Rfer006014.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- RCOR3
- Assembly
- GCA_014462685.1
- Location
- JAACXV010000015.1:32429-38400[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2e-09 2.5e-06 27.8 0.0 3 46 114 157 112 157 0.97 2 3 2.4 2.7e+03 -1.1 1.0 36 44 254 262 252 263 0.90 3 3 2.8e-12 3.2e-09 37.1 0.0 3 46 362 405 360 405 0.97
Sequence Information
- Coding Sequence
- ATGGTCCTTGCCGAGAAAAATAACGATAATGTCAGAAATGGCCGTAGAAGCCGGGGGCCCAGTCCTAATGGCCATGTCCAAGCCGAATCCACAAGCGAAGATGAAAGCACAGTACCGGTAGATAAAATTCGTGTTGGCCGAGACTATCAAGCAGTATGTCCAGAACTTCAACCAGAATGTCAACATGCCATACCTGATGCTAAATtggaAGACTATATTGTATTAGCAAAGGATAAATATGGTTATAATGGAGAGCAAGCCTTGGGGATGTTATTCTGGCACAAACATGACCTTGACCGTGCTGTGTTAGACTTAGCTAATTTTACCCCTTTTCCTGATGAATGGTCAGTTGAAGATAAAGTACTATTTGAACAAGCATTCCAATTTCATGGTAAAAGCTTCCACAGAATCCGACAAATGTTGCCAGATAAAAGTATAGCCAGCTTGGTGAAGTACTACTACAGTTGGAAGAAGACCCGCTCTCGCACAAGTCTAATGGACAAACAAGCTCGTAAACTGAACACACCAAAAGATGATGGTGCTGAAGAAGGAGCTTCAGACCAAGGATCCAATGAGGAATCTGATCACGATGAAAAGAAATGGACACTCCATAGAGGCGTCCGACGCAAAAACGTTTCGCCTCATCCAGGCCAATCTAGCTGTGATTCTACCGCTTCTATACAGGGTGAGGGGGGATCCTGTTCGAATTGCGACGTGTACTGCACCGTGACCCAACAAACTCCAAAGGGAGCGCTGTGTAACAGCTGCTATCAGCATTGGAGGCGTACAGGTATGGCGCGGCCTACATCAGGCCCGGTGGGCGGCAAGAGGGGTTCGGGCCCGGGCGGTTCCAGGGCCCGACGGAAACCCCCCAAAGGAATGCATATCAACCACGACGATCTGGCGACCATGGCGTCTGGAAATGCCGGCACCCTCCTGCTGCGAGCTATGGAACGCGAACTGGACTCATTGCAGAGACAAATTCAGCAAAATAAGCAGAACGTTAGTTCGCTGAAACGTAAACACGCTGATTCTCTGGAAGACCTCCGCCCGTCCAACGAGAACTCTCAGAGGCCGAACTCTAGATGGACCAATGATGAAATGATGTTAGCCGTTAAAGGCTTTAGGAAATATGGTAAAGACTTCAAGGCCATCGCCGAGATGCTAGGCAACAAAACTGAGCACTACGTACGCACGTTCTTCGTTAACTACCGTAGGAAATACAGCCTGGATGAGATCATCAAAGAATGGGAAAGAGAACACGGTACTGTTCCCGACGATAATGGAGAAACTAAGATTGAAAACGACAATGAAAGCGATGAAGTCATCTGTCTATCGCCAAGTCCTCCGTCGTCCAAACAGGTCAAGAATGGGGGCAGAGTGAACTCCCAGGCATCCCAGAAATGA
- Protein Sequence
- MVLAEKNNDNVRNGRRSRGPSPNGHVQAESTSEDESTVPVDKIRVGRDYQAVCPELQPECQHAIPDAKLEDYIVLAKDKYGYNGEQALGMLFWHKHDLDRAVLDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDKQARKLNTPKDDGAEEGASDQGSNEESDHDEKKWTLHRGVRRKNVSPHPGQSSCDSTASIQGEGGSCSNCDVYCTVTQQTPKGALCNSCYQHWRRTGMARPTSGPVGGKRGSGPGGSRARRKPPKGMHINHDDLATMASGNAGTLLLRAMERELDSLQRQIQQNKQNVSSLKRKHADSLEDLRPSNENSQRPNSRWTNDEMMLAVKGFRKYGKDFKAIAEMLGNKTEHYVRTFFVNYRRKYSLDEIIKEWEREHGTVPDDNGETKIENDNESDEVICLSPSPPSSKQVKNGGRVNSQASQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01215890;
- 90% Identity
- -
- 80% Identity
- -