Rexs000257.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rhorus exstirpatorius
Gene Symbol
grn
Assembly
GCA_963564615.1
Location
OY751313.1:4787092-4801262[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.7e-17 2e-13 50.1 2.1 1 34 558 590 558 592 0.97
2 2 1.7e-17 5e-14 52.0 6.8 1 35 618 651 618 652 0.97

Sequence Information

Coding Sequence
ATGAGGCACGCAGCTACGGAGGAGGCGATGAAGGAGAGTCTCTTGAAGCAGGAAGTCAAGATGGAGTGGGAGGGTCGTCGTCCGGGGGATAGTTCGCCGCAGGTTCCGCGTACAGCCGAGGAACAGGCCGGTGGTAGTCCCCAAAGCGTGATAACGACGCGACGACACGTGAGGACGATAACGACCGCGGGACACATCACGGAATCGATTGCCGACGCTGAGCCCGAATCACCGGAGCCTAGTCCACCGTCAGTGAAACAGCCAGTCcacaacaataataacaataatattaaattgTTGCAACCGGTGATTCATCAACAACAGGATTCTCAGCAACGTCAGCAGCAGGATCAGCAGCATCAGGATCAGCCGCTGGAACAGGCGCATCGATACCAGGATAatcatcatcagcatcatcagcatcagcagcagcatTACATAAACATATCGCAGGGTAGCAGCCCCGAGGATCAGCAACGAGGCGTCGAACCGCCACAACAGCATCAAGTTGTCTATGCAACGACCAACGGCGAGGACATGCAGCTCGAGGGTCAGGAGTCCAGCGAGGGTACCATAACACTCGCGGTCAAGGAACAAACCAGGTACGGTACACCAGGGACCGGTGAAAGAGCGGAAGTAGAGCGAGTATTTGTTTACGCGGATGACGGTGGTGATGCTAGGCGTCCTGGTCACGTGATAACCGTCCAGGTCCACGAGCACCGACGTCATCATCCCCAACagcaccatcatcatcatcatcaccatcaacagccgcagcagcagcagcagcagcagcagcagcagcatcagcacGGTCAACAACATCAGAGATTCAGTCCCCAGGAGAATGGTCACGTGACGAGATATCAGGTTTCACCGGTTGTCCCAGCTGAAGATTACGAGCCGAGCGCAATGGCGACGTCTCAGGCGGGAACGGTACAGCTTGGTTCTCCAGCACCAACATACTCACCACCGGTCGATGGAAATCGAACGACTCAGCATCAGTTGGTCGCTACCGGATACGCGGAAAGTGGAAACACCACTGTAAAGTACGAGGCGATAGCAGCTGTACCAACCGACGCGATAAAACCCACCGGTACTTATACGACTCTGGAAACCGTCGCGTTACCGTCCACTCAACCTGTTCAGTACACCCAATACGTCACCGACACGTTTCAACATACGAGCTACACCTACGCGAAACCTGGAGACATCACCTATCACGCGTATCCCAGCAGTCAGCCTAGCAGCAGATCTTCCGAGGTGGAATCTCCAGCAGGAGTGTTCATCAAGAGTGATCCGACTCTGACATCAACGTCCCTGCTGGTACCCGGTAGAACAGCACCGCTTCATTACGAGCCACCGAATTCGCCGGGTTCACAGGTCGCGATTTACGGCACGGCAACCGGGCCCACCTTTCAGTTCGTCAAATCAACCGGTGATCAATACTGGCATTCCGGTGGATCAGCCTCGCCGACTACCCTCGAATACGTTCCGGCGTATTCGGGCATGCCAGCGATCTCGACCAGCGACGCAACCAATATGCTGTATTCCGGTGGTAATTACAGTGTCTCGGGGGCAGGCAATGGTTCACCCCCGACATGGCCCATTCAATTGCCGGGAGCGGATGAAAATTTCGACGGGCAAATACCGAATCCCCAGTCCAAGGAGTGCGTGAATTGCGCTGCTAGCTTCACGCCTCTTTGGCGACGCGACGGTACCGGACACTATCTGTGCAACGCTTGTGGAATTTACAGCCGAATGAACGGGGCAAACAGACCACCTGTGAGATCCTGCGGTGGCAAGATAAAACACACCGTTGCACCGTCGGGACGAAGAACCGGTGTGCAATGCGCGAATTGCACGACCAGCAATACAACGCTCTGGCGAAGAAACAACAATGGCGAGCCCGTATGCAACGCTTGCGGTCTTTACTTTAAACTTCACAACGTAAACAGGCCAATGAGCATGAAGAAAGAGGGAATACagacgagaaagagaaaaccaaaaaatcattcGGGAATGGGGGGCGGGGGAATGGCAGGACCAAGCGGGATTCACAAGACCGAAATGAAATCCAACTTACTCGtgGACACGAAGCTGCCACTGAACATGTTCACGAGCGGTGGTGGGAATGACGGGAGCGAAGAACAACATTATCTAGGCACACTGACAACAGCACAATTAGGACACGCACACTCTCCCCTTGCCCTACCCTCGGCCGCTGTTCTAAATCGACAGACAACCCTTACCGTGCCCCCATTAGAGCCGATAACGAGTAGATCGGTAAGTGATATTTCGACGGTCATAACATCGACGACCGCTGCTCACACCGACCGATCGTGA
Protein Sequence
MRHAATEEAMKESLLKQEVKMEWEGRRPGDSSPQVPRTAEEQAGGSPQSVITTRRHVRTITTAGHITESIADAEPESPEPSPPSVKQPVHNNNNNNIKLLQPVIHQQQDSQQRQQQDQQHQDQPLEQAHRYQDNHHQHHQHQQQHYINISQGSSPEDQQRGVEPPQQHQVVYATTNGEDMQLEGQESSEGTITLAVKEQTRYGTPGTGERAEVERVFVYADDGGDARRPGHVITVQVHEHRRHHPQQHHHHHHHHQQPQQQQQQQQQQHQHGQQHQRFSPQENGHVTRYQVSPVVPAEDYEPSAMATSQAGTVQLGSPAPTYSPPVDGNRTTQHQLVATGYAESGNTTVKYEAIAAVPTDAIKPTGTYTTLETVALPSTQPVQYTQYVTDTFQHTSYTYAKPGDITYHAYPSSQPSSRSSEVESPAGVFIKSDPTLTSTSLLVPGRTAPLHYEPPNSPGSQVAIYGTATGPTFQFVKSTGDQYWHSGGSASPTTLEYVPAYSGMPAISTSDATNMLYSGGNYSVSGAGNGSPPTWPIQLPGADENFDGQIPNPQSKECVNCAASFTPLWRRDGTGHYLCNACGIYSRMNGANRPPVRSCGGKIKHTVAPSGRRTGVQCANCTTSNTTLWRRNNNGEPVCNACGLYFKLHNVNRPMSMKKEGIQTRKRKPKNHSGMGGGGMAGPSGIHKTEMKSNLLVDTKLPLNMFTSGGGNDGSEEQHYLGTLTTAQLGHAHSPLALPSAAVLNRQTTLTVPPLEPITSRSVSDISTVITSTTAAHTDRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01129733; iTF_00266124; iTF_00266854; iTF_01299676; iTF_01103942; iTF_01101746; iTF_01101005; iTF_01102453; iTF_01103225; iTF_00439881; iTF_00829154; iTF_00263945; iTF_00263021; iTF_00829905; iTF_00629487; iTF_01056463; iTF_01057308; iTF_01058037;
90% Identity
-
80% Identity
-