Rexs018302.1
Basic Information
- Insect
- Rhorus exstirpatorius
- Gene Symbol
- Hr39
- Assembly
- GCA_963564615.1
- Location
- OY751320.1:25681189-25692893[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.012 2.8e+02 1.1 9.4 61 165 236 335 216 347 0.69 2 4 1 2.4e+04 -11.5 20.4 84 160 367 457 339 482 0.47 3 4 1.7e-08 0.0004 20.3 0.0 1 21 561 581 561 586 0.91 4 4 1.2e-70 2.9e-66 225.0 0.0 201 408 741 947 606 947 0.89
Sequence Information
- Coding Sequence
- ATGTCGGAACAAAACGGGCCCACGGAGGGCCCGGGCTGGTGGCCACCGGCACAATCCTGGAAATCAACAACCGCCAATACATCATCGTCCTCGTCATCGATTCAATCCTCGCGTATCCTCGAGGcaggaaaaaatgtttccgtcACGACGATCAACGTGCCACCGGCTCAGGAGATGCACGatgGTAAAAGCGTTTGCAAGTACCTTGGAGGACAGAATGGCGTGACCGTGTCCGTGGTCTCGAGTTGCAGTAGCGGTCCAGGCAGTGTCATGGGCGCGGGATCGGTCGGAGGTGCGACGTCATCGACGTGCCCGGAAACGAGCTGTCACGATGATCTCGGGGACAGCGACGGTGAAGTTAGCAGGATCGATTTTCGCGGTGTTAATCTACGAACGAAGAAGAAACGCGATGCGCCGGATGGAACGGAGAACGAGTGCGGCGCTGTGGGATCTGAAAATCTCGAGCAACAGCAGCCCGAGAGACCGATGTCATGGGAGGGCGAGCTTTCCGATCAGGAAATGTCTTCGAATACGTTAACTAATCAGGATCACGAGGAGACATCGATGGAGGGCGTGCAGGTGTGCGGCGCTAGTCCCGGGCCGCAGGAGCAAAAATTTCCGATAAAACCAGAGCCGGATTTTCGCTCGAGTCCGAGTCTGCTGATCGGCTCGCACGACGGAACTTTGCCACTTTCCCACGTACAACAATTGCAACAGCATCAacaccaacaacaacaacaacaacaacagcaacaacaacaacaacagcagcgaGGTCTCGATGGGGCCGAGTCGGGCCAGCAGAGCGATCTACCGTTGCTCGTTGGAAAGCTCCTCGGTGGTTACAACAGCTCAACCCCAAATCACAGTCCGATATTGAATCCTCGTCATCATCTGACGAAGCAAAGTCACACGAGATCGCAGGTACCGTCACCGGATTCGGCGATACACTCGGCCTACAGTGTCTTCAGTTCCCCAACTCAGAGTCCCCACGCTGCTCGTCATTCGGCTCTTGGTCCCGGTAGCCCGGTGCCATCCTCATCTCTGTCACTCTCCCGTCACAGTTTCAATAATTCCACCTCGTCGCTGTCATTGTCACTCTCGCACTCGCTTTCGCGAAATAATTCCGACGCATCGAGCAGCTGTTACAGTTATGGCTCGCTGAGTCCACCGACGCATTCACCGGTTCAACAGCCCAGGCATTCTCATGcgcagcatcatcatcatcatcatcatcatcatcaacagcagcaacagcatCAGCATCAAcatcaacagcagcaacaacagcaacaacaacagcaggcCGGTAGTCCGTTGCATATTCCGTCATCGAATCCGACGAATCCTCAAAATTACGCGAGCCAAGGCACGGAAATAACGTCGGACGGTCAGCCGGATGATCAGGAGGATTGCAAAATTCCAGCAGCCTCGTCGGGAATATCGACGAGGCAACAATTGATTAACAGTCCTTGCCCGATCTGCGGCGACAAGATAAGCGGTTTTCATTATGGCATATTTTCCTGCGAATCCTGCAAGGGTTTCTTCAAGCGTACCGTACAGAATCGCAAAAATTACGTTTGCCTGCGTGGCGCCGGATGTCCCGTTACCGtggcaacgagaaaaaaatgccCGGCCTGCCGTTTCGACAAATGCCTCAACATGGGAATGAAACTCGAGGCCATAAGGGAGGATCGTACGCGCGGCGGTAGGAGCACTTATCAGTGCACTTATACACTTCCGGCAAATTTGCTCGGTGGCTCGAGCGGTGGAATTACCGGTGAACGAATCAGCGGTGGTAGCTGCGGCAGTCCAGCGCCACCTGGCACGGAGCATCATCATTCGGCGAGGCATCATTGGAATCATTCGCACAAGATACAGGCGGTGCCGCAATTGCTGCAGGATATCATGGACGTGGAGCATCTCTGGCATTACAATGACAATGATCGCGTTACCGGGCTCAATCGTAGCGTCAATGGCGGCGTTGGCAGTACCGGAAATGGTTCTTCATCGAGCTCCGGCGAGATCGATGGTTCGGGCTTTCGTGCTTCCGTTGCTGGCAGCGGAAGTGTCACGTGCGGTAGCAACAACAATGGCAATGTCGCGGAAAATCATTGTGAAAACGTGGGAACTGTCGATTCAACGTGTCGCCTCGTCGATAATGATAATCGAGGAGAAAATTCAACGTGCAACGATGCAACGAGCGTTGGAAATTCTTGCACGAATCCTAATGGCAATACGACGCAAAATCCTGATTTTCTGTCGAATCTTTGCAACATCGCGGATCATCGGTTGTACAAGATCGTAAAGTGGTGCAAGAGTTTGCCACTATTCAAGAATATCTCGATCGACGATCAGATATGCCTGCTCATTAATTCGTGGTGCGAATTGTTGCTTTTCTCGTGCTGCTTTCGCAGCATGAGCACACCCGGGGAGATCAGAGTTTCGCTCGGTAAATCTATTACCCTGGAGCAAGCGAGAGAACTGGGGCTCGCGACGTGTATCGAGAGAATGCTCGCTTTTACGAATAATCTGAGACGACTTCGGGTCGATCAGTACGAGTATGTGGCGATGAAgGTCATCGTTCTGCTGACGTCGGACACGAGCGAGCTCAAGGAGCCCGAGAAAGTCAGAGCCTCCCAGGAGAAAGCCCTTCAGGCTCTACAGCAGTACACGATCGCGAGGTATCCGGAGATGCCGGCGAAATTTGGCGAGCTTTTGCTACGAATACCGGATCTTCAGAGAACTTGCCAAGCCGGGAAAGAGCTGCTCAGCGCAAAGAGGGCCGAGGGCGAGGGCAGCTCTTTCAATCTTTTGATGGAATTACTCAGAGGAGATCATTGA
- Protein Sequence
- MSEQNGPTEGPGWWPPAQSWKSTTANTSSSSSSIQSSRILEAGKNVSVTTINVPPAQEMHDGKSVCKYLGGQNGVTVSVVSSCSSGPGSVMGAGSVGGATSSTCPETSCHDDLGDSDGEVSRIDFRGVNLRTKKKRDAPDGTENECGAVGSENLEQQQPERPMSWEGELSDQEMSSNTLTNQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFRSSPSLLIGSHDGTLPLSHVQQLQQHQHQQQQQQQQQQQQQQQRGLDGAESGQQSDLPLLVGKLLGGYNSSTPNHSPILNPRHHLTKQSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGPGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHAQHHHHHHHHHQQQQQHQHQHQQQQQQQQQQQAGSPLHIPSSNPTNPQNYASQGTEITSDGQPDDQEDCKIPAASSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLLGGSSGGITGERISGGSCGSPAPPGTEHHHSARHHWNHSHKIQAVPQLLQDIMDVEHLWHYNDNDRVTGLNRSVNGGVGSTGNGSSSSSGEIDGSGFRASVAGSGSVTCGSNNNGNVAENHCENVGTVDSTCRLVDNDNRGENSTCNDATSVGNSCTNPNGNTTQNPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARELGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00059522;
- 90% Identity
- iTF_01306568;
- 80% Identity
- iTF_01306568;