Rmar005697.1
Basic Information
- Insect
- Ricinus marginatus
- Gene Symbol
- RCOR3
- Assembly
- GCA_028565995.1
- Location
- JAOWBB010000009.1:196259-208401[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5e-08 4.7e-05 24.4 0.0 3 46 130 173 128 173 0.96 2 3 1.7 3.2e+03 -0.7 0.1 36 44 247 255 241 256 0.87 3 3 8.9e-14 1.7e-10 41.8 0.0 3 46 353 396 351 396 0.97
Sequence Information
- Coding Sequence
- ATGGTTttagctgaaaaaaataatagtaatatcaAGAATGGGCAGAGATCGCGGGGCCCTAGCCCTAATGGAAATGGGGGTCCTAGTCCTGTGTCGCCTATCGATGATGAAGGggaaaagatTCGAGTAGGGAGAGATTATCAAGCAGTATGCCCGGAATATATCCCAGCAGAAGAAAGAAAGCCAGACAGTGAAACGAATGACAGAGCTCTATTAGTATGGTCTCCATCAAAGGATATTTCTGATGATCAAtTGGATAAGTACATTCAAattgcaaaggaaaaatatggCTACAATGGAGAGCAGGCTCTAGGAATGTTATTTTGGCACAAACACGATTTAGAGAAGGCTGTTTTAGATTTAGGTAATTTCACGCCGTTTCCCGATGAATGGACAGTTGAAGATAAAGTTCTTTTTGAACAAGCATTCACATTTCATGGGAAGACCTTTCATAGGATTAGGCAAATGctgcCGGATAAGTCAATGGGCTCCTTAGTGAAGTATTATTATTCGTGGAAAAAAACTAGAACTCGGACTTCATTAATGGATAGACAGGCTAGGAAGTTGGGTGGCGTGAAAGAAGAGACCAGTGAATTAGGAAGCGAGCAAGGCTCAAACACAGATTctgaaaacgaagaaaagAAAGAGAATGGAGAAGTAAAAGAGGTCAAGATATATTGTACCAACTGTGGGATCCCCTGTACCATGACAAAATCTACTCCGAAAGGGATAATGTGTAACACATGCTATTTGCACTGGAGaaaaacgGGAAATGTTCGCCCGACAACCGGTCCGTTAAGAGGTCGTGACAGACACAGTTATAatgtattcaaaaaaaaagcgaaacctCCAAGAGGGATGCATATTGATCATGAAGATTTGGTTTCCCTCGCTTCACAGCATTctcagaatttatttattaatttagaccGCGAGATTGCCTCCCTGAAACGACAGgtacaaaataataaacaaacaCTGGGGagtatgaaaagaaaactaaatgaTAGTATCCAAGAATTACGTCCAGCTGAGAATTTTTCACGTATTAATTCACGTTGGTCAAACGAAGAACTTTCTTTGGCTGTTCAGGgCGTAAGAAAATATGGTAAGAACTTTAAAGCTATAGCGGAAATCATTGGCACGAAAACCGAAGCTCATGTGCGTAACTTCTTCGTAACTTACAGAAAAAGGTACAATCTGGATGTAGTGCTCAAGGAATATGAGGCCGATAATGGACTTATTATTGACATATCAGATGAGAAAGATGataaaaaagacgaaaaaatgGAAATCGAAAGTGAAATCGTTGGACCGAATTCACCTTCTACCATAGCAAAATAA
- Protein Sequence
- MVLAEKNNSNIKNGQRSRGPSPNGNGGPSPVSPIDDEGEKIRVGRDYQAVCPEYIPAEERKPDSETNDRALLVWSPSKDISDDQLDKYIQIAKEKYGYNGEQALGMLFWHKHDLEKAVLDLGNFTPFPDEWTVEDKVLFEQAFTFHGKTFHRIRQMLPDKSMGSLVKYYYSWKKTRTRTSLMDRQARKLGGVKEETSELGSEQGSNTDSENEEKKENGEVKEVKIYCTNCGIPCTMTKSTPKGIMCNTCYLHWRKTGNVRPTTGPLRGRDRHSYNVFKKKAKPPRGMHIDHEDLVSLASQHSQNLFINLDREIASLKRQVQNNKQTLGSMKRKLNDSIQELRPAENFSRINSRWSNEELSLAVQGVRKYGKNFKAIAEIIGTKTEAHVRNFFVTYRKRYNLDVVLKEYEADNGLIIDISDEKDDKKDEKMEIESEIVGPNSPSTIAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01164836;
- 90% Identity
- iTF_01307957;
- 80% Identity
- iTF_01307957;