFTQKNILLVHYNSVSHLHKLKKAMQEQQTNSNSVPTALLGVTSPPSSLNLTKSSVSSEEEDKKPYKCNICKVAYSQGSTLDIHMRSVLHQTRASKLQDLVISGQIDINKPLFEQPLQKADGKKANEFITSPPGQKLFASPASSSSSNQQGSSPVNPISPKPDGEEKEVPSCQRCNACFHTQEQLAAHQQLHCLFGSPMSLFPALTNSTPNRVLSPPPPKSPATPDELNRLNLPNKKCSQMYKHLLESFGFDLVMQFNENHQRKRKEREEAEKLEKEKELLSQSEAVDPQESDEFRDKTAEEGDTDLPEVNCKSTCQHCQKQFSSVWVLKAHCEEVHKELVPIDFLEKYAEEFKTEYEKKTAIATTVTTTTTTAISTPNTSTSMSTCTVTSSGIDVTGDKDESKDGKNDEVTPPTASSTPASSTDSIPTAISGLSPGVANPIQMSLAQQMNEMQAAFNAMAASQLQQQLQQFSPMMMGMAGLGMGLPLGLNMPALAAMNLQPPLVPMMMPPPPFDPVSLAQAQAQAQAPPIFPSQGGIDPAAALIAKQQQHLLQQQQQAASAAQQKRARTRITDDQLKILRAHFDINNSPSEEQIHEMAAQSGLPPKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGEAKVMPLSGSGDEQLPSGSQKESSQRPPSAASSSSPVKKESLAGKVGAVQGQSQQQANQQQVSRTPPPPFLDPPQIKSEPRDRELVTPTHETEKFGFLDEHRGRVRRDSVDSYDEKPNFHSPVHHFPPQSPHSLNHNEAQVPQNLSSSSPNGLSLSNIMPQVGPESLAGNLPANLSMSQSNMLPPKLTPPNFASPNQVPNSSAIVSMPTSRSVSPARSNAQDFFPHSALGGGGGNSNGSNSSGGSTSGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLSLSPRVIVVWFQNARQKARKVYENQPPVEPAPGADGNEAGRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQIAAVLSSEDSNSSTIENQQQHQNQPGMSTSSSIQSNPPTPSAPVTPTPSTPSQVLYPPSPAPSGTPTPEASGKDGTFQCDKCNLVFPRFDLWREHQLVHIMNPNLFPTYPPDSPFGILQQHAQMQHQQQLSGMSVDLSINSQQHSLAAMLSSKRKFDDYDDMSDTGGDQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLESIAREVGLKKRVVQVWFQNTRARERKGQFRAHAQVINKRCPFCPALFKVKSALESHLQTKHSDQYARGEINIDSLPDEEVSMESVSNFQQGNSNSNSGIPQLFSSFNSDMDSIKKYYEESMKRYMSELQQNQNGEKSEERGEYPLDLSKPVDLSRQMKVSMDDTSRIVDVGPLTDLSEKSLNDDDSTSETTEMYYYDDSNPVSPASSTQSNHQRQNKRFRTQMSNTQIKVMKSLFNDYKTPTMSECEVLGREIGLPKRVIQVWFQNARAKDKKAKISGQKAGEESIAGEKLVEECKLCDFKYSHKYSVQDHIFTKSHIENVKSSVEQETTGGGGGSGGGGDQDFTVPPVPGSSSAAAAADQASSVVNHNNNNTTTNQHLAQLQILQMAAAMKDKMPRPEEMAQIQMLQLAAASGLMMKTDEKKMDDIAHIQLLQMAAASGLLPKMDPSASKELKDEMALLQQLYTLPGFMHPSMVNSSAGESEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01307852;
90% Identity
iTF_01308240;
80% Identity
iTF_01308516;