Rarc006561.1
Basic Information
- Insect
- Ricinus arcuatus
- Gene Symbol
- RCOR3
- Assembly
- GCA_027475445.1
- Location
- JAOXJT010000009.1:194026-206169[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-08 5.5e-05 24.4 0.0 3 46 130 173 128 173 0.96 2 3 1.3 3.8e+03 -0.7 0.1 36 44 247 255 241 256 0.87 3 3 7.1e-14 2e-10 41.8 0.0 3 46 353 396 351 396 0.97
Sequence Information
- Coding Sequence
- ATGGTTTTAGCTGAAAAAAATAATAGTAATATCAAGAATGGGCAGAGATCGCGGGGCCCTAGCCCTAATGGAAATGGGGGTCCTAGTCCTGTGTCGCCTATCGATGATGAAGGGGAAAAGATTCGAGTAGGGAGAGATTATCAAGCAGTATGCCCGGAATATATCCCAGCAGAAGAAAGAAAGCCAGACAGTGAAACGAATGACAGAGCTCTATTAGTATGGTCTCCATCAAAGGATATTTCTGATGATCAATTGGATAAGTACATTCAAATTGCAAAGGAAAAATATGGCTACAATGGAGAGCAGGCTCTAGGAATGTTATTTTGGCACAAACACGATTTAGAGAAGGCTGTTTTAGATTTAGGTAATTTCACGCCGTTTCCCGATGAATGGACAGTTGAAGATAAAGTTCTTTTTGAACAAGCATTCACATTTCATGGGAAGACCTTTCATAGGATTAGGCAAATGCTGCCGGATAAGTCAATGGGCTCCTTAGTGAAGTATTATTATTCGTGGAAAAAAACTAGAACTCGGACTTCATTAATGGATAGACAGGCTAGGAAGTTGGGTGGCGTGAAAGAAGAGACCAGTGAATTAGGAAGCGAGCAAGGCTCAAACACAGATTCTGAAAACGAAGAAAAGAAAGAGAATGGAGAAGTAAAAGAGGTCAAGATATATTGTACCAACTGTGGGATCCCCTGTACCATGACAAAATCTACTCCGAAAGGGATAATGTGTAACACATGCTATTTGCACTGGAGAAAAACGGGAAATGTTCGCCCGACAACCGGTCCGTTAAGAGGTCGTGACAGACACAGTTATAATGTATTCAAAAAAAAAGCGAAACCTCCAAGAGGGATGCATATTGATCATGAAGATTTGGTTTCCCTCGCTTCACAGCATTCTCAGAATTTATTTATTAATTTAGACCGCGAGATTGCCTCCCTGAAACGACAGGTACAAAATAATAAACAAACACTGGGGAGTATGAAAAGAAAACTAAATGATAGTATCCAAGAATTACGTCCAGCTGAGAATTTTTCACGTATTAATTCACGTTGGTCAAACGAAGAACTTTCTTTGGCTGTTCAGGGCGTAAGAAAATATGGTAAGAACTTTAAAGCTATAGCGGAAATCATTGGCACGAAAACCGAAGCTCATGTGCGTAACTTCTTCGTAACTTACAGAAAAAGGTACAATCTGGATGTAGTGCTCAAGGAATATGAGGCCGATAATGGACTTATTATTGACATATCAGATGAGAAAGATGATAAAAAAGACGAAAAAATGGAAATCGAAAGTGAAATCGTTGGACCGAATTCACCTTCTACCATAGCAAAATAA
- Protein Sequence
- MVLAEKNNSNIKNGQRSRGPSPNGNGGPSPVSPIDDEGEKIRVGRDYQAVCPEYIPAEERKPDSETNDRALLVWSPSKDISDDQLDKYIQIAKEKYGYNGEQALGMLFWHKHDLEKAVLDLGNFTPFPDEWTVEDKVLFEQAFTFHGKTFHRIRQMLPDKSMGSLVKYYYSWKKTRTRTSLMDRQARKLGGVKEETSELGSEQGSNTDSENEEKKENGEVKEVKIYCTNCGIPCTMTKSTPKGIMCNTCYLHWRKTGNVRPTTGPLRGRDRHSYNVFKKKAKPPRGMHIDHEDLVSLASQHSQNLFINLDREIASLKRQVQNNKQTLGSMKRKLNDSIQELRPAENFSRINSRWSNEELSLAVQGVRKYGKNFKAIAEIIGTKTEAHVRNFFVTYRKRYNLDVVLKEYEADNGLIIDISDEKDDKKDEKMEIESEIVGPNSPSTIAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01164836;
- 90% Identity
- iTF_01308621;
- 80% Identity
- iTF_01308621;