Basic Information

Gene Symbol
KDM5A
Assembly
GCA_037055365.1
Location
JAWJWE010000041.1:2358904-2368144[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-23 4.1e-20 71.4 0.0 2 89 103 186 102 186 0.95

Sequence Information

Coding Sequence
ATGGTgtacaaaagagaaaaatcaccCAATAAAAGTCCAAATAAAGGATTGCAAATGTCTCCCATGGTGGctgaagaatttcattttgtggTGCCTCCAGAAGCACCTGTCTACACTCCACAAAATAATGAGTTTGATGATCCATTAGCTTACATTGCTAAAATAAGACCAGAAGCAGAGAAATATGGAATTTGTAAGATTAAACCTCCACCTGATTGGCAACCACCTTTTGCAGTAGATGTTGatagGTTTAAGTTCACTCCCAGAATACAAAGATTAAATGAATTAGAAGCCAAGACAAgaattaagttgaattttttggaCCAAATAGCAAAATTTTGGGAACTTCAAGGAAGTTCACTAAAAATTCCAATGGTCGAAAGGAGAGCTTTGGATTTGTATGCTCTTCACAGATTTGTGGAAGAGGAAGGTGGATTTTACGGTTCAACAACAAATAGGAAGTGGTCTAAAATTGCTGGTAAAATGGGATTTCCCACAGGAAGAGATTTGGGGAGTGTTTTGAAACATCACtatgaaagaattttacatccttttgatattttcaagCAAGGGAAAACAGTAGCCCAAATTAAAtctgaaaaagatgaaaattctGATTGTGAAACAAATGGTTCAGatgcaaaaaagaaagagaaagattaCAAACCACATGGCATTGTCTCCAGACAAGCCATTAGACCACCCGCTGAAAAATATGCCAGGAGGTCAAAAAgatgttttcaaaataaatcaaagcaAGgTGAATGTATTGAAAACAGAGCAAAgtgtaaaaagaaagaagttaagaagAATTCACATTATGAATATGATCCTCTAGCTAAGTACATTTGTCATAATTGTGAAAGAGGAGATGCTGAGGAGAATATGCTCCTATGTGATGGTTGTGATGATTCTTACCACACCTTTTGCTTACTCCCACCCCTAACAGAGGTTCCAAAGGgGGATTGGAGATGCCCTAAATGTGTTGCAGCTGAAGTATCAAAACCTATGGAAGCATTTGGGTTTGAACAGGCACGACGAGAATACACATTGCAACAGTTTGGAGAAATGGCAGATCAGTTCAAATCCGACTATTTTAATATGCCAGTACACATGGTTCCTTCGACTCTGATTGAAAAAGAGTTTTGGAGGATAGTCAGTTCTATAGACGAAGACGTAACGGTGGAATATGGTGCTGATTTGCACACCATGGATCACGGCTCAGGatttccaacaaaaattaGTGTTGAGGAAATGGCCACATGTGAAATTGAATATGCCAAATCAAGGTGGAATTTGAATAATCTTCCTTGTCTCGAAAATTCGGTTTTGGGTCATATTAACGCCGACATATCtgGAATGAAGGTGCCCTGGATGTATGTTGGAATGTGTTTCGCTACATTTTGCTGGCACAATGAAGACCATTGGTcgtattcaattaattatttacactgGGGCGAAGCAAAAACTTGGTACGGGGTGCCGGGTGGAAAGGCTGAAGAATTCGAACTCTCGATGAAAAAGGCTGCCCCAGAATTATTCCAAAGTCAACCTGACCTTCTCCATCAACTTGTTACCATTATGAACCCAAATATTTTGATGGATGCAGGTGTTCCTGTGTACAGGACGGATCAAGAAGCTGGAGAGTTTGTCATTACATTTCCACGAGCGTATCATGCCGGCTTTAACCAAGGATATAACTTTGCCGAAGCAGTTAATTTCGCCCCAGCCGATTGGTTGGCCAAGGGACGTGAATGCATCGACCATTATTCAATGTTACGCCGgTATTGCGTGTTTTCCCACGACGAACTCATCTGTAAAATGGCGAGTTGTCCAAATAGTTTAGATTTAACCGTTGCTACTGCAACTTTTCAAGACATGAAAATTATGGtacaaacagagaaaaaacttAGAAAAAGCCTGTTGGagtGGGGTGTTACTGAGGCGGAACGGGAAGCATTTGAATTGCTTCCGGATGACGAACGGCAATGTGATGTATGCAAAACTACATGTTTCTTGTCGGCAGTTACCTGTAGTTGCAATAATGAGCTTTTGGTTTGTTTACGTCACTGCACAGAACTGTGCAAATGTCCTCCCGAGAAACATACACTTCGGTACAGGTATACATTAGATGAATTGCCAGTGATGCTAGAGAAATTGAAGCTTAGAGTCGAATGCTACGATACCTGGTGTGAGAACGTGACCAACGCTCTGGACAGGACAAAGGAAAAGACTGTCACTTTTCCTGAGTTGAAGGCGTTTTTAAATACTGCCTACGACAAGAAGTTTCCCAATactgatttattaaataatttgaaaaatgctGTGGAAGAGGCTGAGAAATGCGCTGCAGTAGCCCAGCAGTTggcgaataaaaaattaaggacACGAACTCGGCAAACTGCtgaatcaaaatataaattaaccaTGGAAGAGCTGACATTGTTTCATGAGGAAATTGAGAATCTTTGTTGCATTCTGACAGAAACAGAAACGATTAAAGAGCTTTTGGAAAAGGTTAAAGATTTTCAAAACGAagccaaaaaattattggacCTTGAAACGGCTGATTCCGCTGCTCTAGAAAAATGCATTGATGCTGGAATAATGCTTGATGTGGAACTACCAGAATTAGTAGTATTGAAGCACAATCTTCAAAGAATCACATGGTTGGAAGAAGTTGCCGATACTaaagaagacgaagatgaAGTGACTTTGGATGTCTTGAGAAGCTTGCTAGATGCTGGTGTTGAATTACCACCACATTCTTtggtggaaaaagaaatggctTCTTTGCaacaaTTGCTTATGAATGTCGAAAAATGggaagaaaaggcaaaggaaTGTTTAAATTCCAAACAAAGGCAACCTATTTCAGCTCTCGAAAAACTCATAGCTGAGGGAGAAGAATTACCAGCTTTTCTTCCCAGTGAAGGAAGCCTAAGGGATGCTTTGAAAAAAGCTAAGGACTGGATCGCAAAGGTGGAGGCGATTGAGAATGCGCCAGATTTTCCCTATTTGGATACATTGGAGACCttggtgaatAAAGGCAGACATATACCCGTGAAATTGGAGGTGATGTCTGTTTTCGAATCTAAATTAGAAAATGCGAAATCTTGGAAAGAAAGAACCGCTCGTACTTTTCTGCGTAAAAATTCAAGATACACTCTCATGGAAGCTCTTAGTCCTAGAACCGAATTCGgtataaatgtattaaaaatgaaaaagaaaaagcccAGTGATGACAATTCTTACAGTGCACCTACAGTTTTTGATGTTAAGCTAGAAGgAACTGTCAGTCCAGTTGCTGTGGTGGCAGCTTTCAAGCATGCTGAAAGACAAGAAATGACTGCGATGCGTGATCTCCGTTTACAAAACCTGAGAAAGAGAGCCAATGACAAGGGtgatattaaatattgtatatgCAGACGAGGCGCGACAGGTTTTATGCTTCAATGTGAGCTCTGTAAGGACTGGTTTCATGCGGCGTGCGTTCCACTTCCAAAACATACAGGAGCCAAAACAAAGCAAAGTCCTGCACAGCAATTGGCGGCAGCTGCCACAcgagaagtaaaatttctctGTCCTTGTTGCTTAAGATCTAGACGACCAAGGCTGGAGACTATTCTGTCATTATTGGTGTCACTTCAGAAGCTTGAGGTTCGACTGCCTGAAGGAGAAGCTCTTCAATGCCTAACAGAAAGAGCAATGAATTGGCAGGATCGAGCGAGAACTTCACTTGCCACTGACGAAATAGCAAATGCATTAGCAAAATTGTCTGTTCTTAGTCAGAAACTTGTTGAAGCTGCAGCTCGGGAAAAGactgagaaaattattactagTGAACTTAAAAAGGCGGCCGGCAAAATTGGAAACCCCGAATTGCACCGACGAGTGCGTGCCATATCTGGGGTGTCTTCGAATGAAGACCTTTCACAATCCCAAAGCAACATGCATGGATCTGGATGGCTAAGTCAAAATAATGACGATCACTCTCAGAATGGTTTCAATCAAGATCATTCACAAGACGGTTtttcggaaaaaaataatgatgacGCAGTCTCATCTCTCACATATTTTTCTGGCAATTCTGAACACGCGTACAGCACAGCAAGCAAAACACCTCTGGTTAAGCAGGCCAAACAACCTCCTCTAGTTTTAAGCGAAATTGCCAGAGCAGAATTAGAAGAATTAATGTTGGAGGGAGATTTGCTGGAGGTGTCACTAGATGAAACCGTACACATTTGGCGCATTCTTCAGGCCACAAAAccgaaacctgaaaaagaaaagtatccTCCAATAGAGCAATTGGAATCCGAATTGATAGCtggtaaaattgaaaaggatCGCTTTAAAGCAAAGCAGCGTGCAAGGAAAAGGAGAACAGAGGAGCACGACAATTCACAACAGAGTATAAAGGGTAAAAAGTACAAAGCTAAGCAGCCGCAGTTAAATTCGCCGACAATATACAACGATTTGTCGAAAATAAACGTTGCAGCAGTTGCAGCGCAAACaggaaagaaattcaataagaaacaTCTTAAGGATTCTGGAAAGAAGTTCAAACCAGGGAAGCAGATGAAGAGAAAGTTAAATGAACCTGAGAAAAAAACTCTAaccaagagaaagaaaaaagtcgaTAGAGAATCCAGTACAGATTCAGATTCGGACGAAAACTGTGCTGccaaaaaatgtttgaaaccAATTGGCAAAGAAgtcGATTGGGTTCAATGCGATGGAGGTTGCGAGAAGTGGTATCACTTTAAGTGTTTGGGTATTGACAAGAAGGACATTCGCGAAGACGAAGACTTTATCTGTGATGGCTGTCAAAAAATGAGTCTTAAAAGAGGTCCGAGACATCATTCGCAACAGCAGAACAATACAAGCGTATCATCTCATCGTTCGGACTCTGTAACCAGTAACAGAGTTAAGGTTGAGCCCACCAATTTGGATGAAAGTCTTGGACTCGATGCTCTACTCTCCCTGGCCAGCGGTCTACCAGAAGCGGACACAAGCGCCGTGGGTGGAATGGAGGGCAACAATGGGGGTTGGATGCATCAACAGGGATTTTCATACGACATGGACGTCCACAGGACATTCCACAgtATGCCATCAAGGTTGGGTTTACCAGTTTCCGATCCCATACCTAATCCCCCCGAAATGTTACTACCTCCTAATCCAATGCCCCTGCCTGGTCCAGTACCTATTTCAAACGCTCCACATTCGTACCCTATTCAGGAGAGACCTCCTATTCAGAAGTATCCTCCCACTATGGAGCAACATGGATACCCTGATATGAAATATCAGGATAAGAAGATGCCGGCACCAACGCCGCCGGCACccccaccaccaccacaaTCTGCTGAAACCCAGTACCATCATTATGGGTTACCAGAAAATGTCATGCAGTATTCTCCTCATCCACAAAACTATAATCCACATCATCCACCTATGTATCCCCATAATTATCAAAATTCCCAACCGGCTCCTGCACCAGGTCCACCGAGTTCCCTACCCCCCAATTATACTTATCCGACACAGAGTTTTCCACAACCTAACCAAAATTATCCCAATCAGGTCAACAGGGATTTCATTCAACACGGACCTCCTTTTGGTCCCCATCACAACTATCGTTACCCCAGTGCTCCACCTTATCCTAGCGACCCCTACGGCAATATTACTCAGCAAGGTGATGCGTATGCCCGCGGTACTTTACCTGTTGCTCCTCCCGTGCAGGAGTCATATGTTCTCACACAACTCACCGACTCTAATAAATCTAATTATCCAGTACAAAGTTTTCCTATCAGTGAGTCTTCCTTCAACCAACCAGAGTACCATCCGGTATTCAGCAACGACAGAAAAGGCTTTTTGGAGAAGGTTTCAACCAATGAGGACGTTCAACCAATGGAAAATCCAAACCTTCGAGAAAGTGAAGGCATTGCGGGATGTCCAACAAGCGAATGTGAACAAGGAATAGAAAACACGATGAGGGAGCACCAAATGGAggagcagcaacagcagcagcgaTCAGAACAGGAAGACCAACAGGGCCAACAGGAGTCGAGTAAAGAGTGTTTAGATAATAAAGTCAATACTTTGTTGAGTGCaagttaa
Protein Sequence
MVYKREKSPNKSPNKGLQMSPMVAEEFHFVVPPEAPVYTPQNNEFDDPLAYIAKIRPEAEKYGICKIKPPPDWQPPFAVDVDRFKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVERRALDLYALHRFVEEEGGFYGSTTNRKWSKIAGKMGFPTGRDLGSVLKHHYERILHPFDIFKQGKTVAQIKSEKDENSDCETNGSDAKKKEKDYKPHGIVSRQAIRPPAEKYARRSKRCFQNKSKQGECIENRAKCKKKEVKKNSHYEYDPLAKYICHNCERGDAEENMLLCDGCDDSYHTFCLLPPLTEVPKGDWRCPKCVAAEVSKPMEAFGFEQARREYTLQQFGEMADQFKSDYFNMPVHMVPSTLIEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKISVEEMATCEIEYAKSRWNLNNLPCLENSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGGKAEEFELSMKKAAPELFQSQPDLLHQLVTIMNPNILMDAGVPVYRTDQEAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLAKGRECIDHYSMLRRYCVFSHDELICKMASCPNSLDLTVATATFQDMKIMVQTEKKLRKSLLEWGVTEAEREAFELLPDDERQCDVCKTTCFLSAVTCSCNNELLVCLRHCTELCKCPPEKHTLRYRYTLDELPVMLEKLKLRVECYDTWCENVTNALDRTKEKTVTFPELKAFLNTAYDKKFPNTDLLNNLKNAVEEAEKCAAVAQQLANKKLRTRTRQTAESKYKLTMEELTLFHEEIENLCCILTETETIKELLEKVKDFQNEAKKLLDLETADSAALEKCIDAGIMLDVELPELVVLKHNLQRITWLEEVADTKEDEDEVTLDVLRSLLDAGVELPPHSLVEKEMASLQQLLMNVEKWEEKAKECLNSKQRQPISALEKLIAEGEELPAFLPSEGSLRDALKKAKDWIAKVEAIENAPDFPYLDTLETLVNKGRHIPVKLEVMSVFESKLENAKSWKERTARTFLRKNSRYTLMEALSPRTEFGINVLKMKKKKPSDDNSYSAPTVFDVKLEGTVSPVAVVAAFKHAERQEMTAMRDLRLQNLRKRANDKGDIKYCICRRGATGFMLQCELCKDWFHAACVPLPKHTGAKTKQSPAQQLAAAATREVKFLCPCCLRSRRPRLETILSLLVSLQKLEVRLPEGEALQCLTERAMNWQDRARTSLATDEIANALAKLSVLSQKLVEAAAREKTEKIITSELKKAAGKIGNPELHRRVRAISGVSSNEDLSQSQSNMHGSGWLSQNNDDHSQNGFNQDHSQDGFSEKNNDDAVSSLTYFSGNSEHAYSTASKTPLVKQAKQPPLVLSEIARAELEELMLEGDLLEVSLDETVHIWRILQATKPKPEKEKYPPIEQLESELIAGKIEKDRFKAKQRARKRRTEEHDNSQQSIKGKKYKAKQPQLNSPTIYNDLSKINVAAVAAQTGKKFNKKHLKDSGKKFKPGKQMKRKLNEPEKKTLTKRKKKVDRESSTDSDSDENCAAKKCLKPIGKEVDWVQCDGGCEKWYHFKCLGIDKKDIREDEDFICDGCQKMSLKRGPRHHSQQQNNTSVSSHRSDSVTSNRVKVEPTNLDESLGLDALLSLASGLPEADTSAVGGMEGNNGGWMHQQGFSYDMDVHRTFHSMPSRLGLPVSDPIPNPPEMLLPPNPMPLPGPVPISNAPHSYPIQERPPIQKYPPTMEQHGYPDMKYQDKKMPAPTPPAPPPPPQSAETQYHHYGLPENVMQYSPHPQNYNPHHPPMYPHNYQNSQPAPAPGPPSSLPPNYTYPTQSFPQPNQNYPNQVNRDFIQHGPPFGPHHNYRYPSAPPYPSDPYGNITQQGDAYARGTLPVAPPVQESYVLTQLTDSNKSNYPVQSFPISESSFNQPEYHPVFSNDRKGFLEKVSTNEDVQPMENPNLRESEGIAGCPTSECEQGIENTMREHQMEEQQQQQRSEQEDQQGQQESSKECLDNKVNTLLSAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-