Rnym002851.1
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- -
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000005.1:9356465-9360204[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-09 1.4e-06 28.7 0.0 3 44 17 59 15 60 0.95 2 2 3.7 3.9e+03 -1.4 0.0 31 46 91 106 89 106 0.81
Sequence Information
- Coding Sequence
- ATGTCTATTAATATCAGCGGGCTTAAGTCCGCGTACCAGTCGTCTAATGTTTGGACAGAAACAGAAAAGCTCCAGCTGGCTGAAGCCATCGACATGTATGGTATAGGTAACCCAGCTCGAATCGTTACGCGTGTGCCCACCAAAAAGCTCAAACAGGTGGAGTACAAATTGCAACAACTCGGAATCGAATGCCGGAAAGAGGCTGAGTGCGCGGACATGAAGGTCATGCGGTTCGTCAACCTCAACGAAATGGATGACTTATTCCTTGCTGGCGGTACCAAGCCCAAGGACGTGATGGTCAAGTGGATGGACTACCTGGAGACGTTCTACAACAAGGACCCGTGTCAGTTCGACAAGTTCAAACTGTTTTCCAGTGCGTTTCTGATCATGTCAGAGTGTACGCCACCGCCTGAGACGCCCCCAGATGCCTCAAATAACGTCATAGACTTCAGGAAagtgtactatttcttatatCGCGTCCTCAACAATTATTACGTAGGAAAAAACCATAAAGACACCAAAATATCGACCTACCTGCACGAAATGTTCTTGCGTGTGTTAGACGACATCGAGTACACGTCCGATAACGAGAAAATCGCCATGTACAACATCGTATCCAATTGGACCAGTGTTAACAGGGAAAAGTCACTGAAAGTGTACGGGAAATCTGTTGAAACCGAAACTAAACAAGCGGAATCGGACACCAAATCAAATTTGAAGACGCCCGGATTCCAAGTGTTACAGCATCCAATGATCCCGAGTTTCAATCCACTTCACATTCGGTCTAACACgccgttataa
- Protein Sequence
- MSINISGLKSAYQSSNVWTETEKLQLAEAIDMYGIGNPARIVTRVPTKKLKQVEYKLQQLGIECRKEAECADMKVMRFVNLNEMDDLFLAGGTKPKDVMVKWMDYLETFYNKDPCQFDKFKLFSSAFLIMSECTPPPETPPDASNNVIDFRKVYYFLYRVLNNYYVGKNHKDTKISTYLHEMFLRVLDDIEYTSDNEKIAMYNIVSNWTSVNREKSLKVYGKSVETETKQAESDTKSNLKTPGFQVLQHPMIPSFNPLHIRSNTPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01305491; iTF_01167548; iTF_01328572; iTF_01037711; iTF_00940415; iTF_00972988;
- 90% Identity
- iTF_01328572;
- 80% Identity
- -