Rfer020761.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- bun
- Assembly
- GCA_014462685.1
- Location
- JAACXV010000013.1:124390-137332[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.29 3.3e+03 -1.3 0.0 14 26 139 151 138 154 0.90 2 2 4.1e-22 4.7e-18 65.4 2.0 1 53 311 363 311 367 0.95
Sequence Information
- Coding Sequence
- ATGGCAACCGTATCGAACAAGAATAAGAAAGGCACGGTGATCCATAGGACGACCAGTGAAACCTTACGACTCGGCGAAGACATACTTACCGGTCAAATGAGGAGTGGGAATTCCGTGAGGAAAAAGTCGCAGGTGACATCGCCAAGTTGTTCCTTTCAAATAACTGGCGTTATGACCAGGTACGATCTAGAGGATGAATCAGCTGACGATTTGGATGAGAGTCACACCGATGAAATATCCAGAGTAACCGACAATGAAACTCCAAGCTTTTCGGAAGATTCTAAAGATGAACAACAACCGATAGGGTTCTCTCCTCCGTCTCAACagattatatataatcaaaatcttAGCAATGCAAATTCAGTGGTGTCCCCTGTTGAAAAACATATTCCGGCCTCTGAGGATGAAAAAGTGGAGAAGGTCGAGAAGCCGAAATCTAATATCAATGATTTAGGAAGGTTTAGAGTGGTGAAACTCGGTAGTATGGTACCGTTTAGTAGAGGAAGATGGACTTGTTACGATTATTTGGATGAGACATCGGAAGGAAAAACGTCCATgaatataaatacatcagtGACCACGATATCTTGTTGGAATGCAACGTCCAAGCctacttatttatatacaggGTCAATCTTAATGCCTGAAGAGATACCAATATTCGTCCCACTTTCAACAAATAATCTACATCCATTAAATACGGTTAATAGCCTGCCAAAATCGCGTCATGTTAGTTTTACTAGTTGTAACAGCATTGAAACGGTTatcaataattcaaatttagactccaatcaaaacaaacaaatatattcTACAGTTGCTCAAAATAACGAAATGATGATATCTACTAGTGATCACCATAGTTCAAATGACAATAGTTGtgtTTCAGCTCCATCTTCAACAACAATAGACACTAAAATAGAACACGCCTTGGATGTTGTTAAGAATCATTTGACACATGCGGTACGTTTGGAAGTTGAGGAATTGAAAGTGAAGATAAACGAATTAGTTGAACGCATATCACACTTGGAATATGAAAATGATGTCTTAAGAGCAAACGTAACTCCAGATGTATTGGCCACGCTtggcaattttagaaaacactaa
- Protein Sequence
- MATVSNKNKKGTVIHRTTSETLRLGEDILTGQMRSGNSVRKKSQVTSPSCSFQITGVMTRYDLEDESADDLDESHTDEISRVTDNETPSFSEDSKDEQQPIGFSPPSQQIIYNQNLSNANSVVSPVEKHIPASEDEKVEKVEKPKSNINDLGRFRVVKLGSMVPFSRGRWTCYDYLDETSEGKTSMNINTSVTTISCWNATSKPTYLYTGSILMPEEIPIFVPLSTNNLHPLNTVNSLPKSRHVSFTSCNSIETVINNSNLDSNQNKQIYSTVAQNNEMMISTSDHHSSNDNSCVSAPSSTTIDTKIEHALDVVKNHLTHAVRLEVEELKVKINELVERISHLEYENDVLRANVTPDVLATLGNFRKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -