Rmar004349.1
Basic Information
- Insect
- Ricinus marginatus
- Gene Symbol
- KDM5A
- Assembly
- GCA_028565995.1
- Location
- JAOWBB010000007.1:1767387-1777155[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-23 4e-20 73.0 0.0 2 89 103 186 102 186 0.95 2 2 0.99 3.9e+03 -0.7 0.0 6 42 906 941 901 955 0.82
Sequence Information
- Coding Sequence
- atggtatataaaagtgaaaaatcacCAACAAAAAGTCCCAATAAGGGCTTGGGATTGTCTCCATTAATGACGGAagactttcattttattgtccCTCCTGAAGCGCCAATTTATACTCCGGacaataatgattttcaagATCCTCTCGCATATATTGCCAAAATTAGACCTGAAgcggaaaaatttggaatatgtaaaattaaaccaCCTCCTGACTGGCAGCCACCGTTTGCAGTTGATGTTGACAGatttaaattcacACCAAGAATACAAAGATTAAACGAACTGGAAGCAAAAaccagaataaaattaaattttctggatcaaattgcaaaattttgggAATTACAAGGAAGTTCTTTGAAGATACCTATGGTGGAAAGAAGAGCCTTAGATTTATATGCTCTTCATAGATTTGTTGAAGAGGAAGGTGGTTTTTATGGTGCAACTACAAACAGAAAATGGTCGAAAATTGCAAGCAAAATGGGATTTCCCACAGGCAGGGATTtaggTAGCGTTTTAAAACATCACtatgaaagaattttacatccttttgatatttttaaacaaggaAAAACGTTATCGGATATCAAATCCGAGAAGGATGAAGGAACGGATTGCGAAGGAAGTGTTTCAGattctaaaaagaaagaaaaagactaTAAACCTCATGGTATCGTATCACGACAAGCAATTAAACCTCCTGTTGAGAAATATGCCAGACGATCAAAACGTTGTTTTGAGAATAAATCTAAACAAGGGGAGTTTTCCGAACAgaaatcaaaaagtaaaaaaagagaagtgaaaaaaatatcaagttaCGAGTTTGATCCTTTAGCTAAATATATATGTCATAATTGCGAACGAGGGGATGCAGAAGAAAATATGTTGCTTTGTGATGGTTGTGACGATTCTTATCACACATTTTGCCTACTTCCCCCACTGACAGAAATTCCCAAagGAGACTGGCGTTGTCCGAAATGTGTTGCCGCTGAAGTTTCAAAACCAATGGAAGCATTTGGTTTTGAACAAGCTAGAAGAGAATACACTTTGCAGCAGTTTGGTGAAATGGCTGATCAGTTTAAatcagattattttaatatgccCGTTCATATGGTTCCATCTTCtttgattgaaaaagaattttggaGAATTGTCAGTTCTATAGACGAAGACGTGACAGTTGAATATGGAGCCGATCTTCATACAATGGATCATGGATCAGGATTTCCCACGAAAATAAGTGTAGAAGAAATGGGAACTTGTGAACTTGAATACGCAAAATCAAGatggaatttaaataatcttccTTGCctggaaaattcagttttaggTCACATTAATGCCGACATATCAGgtaTGAAAATACCATGGATGTATGTCGGTATGTGCTTTGCAACTTTCTGTTGGCATAATGAAGATCATTGGtcttattcaattaattatcttCATTGGGGTGAAGCCAAGACCTGGTATGGTGTTCCGGGAGATAAAGCGGAAGATTTTGAgctttcaatgaaaaaagcTGCACCAGAATTGTTTCAGAGCCAGCCTGATTTACTACACCAACTCGTTACTATTATGAATCCTAATATTCTAATGGATGCGGGAGTACCCGTCTATAGaactgATCAGGAAGCAGGTGAATTTGTTATTACATTCCCTCGAGCGTATCATGCAGGTTTTAATCAAGGTTACAATTTCGCAGAAGCAGTCAATTTTGCTCCAGCAGATTGGTTATCAAAAGGAAGGGAATGTATCGATCATTATTCAATGTTGAGAAGGTACTGTGTATTTTCACATGATGAATTAGTTTGCAAAATGGCAAGTTGCCCTCCAAGTTTGGATTTAACAGTAGCTACGGCAACGTATCAGGATATGACCCTAATGGttcaaacagaaaagaaattaagaaagagTTTATTAgAATGGGGAGTCACAGAAGCTGAGAGAGAGGCCTTTGAATTACTTCCCGATGATGAAAGACAGTGTGAAGTTTGTAAAACTACATGCTTTTTATCAGCAGTTACCtgCAGTTGCAGTGAAGAGCAGTTAGTTTGTCTTCGACATTGTACGGAGTTATGCAAATGCCCTCCAGAAAAGCATAAATTGAGGTATAGGTATACACTCGATGAACTACCTGTTatgcttgaaaaattaaagttaagaGTAGAATGTTATGATTCATGGTGCGAAGATGTCAGAGATGCTCTTGATAAGACAAAAGAGAAGACTTTAACACTTCAAGAATTGAAAGCCTTATTAAATACAGctattgacaaaaaatttcccgaaactGACTTGTTGGAGAACTTAAAAGTAGCTGTTGAGGAAGCAGAGAAATGCGCTGCTGTAGCTCAACAGCTGgccaataaaaaattgaggaCCAGAACTCGGCAATCATcagaatcaaaatataaattaactgtTGAAGAATTAACTCTTTTTTGTGAGGAAATGGAGAATTTATGTTGTGTTTTAAAGGAAACTGACACTATTAAAGATCTCTTGGAGAAGGTAGAAGATTTTCAAAaggaggcaaaaaaattattggatttGGAATCAGCCGATTCTGCAGCTTTGGAAAAATGCATCGATGctggAGTAATGTTAGATGTTGAGTTACCGGAATTAGTCGTGTTAAAGTACAATCTGCAGAGAATAACATGGTTGGAAGAAGTAGCAGAGACCAAAGAGGATGAAGACGAGGTAACTTTAGAAGTACTTAGAAGTTTACTAGATGCTGGAGTGGAATTGCCACCTCATCCGCtggtagaaaaagaaatggctGATTTACAGcaactatttttaaatgttgaaaaatgggaggaaaaagccaaagaatatttaaactcAAAACAGAGACAACCGATCTCAGCATTAGAAAAGCTTCTGAAGGAAGGAGAAGAATTACCTGCCTTCTTACCCAGTGAAAGCAGCTTAAGAGATGCCCTGAAAAAGGCTAAAGACTGGTTGGCTAAAGTTGAAGGAATTGAAAGTGCACCAGATTTTCCTTACTTGGATACTCTTGAAGCTTTGGTGAATAAAGGTCGCCAAATTGCCGTCAAATTGGATGTTCTGACTGTATTTGAaacaaaactggaaaatgcTAAATCTTGGAAGGAACGAACGGCTCGTacgtttttaagaaaaaattcaagatacACATTGATGGAGGCTCTGAGTCCAAGAACTGAATTCGGAATTAACgtactgaaaatgaaaaagaaaaaaccaaatGAAGAGAACTCGCATTCTGCACCAGTGGTTTATGATGTAAAATTGGAAggCACTGTTAGTCCTGTAGCCGTTGTAGCTGCATTTAAGCATGCAGAAAGGCAAGAAATGAGTGCTATGCGTGATTTACGGTTACAAAACTTAAGAAAACGCGCAAGTGATAAAAACGATATTAAATACTGTATCTGCAGAAGAGGGGCCACTGGgtttatgTTGCAATGTGAATTATGCAAAGATTGGTTTCACGCTGCATGCGTTCCTCTTCCAAAACATGTTGGAGCCAAAACAAAACAGAGTCCTGCACAACAATTAGCCGCTGCAGCTACAAGAGAAGTTAAGTTTTTATGTCCTTGTTGTCTAAGATCCAGGAGACCCAGATTGGAGAcaattttatctcttttagTATCTCTTCAGAAGCTAGAgGTTCGGCTACCTGAAGGAGAAGCTCTTCAATGCCTTACAGAACGCGCTATGAACTGGCAGGATCGTGCAAGAACATCTTTAGCAACGGATGAAATTGCAAATGCATTAGCAAAATTATCTGTTCTTAGTCAAAAATTAGTTGAAGCTGCAGCGcgtgaaaaaactgaaaagatcATTAgcagtgaattaaaaaaagctgcAGgtaaTCAGGAGCTACATCGCCGAGTGCGAGCCATATCCGGCGTATCATCTAATGAAGATTCTCAGAGCCCACAGACAAATCCGATTAGTTCAGGCTGGCTAAATCAAAACCATGATGATCATTCGCAGAATGGGTTTAGCCAGGAGCAATCGCAAGATAGTTTCACAGATAAAAATGCCGATGATACTATATCgtcattaacatatttttctggTAATTCAGAACATGCCTATAGTACAGCGAGTAAGACGCCTCTTGTTAAACAAACAAaACAACCTCCCCTTGTATTAAGCGAAATTGCAAGGGCTGAATTAGAAGAATTAATGCTGGAAGGAGATCTGTTGGAAGTATCACTTGATGAAACAGTTCACATTTGGCGAATTTTGCAAGCAACGAAGCCTAAGccggaaaaagataaatatccGCCTATTGAACAACTTGAATCAGAATTATTAGCAAGCAAGGCCGAAAAAGATCGCGTCAAAGCTAAACAACGTGCAAGaaaGCGAAGAATAGAGGATCATGAATCTGGACAACAAAATACAAAGGGCAAAAAGTACAAAATCAAACCATACAATTCATCTACGTTATATAACGACCTCTCAAAAGTTAATGTTGCAAGCGCTGCTCAGTCAgggaaaagattaaataaaaagcagttGAAAGAGATGATTAAAAAGGGTAAACctggaaaacaaataaaaaggaaatctaatgagacggagaaaaaaattattacaaaaagaaaaaagaaggcaGAACGTGAATCCAGTACTGATTCCGATTCTGATGAAAATTGTGCTGCTAAGAAATGCTTAAAACCTATTGGAAAAGAAGTTGACTGGGTTCAGTGCGATGGTGGATGCGAGAAGTGGtatcattttaaatgcttaGGAATTGATAAGAAAGACATTCATGAGGATGAGGATTTTATTTGTGAAGGATGtcagaaaatgaatataaaaagaagttcTAGACATAATCCTCAACATCAAGTCACTCCAGTTACTTCTTCACATCACGAATCTGGTGTTAATAATAGAGTGAAGgtTGAGCCTACGAATCTTGACGAAAGTCTTGGTCTTGACGCTTTGCTTTCTTTAGCAAGTGGTCTACCAGAACCAGACTCTGCTGGTTTAACAGGACTAGAAAATGGTAATTCTGGTTGGATGCATCAGCAAGGATTTTCGTATGATATGGATGTTCACCGGTCATTCCAAAATATGCCGTCTAGGTCGGGCCTTACCATTTCTGCACCGATGTCAAATCCACCAGAAATTCTTCTTACTCCTAATTCTACGCCTGCTCAAGGTCTTTCATCCATTCCGAATCAGTCTCATAATTATTCAGTTCAAGAAGGACCTTCTTTTCAGAATTACACCCCCATCATTCAGCAAGGAtaccaggaaaaaaaaattccatctgATCCTCAATATTCGCAATTTGGTTTGACAGATAATATGCAGTATTCTCATGATCcaaatagttttaattctcagaattcagtttttcctcaaaattaTAGTAATTCACAACTTCCTCCTCAGGCCCCAGCATCAAACTTTCCTCCTAATTATCAAACAACGGTACAAAACGATCAGCAAAATCAGAATTATTCTAATCATTCTGACCGCGAATACGGCCAAGCAACTGGCTTTGTCTCTCatcaaaattatcaatataCGTCTTCGGATTACTTGAAATCAGACAATTCTCCTTATGCAGAATTCCAAAATATGCCTCCTCAGCATTCGGATAATTTTCAGCGGGGTACGGTAACACAACTAGCACAAGATTCTTATGTTTTAACGCAACTTACTGAATTATCTAAGTCCAATTATCCAGTACAGACCTTTCCTATTAGTGAAACAACCTTTAAGCAGCCCGATTATCACAGGATCTTTTCCGAAGCGTCGAAAGTTAGTGAAGCCTCTCCCTCAGATATTCAACAGACCAAACAGACGCCTAGAACTGATGAAAAAGTAGAAGAAGATAATCAAATGAAATCAGTTACTGATAAAATCAAGTCAGATTCAGTGCAATCCTCGCTCAGGAGCGAAGAAAATTCAGACATCGAGAAACcagtttctgaatttttaaaacaaagtcaataa
- Protein Sequence
- MVYKSEKSPTKSPNKGLGLSPLMTEDFHFIVPPEAPIYTPDNNDFQDPLAYIAKIRPEAEKFGICKIKPPPDWQPPFAVDVDRFKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVERRALDLYALHRFVEEEGGFYGATTNRKWSKIASKMGFPTGRDLGSVLKHHYERILHPFDIFKQGKTLSDIKSEKDEGTDCEGSVSDSKKKEKDYKPHGIVSRQAIKPPVEKYARRSKRCFENKSKQGEFSEQKSKSKKREVKKISSYEFDPLAKYICHNCERGDAEENMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAAEVSKPMEAFGFEQARREYTLQQFGEMADQFKSDYFNMPVHMVPSSLIEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKISVEEMGTCELEYAKSRWNLNNLPCLENSVLGHINADISGMKIPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGDKAEDFELSMKKAAPELFQSQPDLLHQLVTIMNPNILMDAGVPVYRTDQEAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLSKGRECIDHYSMLRRYCVFSHDELVCKMASCPPSLDLTVATATYQDMTLMVQTEKKLRKSLLEWGVTEAEREAFELLPDDERQCEVCKTTCFLSAVTCSCSEEQLVCLRHCTELCKCPPEKHKLRYRYTLDELPVMLEKLKLRVECYDSWCEDVRDALDKTKEKTLTLQELKALLNTAIDKKFPETDLLENLKVAVEEAEKCAAVAQQLANKKLRTRTRQSSESKYKLTVEELTLFCEEMENLCCVLKETDTIKDLLEKVEDFQKEAKKLLDLESADSAALEKCIDAGVMLDVELPELVVLKYNLQRITWLEEVAETKEDEDEVTLEVLRSLLDAGVELPPHPLVEKEMADLQQLFLNVEKWEEKAKEYLNSKQRQPISALEKLLKEGEELPAFLPSESSLRDALKKAKDWLAKVEGIESAPDFPYLDTLEALVNKGRQIAVKLDVLTVFETKLENAKSWKERTARTFLRKNSRYTLMEALSPRTEFGINVLKMKKKKPNEENSHSAPVVYDVKLEGTVSPVAVVAAFKHAERQEMSAMRDLRLQNLRKRASDKNDIKYCICRRGATGFMLQCELCKDWFHAACVPLPKHVGAKTKQSPAQQLAAAATREVKFLCPCCLRSRRPRLETILSLLVSLQKLEVRLPEGEALQCLTERAMNWQDRARTSLATDEIANALAKLSVLSQKLVEAAAREKTEKIISSELKKAAGNQELHRRVRAISGVSSNEDSQSPQTNPISSGWLNQNHDDHSQNGFSQEQSQDSFTDKNADDTISSLTYFSGNSEHAYSTASKTPLVKQTKQPPLVLSEIARAELEELMLEGDLLEVSLDETVHIWRILQATKPKPEKDKYPPIEQLESELLASKAEKDRVKAKQRARKRRIEDHESGQQNTKGKKYKIKPYNSSTLYNDLSKVNVASAAQSGKRLNKKQLKEMIKKGKPGKQIKRKSNETEKKIITKRKKKAERESSTDSDSDENCAAKKCLKPIGKEVDWVQCDGGCEKWYHFKCLGIDKKDIHEDEDFICEGCQKMNIKRSSRHNPQHQVTPVTSSHHESGVNNRVKVEPTNLDESLGLDALLSLASGLPEPDSAGLTGLENGNSGWMHQQGFSYDMDVHRSFQNMPSRSGLTISAPMSNPPEILLTPNSTPAQGLSSIPNQSHNYSVQEGPSFQNYTPIIQQGYQEKKIPSDPQYSQFGLTDNMQYSHDPNSFNSQNSVFPQNYSNSQLPPQAPASNFPPNYQTTVQNDQQNQNYSNHSDREYGQATGFVSHQNYQYTSSDYLKSDNSPYAEFQNMPPQHSDNFQRGTVTQLAQDSYVLTQLTELSKSNYPVQTFPISETTFKQPDYHRIFSEASKVSEASPSDIQQTKQTPRTDEKVEEDNQMKSVTDKIKSDSVQSSLRSEENSDIEKPVSEFLKQSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01250863;
- 90% Identity
- iTF_01307817;
- 80% Identity
- iTF_01307817;