Rarc003930.1
Basic Information
- Insect
- Ricinus arcuatus
- Gene Symbol
- BTBD7
- Assembly
- GCA_027475445.1
- Location
- JAOXJT010000004.1:1585640-1590411[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-13 1.1e-10 42.8 0.0 9 98 125 215 119 227 0.82 2 3 1.3e-07 7.8e-05 24.0 0.0 21 89 257 338 220 341 0.79 3 3 5.5 3.4e+03 -0.6 0.0 81 106 355 380 348 383 0.85
Sequence Information
- Coding Sequence
- ATGAGTGACGCGATGGGTGCTTCCTCATCAATCGTGTCAGGAGAGCAGGACTCGTCACGTCGTGGAGGAATGACAGTGTCAAACACAGATGAGCACCTGTCAACTATTTATCAGAGAGAAAGGAAGAGGAAAGTTGCAGGATTCGCCACATTGAGGAAAAAGTTCATAAGAAAGCGGAGGTCTTCAAAAACATGTGATCATGGAAGAGTTATGAGAGAATTGGTTTCTGATTGGAGTCCACTTGAGATTGGTTCTCTTTTAGAAGAATATGAAGCTTTAGCAGCTCTGAAAGATCTATCCATGCAGGCTGAATTGGCCAGACCTCCAGCAGCAACATATAAACAGGATTTGTGCACTTTATATGATTTTAAATGTTGTACAGACATTGATCTAGTATTTAGAGGTGCTTGTTTTCCAGTTCATAGAGCATTACTATCAGTGAGGTGTCCATATTTTCGTGAACTTTTAGCAGGTTGTCCTGGTCATGGTGCTCGTATATGTTTAGAATTAAGAACTCCAGGTGTGGATGTTCAAACATTTTCAGTCCTTCTAAGATATTTATATACTGGAGATATAAAGCCTGAGGATGGGGTGGATATTGCTGTACTAAGGCAGCTAGGGGATGAATTTGGTTTACCTGCTCCTTTAGAAAGAGATTTAAGAACATTGTTGGATACAGGAGATTATGCAGATGCTGCCTTAGTTTTTACAAATGGAGATAGTCAAAGATCGGAATATGCTACTTCAGAATATGGATTTAGACCAAAAGTTGAGCTTCCATGCCATAAAGCAATTTTAAGCGCGAGATCTCCTTTTTTTAGAAATATAATACAGCGTCGAACACGATCGGGTGAAGAACATACTGAACGAGCTCTAAATATGCTTACAAGGATCGTTCTCGATGAATCAGTCATTCCAAGAAGATATGCGAGATTATTGCTTCATGTTATTTATTTAGATTCAGTAGATCTATCATTGATATTGAGGGGATCTTGTGCTTCATTGCTTAGTCTCAGTGAAGCTCCAGCATTGTCTAGACAACCGTCGAGATTGTCAGCATTAGAAGAGGCAATGGAACTATATCAGATAGGTCGATTTTTAGAGCTGGACATTTTAGCTCAAGGATGTGAAGATATTATACTCGAAGGTCTTACACTGGATTCCCTACCTACTGTACTTCGGTGGGGCAGCCAACCTCATGGATCTGCTTGGGTTAAAAGACAAGCACTTCATTTTCTCAGGGAAGAATTCCAGGCGATCTCTGGTGGACCAGTTTTATTTCAGCTTGATAAATGTCATTTATTGGAAGCCCTTCAAAGTTCTTTTCTTCAGGCTAGTGAGCTTGAAGTGCTTCAGGCTGTGTTAAAATGGGGCGAACATCGACTTATGCGAAGCATGGAGGACAGGGAACCGAATATATTGAGCCATACTGCCCATTCTGTAGCGAAAAAGGGTATAAAAAAACGGGATTTGAGTGATGTTGAACTCCGAGAAATTTTGTCTGATCTTTTGCAGCATGTGAGAATGGATCACATTTTACCACCCAATAATGATGTATTAGCACAAGCAATAAGAAGAAGACTTGTAAGTACTCCACCTAGTCATATGATTGGTGGGGACAGAGAATCATTGAGGGTAAACGCTTGGATTAGAAGCGGAAAAAATAATGGATTGTATGTTAGGCCAAGGTTATTCATGCCTTACTATGAAGAAATTAAGGCAATATTCGAAGATCAAATGTTGCATCAATCGGAATTACTAAGATTGAGGAGATCACGCTATATAGCAGACATACCAGATACTTTGTACATGGTGGAAGACAAACCGAGGCCCATGGGACTTGATGTTCTGGTTGCAGCCATTCCGGTTCCAGATCCTGCAACCATGGCTGCTATGGTACGTCGTGAACAGAAAGTACGTGCTTCGCCTTGTTGCCAAAGGGCTCTTGCCTTGCCACTTTCTTCTAGACGAGAAATCAATAGACAAGTCAGACTTCGTGTAGTTAGAGAATTTAATTTGCCTGACCAAGTAGCCGATTTATTGGAAAATGCAGGTTGTTATTGTGTTGATCCCGAAGATATAGAATACAATTCTGCATCAGGGTCAAGACAAACAGAATCATCCATTTCTCATTTTAATGTTCATCCTCCGACTTTGCGAGATCACCCATTCCGATCTAATTTTGAGCCAGAGTCCAGTTCTTGCAGCGATGGCCATTTGTCCGATGTCATGCCCGATGTTGCGATGGCTACGTCTAGTCTCAGTCAATTGCAACTGCAAGAACAAGAAATGGAATTGGATCTCGGGGATGGTACGAGTCATACGAGCGCAAATGCAAGGCCCCGTCTTCCATCTTGTCCCCGTCAGCCTTACAGGCCCAGTCACCGTTTTAAATAG
- Protein Sequence
- MSDAMGASSSIVSGEQDSSRRGGMTVSNTDEHLSTIYQRERKRKVAGFATLRKKFIRKRRSSKTCDHGRVMRELVSDWSPLEIGSLLEEYEALAALKDLSMQAELARPPAATYKQDLCTLYDFKCCTDIDLVFRGACFPVHRALLSVRCPYFRELLAGCPGHGARICLELRTPGVDVQTFSVLLRYLYTGDIKPEDGVDIAVLRQLGDEFGLPAPLERDLRTLLDTGDYADAALVFTNGDSQRSEYATSEYGFRPKVELPCHKAILSARSPFFRNIIQRRTRSGEEHTERALNMLTRIVLDESVIPRRYARLLLHVIYLDSVDLSLILRGSCASLLSLSEAPALSRQPSRLSALEEAMELYQIGRFLELDILAQGCEDIILEGLTLDSLPTVLRWGSQPHGSAWVKRQALHFLREEFQAISGGPVLFQLDKCHLLEALQSSFLQASELEVLQAVLKWGEHRLMRSMEDREPNILSHTAHSVAKKGIKKRDLSDVELREILSDLLQHVRMDHILPPNNDVLAQAIRRRLVSTPPSHMIGGDRESLRVNAWIRSGKNNGLYVRPRLFMPYYEEIKAIFEDQMLHQSELLRLRRSRYIADIPDTLYMVEDKPRPMGLDVLVAAIPVPDPATMAAMVRREQKVRASPCCQRALALPLSSRREINRQVRLRVVREFNLPDQVADLLENAGCYCVDPEDIEYNSASGSRQTESSISHFNVHPPTLRDHPFRSNFEPESSSCSDGHLSDVMPDVAMATSSLSQLQLQEQEMELDLGDGTSHTSANARPRLPSCPRQPYRPSHRFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01308807; iTF_01165003; iTF_00362649; iTF_01251194;
- 90% Identity
- iTF_01308807;
- 80% Identity
- iTF_01308807;