Rpad015339.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- arid3a
- Assembly
- None
- Location
- scf7180000007978.870103:475314-544122[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-26 1e-22 80.8 0.0 2 89 175 260 174 260 0.96 2 2 1.1 3.5e+03 -1.0 1.1 67 86 331 351 315 352 0.64
Sequence Information
- Coding Sequence
- ATGAAAATGACAATGGATGCCACAGATAGTGCAAGACTTGGCTTAAACTTGAATTTGAGCGTACAACCTCAATCATATCATTGGATTCAATCACCTAAAGGTACTGATGACGAGGATGAAGATGACCGTAGAAGAGTGGATGACGATTGTTCACCGGAAGAAGAACCGGATATCCTGGAAATGCAGAGAGAAGAACGTGAAACCCTTAATCAGTTGGCTCGTCGTTTGGCAAGTGGATCACATGGATTGATGGGAAGTCACACTGCGTCTATGTTACAACATTTTGCTTACCGTCATCCTAATGGGATGCCTATGTCTGATCAGATTGTCATGCCAATACCTTCTAGACGGCCGGCCAATATAGAATCACCACCAGGATCCAGTCGATCAGGTGACACACCTCTTGGTCATGAATATACGCCGGAAAACGAGTCGTCTCTGTTGGCCAGAAAGGGTGAAGCACAATCGTGGACTTTTGAAGAACAGTTTAGACAGCTATATACTGCGGGCAACGAGACGGACAGACGCAGTTTCCTGGATTCACTGTTTAGTTACATGCAGGAACAAGGGACTCCGATAAGCCGACTACCCATCATGGCCAAACGTGTGTTGGACCTGTACACGCTGTACAAACTAGTCGTACAAAGAGGAGGAATTGTGGCGGTCATCACTAAAAAATTGTGGCAAGAGATAATTCGAGGCTTGGGCTTACCGCCGTCCATCACTAGCGCGGCTTTCACGTTGAGAACTCAATATGTCAAGTACCTGTACGCGTACGAGTCGAAAATGAATCAGTTCAGCTCGGTGGACGAACTGAACATGGCCATAGCCGGAAACCGGCGCGAGGGCCGCCGGAACAAGTCTCTGATGTCCGAGTACATGCCCGCGCTCCCAGCGACCACGGTGGCCGGCCACCTGCATCACCACGGCCAACTGTCGTCGGCGGCACACGGCCAACACCACAATCACCAGCAACAGCAGCATCATCACCAGCAACAACAGCACCATCACCAGCAGCAGCAACAGCAACAGCACTACGCCAACGTGCTAGCCGCCGACGATCGGTTCCGCCACTTGGCCGCCGCCATCATAGACAACAACAGACACCGCGCCGCCACGGAACAGGGCAGACAGCAGCCGCCGCCGTCGTCGTCGTCGTCGTCGCCGCGGCCCGGCAGTCCGATGCAACGACTGTCCCAGCTGCAGCCGCCGCCGCCGTCCGCCGTCGCCGAGGCGTCGCCGTTGTTCAACGGCCACCAGCTACAATTGCCGCCGTACCAATCGGCCACGATGATGGCCGCCGCAGCGCATCAGGTAGCGGCCGCCGGCGACCACAGCAGCAAGCAGAGAGAAATTCTCAGTATGTTAATGTGGATGGACTTAATGAGAAATCAAACAGCAGCTATTCCAAGACTTTCAATACAAAACTTGCAACAGTCATGCAGCCCGTCACCATACGCCACCGTACCGGCCGCGATGAATCTACAACGTCAGTCTCCGGTCGCGTTGCGTTCAAATAACGGACCGGAACAGTGCGAGGCGTTGAATTTGGGTAAAAAAGATCAAGGGACGAACAACAATAACGCAGGTGAAAACGAGGACGAACCGGATCAAAAACGCATCAAGAAGGAACGGTCGCCCCGGGTTATCGTGGCTAGTCGTCCCGGCAGTCCCAAGATGACGAGCCCTGAACGATTTCCGGCGCCAACCATAAATAGTCCGATACGGGAGTCATCTACATCGCCTGAACGGAATGGTGACGACAAAGCGGCGGACTGCAGCAACGGTACAATCGAAATGGACATCAGCGTGTCGGCCGGTGCGCCTAGCGGTCTCAAAATAAACGTTTGTAAAAGAACAAAAAATGGAATTTACAAAGGTCAACTTGTCAAAGTTGAATCAGAATTAAATGGAGGAACGAAGAACACTAGACCCTTTATTTTGCGCCTCAATGGTGAACTCTACACAGGATGCCTACAACAACAAAGCAGTCTTGATAATCACGATGACCAACATTCTAGTTAA
- Protein Sequence
- MKMTMDATDSARLGLNLNLSVQPQSYHWIQSPKGTDDEDEDDRRRVDDDCSPEEEPDILEMQREERETLNQLARRLASGSHGLMGSHTASMLQHFAYRHPNGMPMSDQIVMPIPSRRPANIESPPGSSRSGDTPLGHEYTPENESSLLARKGEAQSWTFEEQFRQLYTAGNETDRRSFLDSLFSYMQEQGTPISRLPIMAKRVLDLYTLYKLVVQRGGIVAVITKKLWQEIIRGLGLPPSITSAAFTLRTQYVKYLYAYESKMNQFSSVDELNMAIAGNRREGRRNKSLMSEYMPALPATTVAGHLHHHGQLSSAAHGQHHNHQQQQHHHQQQQHHHQQQQQQQHYANVLAADDRFRHLAAAIIDNNRHRAATEQGRQQPPPSSSSSSPRPGSPMQRLSQLQPPPPSAVAEASPLFNGHQLQLPPYQSATMMAAAAHQVAAAGDHSSKQREILSMLMWMDLMRNQTAAIPRLSIQNLQQSCSPSPYATVPAAMNLQRQSPVALRSNNGPEQCEALNLGKKDQGTNNNNAGENEDEPDQKRIKKERSPRVIVASRPGSPKMTSPERFPAPTINSPIRESSTSPERNGDDKAADCSNGTIEMDISVSAGAPSGLKINVCKRTKNGIYKGQLVKVESELNGGTKNTRPFILRLNGELYTGCLQQQSSLDNHDDQHSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167383;
- 90% Identity
- iTF_00972832;
- 80% Identity
- -