Pcyl009235.1
Basic Information
- Insect
- Platypus cylindrus
- Gene Symbol
- rcor2_1
- Assembly
- GCA_949748235.1
- Location
- OX456490.1:7352648-7357230[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.1e-10 8.7e-07 28.9 0.0 3 46 127 170 125 170 0.97 2 4 2.7 2.6e+03 -1.4 0.1 31 38 227 234 224 236 0.88 3 4 0.74 7.1e+02 0.4 0.2 36 44 268 276 260 277 0.84 4 4 1.6e-10 1.5e-07 31.4 0.0 3 46 379 422 377 422 0.97
Sequence Information
- Coding Sequence
- atggtGCTAGCTGAGCGGAATAGTGAAACTGCAAGAAATGGTAAACGAAGCCGAGGACCAAGTCCTAATGGAACATCGGTCTCTACAAGCGAAGAcgaaaTTCCAGCTGATAAAATTCGTGTAGGAAGAGATTATCAAGCAGTTTGCCCTGAATTACAACCTGAAGCTCAAAGGAAACCTGAACAACTTGCTGATCGAGCTTTATTAGTTTGGTCGCCAACTAGTACAATTTCAGACAACAAATtGGATGAATACATAATACTTGCTAAAGATAAATACGGATATAATGGTGAACAAGCATTAGGAATGTTATTTTGGCATAAACATGATTTAGATAGAGCCACATTGGATTTAGCAAATTTTACACCATTTCCAGATGAATGGACGGTGGAAGATAAGGTTTTATTTGAACAGGCATTTCAATTCCATGGGAAAAGCTTCTTTAGAATAAGACAAATGTTACCAGATAAAACAATAGCAAGTTTAGTCAAATATTACTATAGCTGGAAAAAGACAAGATCGCGGACAAGTTTAATGGATAAACAAGCACGCAAATTGAATACACCAAAAGAGGAGGGTGGTGAATCGGCTGGCTCAGAACATGGTTCAAATGGCGAATCAGATCACGACGAAAAgAAATGGACATTCCATCTGGGTATCCGTCGTAAGAACGGTTCGCCCAACCGTACTGGTCAATCTTGTAGTGATTCTACTGCTACCATTCAgGGTGAGGGTGGTTCCTGTTCAAACTGCAGCGTATTCTGCAACGTCACTCAAGTTACCTCAAAAGGGCTCATGTGCAACAGCTGCTACCAGCACTGGAGGCGAACGGGATTGCAACGTCCCACTTCTGGTCCAACAACTGGTGGTAAACGGGGGGTTGGACCGGGAGGATTGAATCGTGCCCGCCGTAAACCCCCCAAGGGTATGCACATCAACCACGACGATTTGGCAACAATGGCATCGGGCAATGCTGGTACCCTTTTATTAAGAGCAATGGAAAGGGAACTTGATTCGTTACAAAGACAAATTCAACAGAACAAACAAAACATTAGTTCATTAAAACGTCGACATGCAGACAACATCGATGATTTACGCCCATCAAATGACACAGTGGCTCAACGTTCAAATTCACGATGGACCAACGATGAATTGATGCTTGCCTGCAAAGGTTTTCGTAAATATGGCAAAGACTTTAAGGCTGTTGCCGAAATGTTAGGAAGTAAAACGGAACATCTTGTTCGTacattcttttttaattatcgaAAACGGCATAATTTAGATCAAATTATCAAAGAATGGGAACGAGAAAATGGCCAATTAAGTGAAGACCATGTCGAATCAAAAATAGAAACTGACGACAATGATGATGTCATTTGCTTATCACCAACACcacagaaaaaaattaaattaaatgggAAATGA
- Protein Sequence
- MVLAERNSETARNGKRSRGPSPNGTSVSTSEDEIPADKIRVGRDYQAVCPELQPEAQRKPEQLADRALLVWSPTSTISDNKLDEYIILAKDKYGYNGEQALGMLFWHKHDLDRATLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFFRIRQMLPDKTIASLVKYYYSWKKTRSRTSLMDKQARKLNTPKEEGGESAGSEHGSNGESDHDEKKWTFHLGIRRKNGSPNRTGQSCSDSTATIQGEGGSCSNCSVFCNVTQVTSKGLMCNSCYQHWRRTGLQRPTSGPTTGGKRGVGPGGLNRARRKPPKGMHINHDDLATMASGNAGTLLLRAMERELDSLQRQIQQNKQNISSLKRRHADNIDDLRPSNDTVAQRSNSRWTNDELMLACKGFRKYGKDFKAVAEMLGSKTEHLVRTFFFNYRKRHNLDQIIKEWERENGQLSEDHVESKIETDDNDDVICLSPTPQKKIKLNGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01351645; iTF_01243490; iTF_01307181; iTF_00196151; iTF_01238956; iTF_00444059;
- 90% Identity
- -
- 80% Identity
- -