Rarc041537.1
Basic Information
- Insect
- Ricinus arcuatus
- Gene Symbol
- Zmiz1
- Assembly
- GCA_027475445.1
- Location
- JAOXJT010000013.1:1058090-1061396[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.13 1.4e+03 0.3 0.7 4 24 335 355 332 360 0.88 2 2 1.8e-25 1.9e-21 76.8 4.8 1 50 416 465 416 465 0.98
Sequence Information
- Coding Sequence
- ATGCACGGTATGCCCCATAACGTTATGGGGAATCAAAACTATGGCGGTAATTTTCCTAACCAAAGAGGTCACGCTCCGATAGGGATGAACGATCCGTCCGGGGTCATGGGAAATATGAGTAACATGGGAATGGGGATGAATAATTTCAACACCATGAACTCCATGGCCCCCATCGGTAACATGCCGATGAACGGCAACATGCACTGCAACATGATGGGTCCCGGACCCGGAGTTAACAAGATGGGAATGCAGGGACCTGGAAATCAGGTATATCCCAGGCGAATCTCCCCGTATCCGAGCCCCGCGATGCATATGAATCAGAAACGCGGCGGCATTTACCCGGGTCCCGGACCCGGTCCCGGACCGATGCAGTCTGGATACAATCCTAACAACCCAAATCAATATTCCCAGGGTTATGGAAATACTAGGTCAAATGTTCCTTCCCAATACCAGAATCAGCCCGGAATGCAAAATATGGGACCTGGTATGGGATCTTTCGTTCCTGGATCCGTGGTTCGAGTGGCGTCTGGGAGTCCTTCCGGTCAGGACGTGGGAACAATGCGAAGCAACATGTCATATCAACACAGTCCTATTCCTGGCAATCCGACGCCTCCTCTCACGCCGGCCGGTTTGATGCCACCCTATGTGAGCCCCAACGCGGACGTTAAACCAAATTTTGTGGACATTAAGCCTCCGCTGATGATGCAGAAAGATGACGAACTGAGGTTAACCTTTCCCGTTCGAGATGGGATCATCTTGCCGCCCTTCAGGTTGGAGCACAACCTGGCCGTGAGCAATCACGTGTTTCAGTTGAAACCCACGGTTCATCAGACTTTGATGTGGAGGTCTGATTTAGAACTTCAGCTGAAATGTTTCCACCATGAGGACAGGCAAATGAATACGAATTGGCCAGCCTCCGTGCAAGTGTCAGTGAATGCTACGCCTCTGAGCATTGACAGGGGAGAAAACAAAACGTCACACAAACCACTATACCTGAAGGATGTTTGTCAACCTGGCAGGAACACAATACAAATTACTGTTTCTGCTTGTTGTTGCTCCCACCTCTTTGTTCTTCAACTAGTCCATAGGCCGAGCGTTCGAAGCGTTCTTCAGGGTCTCTTGAGGAAGCGGTTGCTTACGGCGGATCATTGCATTGCCAAGATTAAACGGAATTTCAGCAATAATCCGACAAACAGCGGAAGTTTACCCACGGATAGGGACGCAGTGGAGCAAACCGCCCTGAAAGTTTCCATGAAGTGTCCGATAACGTTCAAAAGAATAACACTGCCCGCAAGAGGACACGACTGCAAGCACATTCAATGTTTCGATCTGGAGTCATATCTGCAGCTCAACTGCGAAAGAGGCTCCTGGAGGTGTCCCGTTTGCAACAAACCGGCGCAACTGGAAGGTTTGGAGGTGGACCAATACATGTGGGGTATATTGAACACGTTAAACAGTTCGGATGTCGAAGAGGTGACGATAGATTCTGCGGCAAATTGGAAACCGGCGAAAAACCTGACGCAGGGAATTAAAACGGAAGAGGAAAACGAATCATGTGGAGGAAATAAAAAAATAAACAAAGCCATGTCACCCGGGAGCATGACATTGCCTACTCTAAACAACTGGGACAACATGAACCAAGCCATGTCACCATATATACCACCCGATATGAATAGTATAGCAAGCGGATCGATGATGGCTGGAATGCCGACCACCTATGGTAATAGCCCTATGAACAGGGGAGCGTCATACGATATGGTCTCGAGTCCACTTCAGAATAAATATTCTAACGGTGGACCGTTGTCTCATCTTAGCGAATCCGTCAATTCTCTGGATCCTTTGAACGCCATGGAGAAATCACTGAATGAACAGATGCCCAACACCCCCCACACGCCGCACACTCCGCATACGCCAATAGGGACACCGCACACTCCGGGCGGACCCCCGAGTGTCCCTCCCAACGATTCATCAAATCAAAACACTAGTGGTGAAGTTACCAACGACCACTCGACGGATTTGCCATCTGATCTCAATTTCGATCCTGCCGCAGTTATTGATGGCGAAGGAACTGGGCAGGAAGGTCTCAATCTTCTACCGGACAATGTCGTCGATCCAATGGAACTTTTGTCGTATTTGGATCCGCCGGATCTTGCAACCCCTCCAAGCAGCGGTGCCAGCAGTACGGGACACATTGGCGTAGCTACTAACGATGATATCCTCGCTCTCTTCGAATGA
- Protein Sequence
- MHGMPHNVMGNQNYGGNFPNQRGHAPIGMNDPSGVMGNMSNMGMGMNNFNTMNSMAPIGNMPMNGNMHCNMMGPGPGVNKMGMQGPGNQVYPRRISPYPSPAMHMNQKRGGIYPGPGPGPGPMQSGYNPNNPNQYSQGYGNTRSNVPSQYQNQPGMQNMGPGMGSFVPGSVVRVASGSPSGQDVGTMRSNMSYQHSPIPGNPTPPLTPAGLMPPYVSPNADVKPNFVDIKPPLMMQKDDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLSIDRGENKTSHKPLYLKDVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKRNFSNNPTNSGSLPTDRDAVEQTALKVSMKCPITFKRITLPARGHDCKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNSSDVEEVTIDSAANWKPAKNLTQGIKTEEENESCGGNKKINKAMSPGSMTLPTLNNWDNMNQAMSPYIPPDMNSIASGSMMAGMPTTYGNSPMNRGASYDMVSSPLQNKYSNGGPLSHLSESVNSLDPLNAMEKSLNEQMPNTPHTPHTPHTPIGTPHTPGGPPSVPPNDSSNQNTSGEVTNDHSTDLPSDLNFDPAAVIDGEGTGQEGLNLLPDNVVDPMELLSYLDPPDLATPPSSGASSTGHIGVATNDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00362932;
- 90% Identity
- iTF_01309057;
- 80% Identity
- iTF_01309057;