Ccol000065.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- Zmiz1
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000009.1:2983189-2987342[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.086 4.8e+02 0.6 0.9 4 24 353 373 350 378 0.88 2 2 2.9e-11 1.6e-07 30.9 1.5 24 50 432 458 429 458 0.94
Sequence Information
- Coding Sequence
- ATGCACGGGATGCCTCACAACGTGATGGGGAACCAAAATTACGGCGGGAATTTTCCTAACCAAAGAGGCCATGCTCCGATCGGAATGAACGATCCGTCTGGCGTCATGGGAAATATGGGCAACATGGGAATGGGGATGAACAATTTCAATCCCATAAATTCGATGGCGTCCATGGGAAACGTGCCGCCGATGAACGGAAACATGCACTGCAACATGATGGGCCCAGGACCTGGAATGAACAAATTGGGAATGCAGGGTCCGGGGAATCAAGTGTATCCGAGAAGAATATCTCCATATCCAAGTCCCGCGATGCACATGAATCAAAAACGTGGCGGCGGAGTGTATTCGGGTCCAGGACCTGGCCCCGGTCCCATGCAATCGGGATTCGGACCGAACAATCCTAATCAGTATTCCCAGGGTTATGGAAATACGAGGTCAAATGTTCCTTCCCAATATCAGGCCCAGTCAGGTATGCAGAACATGGGACCTGGTGTCGGATCTTTTGTTCCTGGGTCCGTAGTCCGAGTTGCATCAGGAAGTCCATCTGGACAAGACGCCTCGATGAGAGGAAACATGAGTTATCAGCACAGTCCGATACCCGGAAATCCGACTCCTCCTCTCACGCCGGCCGGTTTGATGCCTCCGTACGTGAGCCCGAACGCGGATGTCAAACCGAATTTCGTCGACATCAAACCTCCCCTCATGATGCAAAGTAAGTCCGAACGGATTCCTTTAATGGTGAGGGTGGGTTTGGGGTGGATTGTTCTAGGAAGACTGAGGCTAACGTTTCCCGTTCGGGACGGAATCATACTTCCGCCATTCAGGTTGGAACACAATTTAGCGGTTAGCAATCACGTGTTTCAATTAAAGCCCACCGTTCATCAAACTCTGATGTGGAGATCGGATCTGGAACTCCAGTTGAAGTGTTTCCATCACGAGGATAGACAAATGAACACGAACTGGCCGGCATCCGTTCAGGTTTCGGTGAACGCGACGCCATTGAGCATAGACAGGGGAGAGAACAAGACCTCGCATAAACCATTGTACCTAAAGGATGTCTGTCAACCCGGGAGGAACACCATTCAGATCACTGTGTCTACTTGTTGTTGTTCCCACTTGTTCGTACTTCAGCTAGTCCATAGACCGAGCGTGAGAAGCGTGCTTCAAGGTCTACTAAGGAAACGTCTTCTCACCGCCGATCACTGCATCGCTAAGATCAAGAGAAACTTCAGCAATAATCCGACCAACAGCGGAAGCATGTCGGCGGATAGGGACGCCGTCGAACAGACGGCTCTCAAGTGCTTCGATCTGGAATCGTACTTACAACTGAACTGTGAACGGGGCTCTTGGAGATGTCCGGTTTGCAACAAACCCGCGCAGTTGGAAGGCCTGGAAGTTGATCAGTACATGTGGGGGATATTGAACACGTTGAACAGTTCCGACGTGGAAGAAGTGACGATCGATTCGGCGGCCAATTGGAAACCCGCAAAGAGTCTCACTCAAGGGATCAAAACGGAAGAGGAAAGCGAGTCGTGCGGCGGAAGCAAGAAGATGAACAAAGCCATGTCTCCGGGAAGCATGACGTTACCTACGTTGAACAGTTGGGACAACATGAACCAAGCTATGTCTCCCTACATTCCACCTGATATGAACAGTATAGCAAGTGGTTCCATGATGTCGAACACGCCTCCCTCCTATGGAAACAGTCCAATGAACAGAGGGAATTGCTACGACGTCGTTTCGAGCAGTCCCCTCGGCAACAAATATTCGAACGGCGGTGGACCTTTGACTCACCTAAGCGATTCCGTGAATTCGTTGGATCCGTTGAACGCGATCGAGAAATCGTTGAACGAACAGATGCCGAACACGCCTCACACTCCACACACGCCGCACACACCTGTCGGAACCCCGCACACGCCAAGTGGACCCCCCAGCGTACCGCCGAATGACATATCAAACCACAACAACAGTGGTGAAGTTACCAGTGATCACTCGACGGATTTGCCATCTGATCTCAATTTTGATCCAGCAGCTGTCATTGATGGCGAAGGCACCGGTCAGGAAGCCCTGAACCTTTTACCAGATAACGTCGTCGATCCGATGGAACTTCTCTCTTACCTGGATCCGCCAGACCTCGCGACACCTCCCAGTAGCGGAGCCAGCAGCACGGGACACACGGGAGTAGCAACAAACGACGATATCCTCGCTCTCTTCGAATAA
- Protein Sequence
- MHGMPHNVMGNQNYGGNFPNQRGHAPIGMNDPSGVMGNMGNMGMGMNNFNPINSMASMGNVPPMNGNMHCNMMGPGPGMNKLGMQGPGNQVYPRRISPYPSPAMHMNQKRGGGVYSGPGPGPGPMQSGFGPNNPNQYSQGYGNTRSNVPSQYQAQSGMQNMGPGVGSFVPGSVVRVASGSPSGQDASMRGNMSYQHSPIPGNPTPPLTPAGLMPPYVSPNADVKPNFVDIKPPLMMQSKSERIPLMVRVGLGWIVLGRLRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLSIDRGENKTSHKPLYLKDVCQPGRNTIQITVSTCCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKRNFSNNPTNSGSMSADRDAVEQTALKCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNSSDVEEVTIDSAANWKPAKSLTQGIKTEEESESCGGSKKMNKAMSPGSMTLPTLNSWDNMNQAMSPYIPPDMNSIASGSMMSNTPPSYGNSPMNRGNCYDVVSSSPLGNKYSNGGGPLTHLSDSVNSLDPLNAIEKSLNEQMPNTPHTPHTPHTPVGTPHTPSGPPSVPPNDISNHNNSGEVTSDHSTDLPSDLNFDPAAVIDGEGTGQEALNLLPDNVVDPMELLSYLDPPDLATPPSSGASSTGHTGVATNDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01251438; iTF_01308373; iTF_01309057; iTF_01165215;
- 90% Identity
- -
- 80% Identity
- -