Rpad007336.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- -
- Assembly
- None
- Location
- scf7180000008406.501246:486556-491581[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-09 2.8e-06 27.9 0.0 3 41 19 58 17 62 0.93 2 2 2.5 4e+03 -1.5 0.0 31 46 93 108 91 108 0.81
Sequence Information
- Coding Sequence
- ATGACTTCTGCATTGTACTTACGAGTAAAACGGCCCGCGTACCAGTCGTCTAGTGTTTGGACAGAAACAGAAAAGCTCCAGCTAGCTGAAGCCATCGACATGTATGGTATATGTAACCCGGCTCGAATCGCTACGCGCGTGCCAACCAAAAAGCTCAAACAGGTGGAATACAAGTTGAGCCAACTTGGAATCGAATGCCGGAAAGAGGCTGAGTGCGCGGACATGAAGGTCATGCGGTTCGTCAACCTCAACGAAATGGATGACTTGTTCCTTGCTGGTGGCACCAAGCCCAAGGACGTGATGGTCAAGTGGATGGACTATCTGGAGACGTTCTACAACAAGGACCCGTGTCAGTTCGACAAGTTCAAACTATTTTCCAGCGCGTTTCTGATCATGTCAGAGTGTACGCCGCCGCCGGAGACGCCCCCAGATGCCTCAAACAACGTCATAGACTTCAGGAAAGTGTACTATTTCTTATATCGCGTCCTCAACAATTATTACGTAGGAAAAAACCACAAAGACACCAAAATATCGACATACTTGCACGAAATGTTCTTACGTGTGTTAGACGACATCGAGTACACGTCTGAAAACGAGAAAATCGCCATGTACAACATCGTATCCAATTGGACCAGTGTTAACAGGGAAAAGTCACTGAAAGTGTACGGGAAATCTGTTGAAACCGAAACTAAACAAGCGGAATCGGACACAAAATCAAATTTGAAGACGCCCGGATTTCAAGTGTTACAGCATCCAATGATCCCGAGCTTCAATCCACTCCAGATCCGGTCCAACACGCCGTTATAA
- Protein Sequence
- MTSALYLRVKRPAYQSSSVWTETEKLQLAEAIDMYGICNPARIATRVPTKKLKQVEYKLSQLGIECRKEAECADMKVMRFVNLNEMDDLFLAGGTKPKDVMVKWMDYLETFYNKDPCQFDKFKLFSSAFLIMSECTPPPETPPDASNNVIDFRKVYYFLYRVLNNYYVGKNHKDTKISTYLHEMFLRVLDDIEYTSENEKIAMYNIVSNWTSVNREKSLKVYGKSVETETKQAESDTKSNLKTPGFQVLQHPMIPSFNPLQIRSNTPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01304794;
- 90% Identity
- iTF_01328572;
- 80% Identity
- -