Rpad010381.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rhopalosiphum padi
Gene Symbol
FTZ-F1
Assembly
None
Location
scf7180000010743.466795:14316-42651[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.6e-18 7.5e-14 52.5 3.9 1 57 217 272 217 325 0.66
2 2 3.8e-70 3.4e-66 224.9 16.2 65 408 390 720 344 721 0.71

Sequence Information

Coding Sequence
ATGTTAGCAGCCGGCATGGATCACTCTGCCAGTTATCTGTCCCATTTCGGGCTCAGCCCGCCACAGGCGTCCGGCGACGATGGCGGTGACGATTCGCTGTACCAGCCGCCCGCCTCATCGCCGCCCCTGTACCAGTACATGCCGCCCCAGCACCAAACGCCCTCGTCCAGCGCGGCCGCCGCGTACTCGATGATGGGTGGCAGTAACCAGGGCTGTTATCAGCTGGGTAATGTGGATACAGCATATTTGTTCGGTTCTGCAGGTGGAAACGGTGGCGGAGGAGGAGGTGGCGGTGTGTCCGGTTCCATGGACGGCCTCCAGCAGTACGTGGCCGTCGGCGGAAACGGCGGCGGTACGCCCGTGTCCGCGGCCGCGGCCGCCGTCAACCCGTCGGCCACCGGTTCCGAGCTTCCTGACACCAAGGAAGGCATCGAGGAACTGTGTCCCGTGTGCGGTGACAAGGTGTCCGGTTACCATTACGGTCTACTCACGTGCGAGTCGTGCAAAGGCTTCTTCAAACGGACCGTGCAAAACAAAAAGGTGTACACGTGCGTGGCCGAGCGGTCGTGTCACATCGACAAGACCCAAAGGAAGCGGTGTCCGTTCTGCCGGTTCCAGAAATGTCTCGAAGTCGGCATGAAACTCGAAGCCGTCCGAGCGGACAGGATGCGAGGAGGCCGGAACAAATTCGGACCTATGTACAAACGGGACAGGGCGAGAAAGTTGCAGATGATGCGTCAGCGACAGATGGCCGTGCAGACGTTGCGCGGTGGCGTGGTCACGTCTGCCGGAGCCAACAGCCACCACCAATTCGCCATGTTGGCCGGCGACGCGGTCACGCTAGGCCAGTACCCCGGCTCCACCATCACGTCATCGGTGTCCAGTTTGCACATCAAACAAGAAATTCAAATTCCCCAGGTGTCTTCGTTGACGTCCTCACCCGACTCGTCACCCAGCCCGATCGCCGTGGCTCTGGGTCAGGCCGGACTCGGGTCTCTAGCCACTGGTGCTGGAGGCACCACGTGTGTGGTCAACCAACACTCGCAAATGACGCTGCAAATCGTGGCATCGGCCAACGGCAACAATAACAACAACACTAGTAGCAGCAACAACAACAACAGCACGGGCGTGACCAACATGACCGGTGCAAACGGTGGAGTGCCGCCGTCGCAACACCAGCAACATCACCAGCAGACACAGCAGCAACAACAACAACAGCAACAACAGCAACAGCAGTCGGCGGTCCCGGCCGCGTCCATGTTGTCCGTGAACAAAATGTGGTCGCCACCGTCGTCGCCTAAGAACTACCTGTTGTCCGCGCACCAGCAACAACAGCAACAGCAGCAACACCACGTGCCGCAGCAGCAACAACAGCAGCAACAGCAACAGCAGATGGTGGACGGCGGCGGTAGCACGTCGGCCGCTGCGGCTGCGACCGCCAACGGTGGCGGCGTCAAAGGCATGTCGCCCATGATCCGGGACTTTGTGCAGGGTCTGGACGACCGGGAGTGGCAGAGCTCGCTGTTCGGCCTGTTGCAGAACCAGACGTACAACCAGTGTGAGGTCGATCTGTTCGAACTCATGTGCAAGGTGCTCGACCAGAATCTATTCTCGCAGGTGGACTGGGCGCGGAATTCGGTGTTCTTCAAAGATTTGAAGGTGGACGACCAAATGAAATTGTTGCAGCACTCCTGGTCCGACATGCTGGTGCTGGATCACATCCATCATCACATGCATAACAACCTGGCCAACGAGATTATGTTGCACAATGGGCAAAAGTTCGATCTGCTCGCGCTCGGTCTGCTTGGCGTCACCACGATGGCCGACTGTTTCGCCCAGGTCATCGACAGGTTACAGGAGCTCAAGTTCGACGTCGGCGATTACATTTGCTTAAAGTTCCTGCTACTGTTGAACCCCGACGTTAAAGGGATCGGTAACAGTAAACACGTTCATGAAGGCCACGAGCAAGTGTTGAAGGCTCTGTTGGACTATTGCATCACAGCTAACTCTCAAGTACAGGACAAATTTACCAAGTTGTTGTCCGTGCTGCCCGAAATCCATCACATAGCCACCAGGGGCGAGGAGAGTCTGTACTTGAAGCACTGTAGCGGTGGCGCTCCCACGCAGACGTTGCTCATGGAGATGCTGCACGCCAAGCGAAAATAA
Protein Sequence
MLAAGMDHSASYLSHFGLSPPQASGDDGGDDSLYQPPASSPPLYQYMPPQHQTPSSSAAAAYSMMGGSNQGCYQLGNVDTAYLFGSAGGNGGGGGGGGVSGSMDGLQQYVAVGGNGGGTPVSAAAAAVNPSATGSELPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQMMRQRQMAVQTLRGGVVTSAGANSHHQFAMLAGDAVTLGQYPGSTITSSVSSLHIKQEIQIPQVSSLTSSPDSSPSPIAVALGQAGLGSLATGAGGTTCVVNQHSQMTLQIVASANGNNNNNTSSSNNNNSTGVTNMTGANGGVPPSQHQQHHQQTQQQQQQQQQQQQQSAVPAASMLSVNKMWSPPSSPKNYLLSAHQQQQQQQQHHVPQQQQQQQQQQQMVDGGGSTSAAAAATANGGGVKGMSPMIRDFVQGLDDREWQSSLFGLLQNQTYNQCEVDLFELMCKVLDQNLFSQVDWARNSVFFKDLKVDDQMKLLQHSWSDMLVLDHIHHHMHNNLANEIMLHNGQKFDLLALGLLGVTTMADCFAQVIDRLQELKFDVGDYICLKFLLLLNPDVKGIGNSKHVHEGHEQVLKALLDYCITANSQVQDKFTKLLSVLPEIHHIATRGEESLYLKHCSGGAPTQTLLMEMLHAKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01305739; iTF_00418314; iTF_00418376; iTF_00670258; iTF_00135481; iTF_00135353; iTF_01304223; iTF_01304285;
90% Identity
iTF_01328662;
80% Identity
iTF_01305739;