Rmar012263.1
Basic Information
- Insect
- Ricinus marginatus
- Gene Symbol
- dl
- Assembly
- GCA_028565995.1
- Location
- JAOWBB010002707.1:112693-116954[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-69 4.4e-65 219.7 0.2 1 169 43 211 43 211 0.97 2 2 0.0051 60 4.5 0.4 39 134 411 509 408 517 0.79
Sequence Information
- Coding Sequence
- ATGGAAGGTGACCAGGCCTCAGATGTAAATATTAGTGATGTCATTGAGGTGATAGAGACTGACGAAATGTACACTGGAGGGACAGGCAGCAATGCAGACGCCGATAATAGGAGGCCGAGAGCTTATGTGAAAATCATTGAACAGCCTGCTTCGAAAGCTTTGAGATTTCGTTACGAATGTGAAGGGAGGTCTGCGGGCAGCATCCCTGGCGTTAATTCtacacatgaaaataaaacctaTCCGGGAAttcaaattgttGGCCATCACGGTAGAGCTGTCGTCGTAGTGTCTTGTGTTACCAAAGATGCCCCTTACAGGCCTCATCCTCATAATCTAGTAGGCAAAGAAGGATGTAATCGTGGAGtatgtacattaaaaatgcataCTGACACAATAACATTCTCAAATTTAGGCATTCAATGTGTGAAGAAGAAGGATATTGAAGAAGCATTAAAAGTTAGGGAAGAAATAAGGGTTGATCCTTTTAGAAcTGGTTTCTCTCATAAAAATCAACCAAGCAGCATTGATCTTAACAGTGTACGGCTGTGTTTTCAAGTGTTCCTGGAAGGCCCAAAGAAGGAAGAATATACAATACCGTTGAGGCCTATAGTGTCAGATCCTATATATGACAAAAaAGCAATGTCTGACTTGACGATTTGTAAATTAAGTGACTGTTCAGCAACAGTGGCaggaggaaaggaaattattcTTCTCTGTGAAAAAGTTGCTAAAGAAGATATTCAAGTACGATTTTACGAAGAGAAGGATGGAGAACTCTATTGGGAGGGGCAGGGAGATTTTCAACCTACCCAAGTGCATAAACAAGTAGCAATTTCTTTCCGAAcacctaaatataaaaatatagagaTAGATAAACCAGTCAGTGTTTGGGTTCAACTTCGAAGACCGTCCGATGGTGCTGTTAGTGAAAGCGTACCTTTTCAGTTCATACCTTTAGATTCAGGTAGGGCAACATTCTGGTCATTACATCGCGCCTTAACTAAAAAGGGCGATTACAATACTTTTTCGAACATCTTAAATCTCAATTCCTCTTCGCTAAATAGAAGCATTCAAAGTTCCTCTATCGAAAATCAAAAGCGAAAAGTGGAAGCAATCACTCCTTCGGTTGTTGATGAATTTTCGGAGATCAAAAAGGCGTTAATTGAACGAAATTCAGATGTAACCAGTAAAAAGGATTCTCTGATATCCGGTGGTCCTTTGGTGATGCTGCCAAAGCCGCAGCTCACAATCTACGAGAAAGAGCcgaaaataatagatttaaattCTGTTAAGAAGGATGAAATCTCGCTTTCCGAACACAGTATGTTTGGCGACTCtcaaaaagataataaaacttCTGATCAAGTCATTTTAAGCAAAACTGATTTTGAGGTTAACGAAGGtaacaataatattcaatCTGATACGGATAAGATGTTAGAAGAAACCAATAACaaaaagaatgatttaaacagcaaaacattcaaaaacatTCAGGGCTCTGAAATGGATAATTCTCAGTCTTTCAACGATTTAATAACGCAAGTTGCTGAATTAGATGAAATCTATTCCGAAACGAAAGATCGATTGATGCTGACGCGGGAGGATTTGGAAGGGCATCTAGATGATACCGCGATGGACTGCCACGAAATATTCGATGATAATCAAACTTACACGAGTTTACAACTTGCCATGAAAAATCCTGTAACTCCCATGGAAATTAAATCCTACGAGGATGTAATGCCAGTCAAAGGACCCATTATTAACATCAGCAAGCAAAACACGGAATCCGATGTTGAAAAATTACCGCCTTTACCGCCGAAAAGGGTCAAGAGAACGCCGCCGAGGCGACCTGACACCTTTCCCCATTCAAAAACTTTACCTAAAACTCCGGACAATAAGATCCGCGTGAAAcagaatatatttatcaagTTGTTCTCTAAGAAAAAGAACGATCCCAGGTCCAGATCACAGGAGAGTGTTAAGGAAGAGCcggcaaaattttcctcgtcAGCGAATTCAACGAATTCACTGCTGAAGGAGTGCAAGCGAAAGACGAGCCTCGATGATTTAACGAATCCAAAGAACACCGGCAAGACCTTTACGAAGTGGTTCCATCACAGAGGCAGCACGGGAAACATTCCCAATGTTTCGGATGTTTCCTTCGCCAAAGAGAACGAAAAAGCTGTCGAGATACCCGAAGTCGAAAAGGGAGGAGCCTAcctggaaaattataattcatgtAAGAATGATTTTGACTTGGCGTTGGATTTGACCGAAGCCGAGAATTACGCCCTTTACACGGCTATGGCTCCGCATGCGACTGCATCAGAGTTCGACGAAATGTCTTTTTATTACAGCCCCGTGGAAGGtggcaaaattttgaatgaagatAATCTTAAATCCAGGATAAAAGATATTGATTTGATTGCAATGAGTAAATCACAAAACATCTCGACCTGA
- Protein Sequence
- MEGDQASDVNISDVIEVIETDEMYTGGTGSNADADNRRPRAYVKIIEQPASKALRFRYECEGRSAGSIPGVNSTHENKTYPGIQIVGHHGRAVVVVSCVTKDAPYRPHPHNLVGKEGCNRGVCTLKMHTDTITFSNLGIQCVKKKDIEEALKVREEIRVDPFRTGFSHKNQPSSIDLNSVRLCFQVFLEGPKKEEYTIPLRPIVSDPIYDKKAMSDLTICKLSDCSATVAGGKEIILLCEKVAKEDIQVRFYEEKDGELYWEGQGDFQPTQVHKQVAISFRTPKYKNIEIDKPVSVWVQLRRPSDGAVSESVPFQFIPLDSGRATFWSLHRALTKKGDYNTFSNILNLNSSSLNRSIQSSSIENQKRKVEAITPSVVDEFSEIKKALIERNSDVTSKKDSLISGGPLVMLPKPQLTIYEKEPKIIDLNSVKKDEISLSEHSMFGDSQKDNKTSDQVILSKTDFEVNEGNNNIQSDTDKMLEETNNKKNDLNSKTFKNIQGSEMDNSQSFNDLITQVAELDEIYSETKDRLMLTREDLEGHLDDTAMDCHEIFDDNQTYTSLQLAMKNPVTPMEIKSYEDVMPVKGPIINISKQNTESDVEKLPPLPPKRVKRTPPRRPDTFPHSKTLPKTPDNKIRVKQNIFIKLFSKKKNDPRSRSQESVKEEPAKFSSSANSTNSLLKECKRKTSLDDLTNPKNTGKTFTKWFHHRGSTGNIPNVSDVSFAKENEKAVEIPEVEKGGAYLENYNSCKNDFDLALDLTEAENYALYTAMAPHATASEFDEMSFYYSPVEGGKILNEDNLKSRIKDIDLIAMSKSQNIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01307805;
- 90% Identity
- iTF_01307805;
- 80% Identity
- iTF_01307805;