Nvir015194.1
Basic Information
- Insect
- Netelia virgata
- Gene Symbol
- grn
- Assembly
- GCA_951802705.1
- Location
- OX637867.1:16178169-16189108[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-17 1.7e-13 50.1 2.1 1 34 551 583 551 585 0.97 2 2 8.8e-18 2e-14 53.1 6.7 1 35 611 644 611 645 0.97
Sequence Information
- Coding Sequence
- ATGAGGCACGCAGCCACGGAGGAGGCGATAAAGGAGAGCCTGATGAAGCAGGAAGTGAAGATGGAGTGGGAGGGTCGTCGTCCGGGGGATAGTTCGCCTCAGGTACCACGAACGGCGGAGGAACAAGCAGGTGGTAGTCCGCAGAGTGTGATAACGACACGAAGACACGTGAGGACCATAACGACAGCCGGTCACATCACGGAATCGCTTGCCGACGGTGAGCCGGAGTCCCCGGAGCCCAGTCCAACGCCGATGAAACAATCGGGacataacaacaacaacaacaacaacaacaacaacaacaacaacaacaataacgatgaaaagttGTTGCAACCGGTGAACCATCAGGAGCAGCAACAGGATTCGCAATCGCGTCAACAGCAGGATCAACAGCAGGTTCAGCCTCAGGAACAGGCGTCTCGTTACCAGGATAGTCATCAAcatcaacagcaacagcagcattacataaatatatcgcAGGGTAGCAGTCCCGACGATCAACAACATAACGCTGTCGAGCAGACTCATCAGCATCAGGTCGTCTACTCGACCAGCAACGGCGAGGAGATGCAGCTCGAGAGTCAGGATTCCAGTGAAGGCACCATAGCCCTCGCGGTCAAGGAACAGCCCCGGTACGAGACACCAGGACCGGATGACAGAGCGGACGTGGAGCGAGTCTTCGTTTACGCGGAAGACGATGGTGACGTTAGAAGAGCGAGTCACGTCATAACCGTTCAAGTACACGAGCACAGACGTCATCACcctcagcagcagcagcagcagcagcagcagcagcatcatcAACAACACCATAGGTTTAGTCCGCAGGAAAATGGCCACGTCACGAGGTATCAGGATTCTCCGGTTGCCCCTGCAGAAGATTACGAGCCAACTGCGATGACGACATCACAGACGGGAACGGTCCAGCTTGGCTCACCCGCATCGACGTATTCACCACCGGTCGATGGAACAAGGACCACCCAACATCAGTTGGTAGCTACCGGATACGCGGAGAGTGGCAACTCTACGATCAAGTACGAGGCCGTCGCAGCTGTGCCTACGGACGCGATAAAACCAACTGGCACTTACACAACTTTGGAAACAGTTGCGTTACCGTCTTCCCAGCCTGTACAGTACACTCAGTATGTCACGGATACGTTTCAACACACGAGCTACACGTACTCGAAACCAGGAGAGATCACTTATCACGCTTATCCGAATAGTCACCCAGGCAGAGGATCCGAGGTGGAATCCCCAGCGGGAGTGTTCATCAAGAGTGACCCAACCCTAACATCAACATCGTTACTAGTTCCCGGTCGGACAGGACCGCTTCACTACGAGCAGCCTGGTTCTCCAGGTTCTCAGGTTGCGATTTACGGCACAGGTCCTACTTTCCAATTCGTAAAATCAACCGGTGACCAATATTGGCACCCGGGTGGATCAGCCTCACCGACGACGCTCGAGTACGTCCCGACGTATTCGGGTATGCCAGCGATATCAACCGGCGACGCCACCAACATGTTGTATTCCGGTGGGAATTACAGCGTGTCGGGTTCCGGAAACGGTTCGCCCTCGGGATGGCCGATTCAGCTTGCTCCTCCAGAGGAACCTTTCGAGGGGCAGATCCCAAATCCGGAGTCTAAGGAGTGCGTTAATTGTGCTGCTAGCTTTACGCCGCTATGGCGTCGCGATGGCACGGGACATTATCTGTGCAACGCTTGTGGCATTTACAGTCGAATGAACGGGGCCAACAGACCACCGGTCAGATCCTGCGGCGGGAAGATCAAGCACACCGTACCATCGTCTGGACGAAGGACGGGAGTGCAATGTGCCAATTGTAGAACGAGCAATACAACATTATGGCGAAGAAACAATAATGGCGAACCTGTATGCAACGCTTGTGGACTATACTTCAAACTTCACAACgTTAACAGGCCAATGAGCATGAAGAAGGAAGGAATccagacgagaaagagaaaaccgaAAAATCACTCCGGCATGGGTGGTGGAGGAATGGCTGGGCCAAGCGGAATGCACAAGaccgaaataaaatcgaatctaCTCGtGGATTCGAAGCTACCGTTGAACATGTTCACGAGCACCGGTGGTGGAAGTGACGGGAGCGAAGAACAACATTATCTAGGCACGCTGACAACAGCACAATTAGGACACGCGCACTCGCCCCTTGCGTTACCCTCGGCAGCCGTTCTTAATCGACAAACAACCCTTACCGTGCCCCCACTAGAGCCGATAACGAGCAGATCCGGGGCGGATCTAACAACGGTTATAACTTCGACGACGGCCGCCCACAGCGACCGATCGTGA
- Protein Sequence
- MRHAATEEAIKESLMKQEVKMEWEGRRPGDSSPQVPRTAEEQAGGSPQSVITTRRHVRTITTAGHITESLADGEPESPEPSPTPMKQSGHNNNNNNNNNNNNNNNNDEKLLQPVNHQEQQQDSQSRQQQDQQQVQPQEQASRYQDSHQHQQQQQHYINISQGSSPDDQQHNAVEQTHQHQVVYSTSNGEEMQLESQDSSEGTIALAVKEQPRYETPGPDDRADVERVFVYAEDDGDVRRASHVITVQVHEHRRHHPQQQQQQQQQQHHQQHHRFSPQENGHVTRYQDSPVAPAEDYEPTAMTTSQTGTVQLGSPASTYSPPVDGTRTTQHQLVATGYAESGNSTIKYEAVAAVPTDAIKPTGTYTTLETVALPSSQPVQYTQYVTDTFQHTSYTYSKPGEITYHAYPNSHPGRGSEVESPAGVFIKSDPTLTSTSLLVPGRTGPLHYEQPGSPGSQVAIYGTGPTFQFVKSTGDQYWHPGGSASPTTLEYVPTYSGMPAISTGDATNMLYSGGNYSVSGSGNGSPSGWPIQLAPPEEPFEGQIPNPESKECVNCAASFTPLWRRDGTGHYLCNACGIYSRMNGANRPPVRSCGGKIKHTVPSSGRRTGVQCANCRTSNTTLWRRNNNGEPVCNACGLYFKLHNVNRPMSMKKEGIQTRKRKPKNHSGMGGGGMAGPSGMHKTEIKSNLLVDSKLPLNMFTSTGGGSDGSEEQHYLGTLTTAQLGHAHSPLALPSAAVLNRQTTLTVPPLEPITSRSGADLTTVITSTTAAHSDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01306908;
- 90% Identity
- iTF_01056463; iTF_01057308;
- 80% Identity
- -