Rmar011018.1
Basic Information
- Insect
- Ricinus marginatus
- Gene Symbol
- Irf8
- Assembly
- GCA_028565995.1
- Location
- JAOWBB010001618.1:1-636[+]
Transcription Factor Domain
- TF Family
- IRF
- Domain
- IRF domain
- PFAM
- PF00605
- TF Group
- Helix-turn-helix
- Description
- This family of transcription factors are important in the regulation of interferons in response to infection by virus and in the regulation of interferon-inducible genes. Three of the five conserved tryptophan residues bind to DNA.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-12 9e-08 33.3 0.0 49 88 119 157 118 159 0.92
Sequence Information
- Coding Sequence
- GATGGGGCGGGGCTAAATGATGGGGCGGGGCTATTCAGGAGGGGTGAGGACACGGAAAGGGGGCGGGGTCAGGAAAAGGGGCGGAGCGATACGGTCTTGGTAAAGGGGGCGGGGTCATCGGGGAGGGTAAGGGGCGGAGCTAAAGGGGATCAAGGCAGGGCGTTGCACGTGAGGGGGCGTGGTCAAGGGAAAGGGGGCGGGGCTTGGGCCAAGCCACGGAGTGGGAGCGGCGCCAGCGCGGGGCGGGGACCGCGATGGGCGTGGCCACGGGTGGGTGGGCGTGGCCAAGCAGAGACGAGGCCAATCGATGGGTGGGCGTGTCCCCGGCCACGCCCCGACGCGGATTGGCCGCCGCAGGCGTGGGCGGAGTACAAGGGACGGGTGCGGCCCGGGGACCCCCCGGACCCCGCGGGGTGGAAGACGCGGCTCCGCTGCGCCCTCGCCAGATGCCCCGAGTTCGTGGAGGTGCCCCCGCGGGGCC
- Protein Sequence
- DGAGLNDGAGLFRRGEDTERGRGQEKGRSDTVLVKGAGSSGRVRGGAKGDQGRALHVRGRGQGKGGGAWAKPRSGSGASAGRGPRWAWPRVGGRGQAETRPIDGWACPRPRPDADWPPQAWAEYKGRVRPGDPPDPAGWKTRLRCALARCPEFVEVPPRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -