Basic Information

Insect: Ricinus arcuatus
Gene Symbol: stc
Assembly: GCA_027475445.1
Location: JAOXJT010000008.1:5095701-5101227[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 4.2e+04 -4.2 1.6 15 19 395 399 394 399 0.81

2 13 0.26 5.5e+03 -1.3 2.1 4 10 428 434 426 443 0.83

3 13 8.6e-06 0.18 13.0 15.7 4 19 444 459 434 459 0.91

4 13 0.034 7.2e+02 1.5 10.4 3 19 497 513 489 513 0.84

5 13 8.3e-09 0.00018 22.7 10.2 1 18 553 570 553 571 0.97

6 13 1.5 3.1e+04 -3.7 0.7 5 10 604 609 604 609 0.92

7 13 4.7e-07 0.0099 17.1 12.1 1 19 615 637 615 637 0.89

8 13 0.0096 2e+02 3.3 12.4 1 11 677 687 677 699 0.91

9 13 4.4e-08 0.00093 20.4 12.7 1 19 704 722 704 722 0.97

10 13 2 4.2e+04 -12.6 19.0 3 19 758 779 751 779 0.81

11 13 1.7e-06 0.036 15.3 9.2 1 16 815 830 815 841 0.86

12 13 1.5e-05 0.32 12.3 16.6 1 19 847 867 847 867 0.94

13 13 0.49 1e+04 -2.2 0.1 8 12 883 887 882 887 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	4.2e+04	-4.2	1.6	15	19	395	399	394	399	0.81
2	13	0.26	5.5e+03	-1.3	2.1	4	10	428	434	426	443	0.83
3	13	8.6e-06	0.18	13.0	15.7	4	19	444	459	434	459	0.91
4	13	0.034	7.2e+02	1.5	10.4	3	19	497	513	489	513	0.84
5	13	8.3e-09	0.00018	22.7	10.2	1	18	553	570	553	571	0.97
6	13	1.5	3.1e+04	-3.7	0.7	5	10	604	609	604	609	0.92
7	13	4.7e-07	0.0099	17.1	12.1	1	19	615	637	615	637	0.89
8	13	0.0096	2e+02	3.3	12.4	1	11	677	687	677	699	0.91
9	13	4.4e-08	0.00093	20.4	12.7	1	19	704	722	704	722	0.97
10	13	2	4.2e+04	-12.6	19.0	3	19	758	779	751	779	0.81
11	13	1.7e-06	0.036	15.3	9.2	1	16	815	830	815	841	0.86
12	13	1.5e-05	0.32	12.3	16.6	1	19	847	867	847	867	0.94
13	13	0.49	1e+04	-2.2	0.1	8	12	883	887	882	887	0.81

Sequence Information

Coding Sequence: ATGGAAGAAAAGAAAGAAAATCTCGACGACATCGTAGCAAGGTCGAAGTTGGTAGCTACAGCTGGGGAATTCATTCCTAAATTTCTTCTTAAATCTGAAAATAATGAATTTCCTGATTCTAATGCATGTGGTATGCCTACATTTGATAATCAAATGTTTATTAATAAACAAGATGAAGCTTCCAGCCAAAATTATGACAGTGGGTTTGTTGGAATAAGTAGTGAATTGAGTACTGATAATGGTTACGAGCGACATATTGACATGCGTAAAGGTGTTGTTGAAGAAAACAATAGTTTTACTGAAATGCCCCATTCGTCAAATTGGTATTTAGAGACGAATTCTAATAACTGGATTGCAAGGGAAAATGTAGATATTCGAGAAAAAACTCAAAGTTCTTCTTTTTGGACGAATAAAGGACAGAGCTATTCAAAATATAAAAGTAATAAAAGCAATTATTCTTGGAAGCAAGTAGATAGAAAATTTGATCACAATTACGACGAGGAACAACGAAATGGAAGAGAAAGTTTCCAATCTAGAAATGATGAAAATTATAGAAGTAATGAATTTCAGCATATGGTGTATCTGAACAACTTTAGTATTGCATCCAACAGATTTAAACCGAATTACGGTGTTTATGATAAATTTTCTGCAAATGTAAGATCTAATACAAGGAATGGTACTTCTTATCATCGAAATCGAGGTTGGAGTAGCGTTCCATACTCTGAAAGCCGTACATGTGCAGAAGTTGACAGATCTTCATTTGGTGATAGAGAATACAAGAATCGTAACGGATCTAAGACTAATAATGGAGAATCAGTAGAAAACTCAGATTTGAACTTTAATGTTGAAGAATTATTGATGAATAGGAAAAAGTCTGCTTTAGGTTCAAAAAGAGTGGGAAACAAATTGAAAACTAACGAAGAGCAGCTTAGGAAAGAAAATTTAACGAAAAGAAGTTCGAATTTTTCAAAGAAGAAAGATGATAAGGATAAAAGTAGTAAAATCAATCAAAGAGAACGTTTGGTCGATCTTTTAACTCGTGGTGTGCTTGAATGTTTAGTTTGCTGTGAACAAGTACATCAGAATGCTCCAGTATGGAGCTGTAGTAATTGCTATCATGTCCTGCATTTAAGATGTATTGTAAAGTGGGCAAAATCATCGAAAAGTGATTTTGGGTGGAGATGCCCTGCATGTCAGAATATCACAAGGCAAGTGCCTTATGGTTATTATTGCTTTTGCGGTAAGGTTCGTGATCCAGAATGGAACAGAGTTGATTGCCCTCACTCATGCGGGCAAATCTGTGGAAAAACTCACAAAAAAAGCTGCCCTCATAAATGTATATTATTGTGTCATCCTGGTCCTTGTCCTCAATGTACAGCCACAGTTATTAAATCTTGTGGATGCAAAAAAACCGAGAAATCAGTTCAGTGCTTCAATTCGGACGTTGTAACTTGCAGCACTATTTGTGGAAAAACTTTAAATTGCAAGATGCACAAGTGCCTTCAAAATTGTCACATGGATGAATGTGCTGATTGCAAAGAAATCATTCATCAAGTCTGTTATTGTGGTAAAGAATCAAGAGGTATTAATTGCACGAAAGATACATTAGGTGTTGATAAATATTCATGTGGAAAAATTTGTGGATTACAATTGTCTTGTGGAAACCATTTTTGTGACTCAATCTGCCACGAAGGAGAATGTCAAAAGTGTAATTTATTGCCCGAAATGGTTCTTTTTTGTCCTTGCGGAAAATCTGAAATTAAGTCTTTAACCAATGTGGAAAGAACAAAGTGCACTGATCCTATTCCAACATGTGAATTGATATGTGGCAAAAAACTAATTTGTGGACAGCCTGAAAATCGACATACTTGTGAAAGCAAATGTCACGAAGGATTCTGTCCTATTTGTCCTCTGGAAACAGTCGTGAAATGTCGTTGTGGTCATATGGATAAAATGCTGCCTTGTTCCGAACTGTTAATTGGAGCAGATGATGCAAGATGCGTTAAAAGATGTACAAAGAGACGTAGCTGTGGAAAACATAAATGTAACCAAACTTGTTGTATTGATGTTGATCATATTTGCCCTCTTCCATGCAATCGTACGTTACAATGTTCTCTGCATCGATGCGAAGAAACGTGTCATCGTGGTCATTGCCGACCGTGTTGGAGAGCCAGTTTTGAAGAATTATATTGCGAATGCGGGGCCGAAGTGATTTATCCACCGGTACCTTGCGGGACAAGGAGACCTCCCTGTTCAAAACCCTGTTCAAGGAGACATAATTGTGAACATCCACCTACTCATAATTGTCATAGTTCTAATCAATGCCCTCCTTGCACTGTGTTGACAAAAAAATATTGCCATGGTCGTCACGAGTTAAGGAAAGCTGTACCATGTCATCAAGATACGTTTTCATGTGGGTTACCCTGTAATAAGGAATTAAATTGTGGAAAACATAAATGCATTTTAGCTTGTCATGAAGGGTTATGTTTGAAAGAAGGTCAGTCTTGCATACAACCCTGTAAAGTACCAAGACCGGTATGTGGACATCCCTGTGGTGCACCTTGCCATGAAGGTCCTTGTCCTTCGGATTTACCTTGTAAAGAAATGGTTAGAGTCACATGCGAATGTGGCCATAGATACACTACTCGACTTTGTCATGATAATGCCAAAGAATATCATCGTATAGCTACTGCACAACTAGCTTCTAAAATGGCCGATTTGCAAGCTGGTCAAACCATAGACTTAGACGACGTCATAAAAGATTCCAGAAAACTTTCATATAAAACGTTAgaatgcaatgatgagtgtaagttgatagagagaaatcgtagattggcaatagctctccaaattaggaaccccgatcttagtgctaaattaacaccaCGATATTCAGAATTTATGAGACACTGGGCTAAAAAAGATGCAAGGTTTTGTCAAATGGTACATGATAAATTAACTGATTTGGTTCAGCTGGCAAAACAGTCTAAGCAAAAGTCCAGAAGTTTTTCATTTGATCCAATGAATCGAGAAAAAAGGCAGTTTGTGCATGAATATTGTGAACATTTTGGTTGTAAGTCTGTGGCTTATGATCCTGAACCAAAGCGTAATGTTGTAGCAACTGCATTAAAAGAACAGTCATGGTTGCCCAGCATGTCTTTGCTTGAGGTTATACAAAGAGAAAGTTGGCCTAGAAAAGTTCCCGCACCTGTAAATGTTAAAATGTCGGCTTTGCCTAAAGCTTCTCAGAGGACAATGGAAGTTTTACCTATCAGAGCTTCTAAAAATCAGACTGCAGTAAACAATGAGAACAGTTCCAGTAATCAATCAACATCACAAATAGATTATTTTGATTGGCAGCCTACTAATTCCTGA
Protein Sequence: MEEKKENLDDIVARSKLVATAGEFIPKFLLKSENNEFPDSNACGMPTFDNQMFINKQDEASSQNYDSGFVGISSELSTDNGYERHIDMRKGVVEENNSFTEMPHSSNWYLETNSNNWIARENVDIREKTQSSSFWTNKGQSYSKYKSNKSNYSWKQVDRKFDHNYDEEQRNGRESFQSRNDENYRSNEFQHMVYLNNFSIASNRFKPNYGVYDKFSANVRSNTRNGTSYHRNRGWSSVPYSESRTCAEVDRSSFGDREYKNRNGSKTNNGESVENSDLNFNVEELLMNRKKSALGSKRVGNKLKTNEEQLRKENLTKRSSNFSKKKDDKDKSSKINQRERLVDLLTRGVLECLVCCEQVHQNAPVWSCSNCYHVLHLRCIVKWAKSSKSDFGWRCPACQNITRQVPYGYYCFCGKVRDPEWNRVDCPHSCGQICGKTHKKSCPHKCILLCHPGPCPQCTATVIKSCGCKKTEKSVQCFNSDVVTCSTICGKTLNCKMHKCLQNCHMDECADCKEIIHQVCYCGKESRGINCTKDTLGVDKYSCGKICGLQLSCGNHFCDSICHEGECQKCNLLPEMVLFCPCGKSEIKSLTNVERTKCTDPIPTCELICGKKLICGQPENRHTCESKCHEGFCPICPLETVVKCRCGHMDKMLPCSELLIGADDARCVKRCTKRRSCGKHKCNQTCCIDVDHICPLPCNRTLQCSLHRCEETCHRGHCRPCWRASFEELYCECGAEVIYPPVPCGTRRPPCSKPCSRRHNCEHPPTHNCHSSNQCPPCTVLTKKYCHGRHELRKAVPCHQDTFSCGLPCNKELNCGKHKCILACHEGLCLKEGQSCIQPCKVPRPVCGHPCGAPCHEGPCPSDLPCKEMVRVTCECGHRYTTRLCHDNAKEYHRIATAQLASKMADLQAGQTIDLDDVIKDSRKLSYKTLECNDECKLIERNRRLAIALQIRNPDLSAKLTPRYSEFMRHWAKKDARFCQMVHDKLTDLVQLAKQSKQKSRSFSFDPMNREKRQFVHEYCEHFGCKSVAYDPEPKRNVVATALKEQSWLPSMSLLEVIQRESWPRKVPAPVNVKMSALPKASQRTMEVLPIRASKNQTAVNNENSSSNQSTSQIDYFDWQPTNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01309059;
90% Identity: iTF_01309059;
80% Identity: iTF_01309059;