Rpad024955.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- dl
- Assembly
- None
- Location
- scf7180000007829.2181440:238896-241741[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-75 6.9e-71 238.2 0.1 1 169 51 220 51 220 0.99
Sequence Information
- Coding Sequence
- ATGGATCTGAATGATAATCAATCTAATATCCCCGATCTCCATCTTAGTGATGTCATCGAGGTCATTGAAGAGCACGTAAGAACTGACACTGTGCAACAAATGGACGGTCCATCATCAAATAATGGGCGAAGACCAATAGCTACACCATATATCAAAATAGTTGAACAGCCTGCATCAAAAGCTTTGAGGTTTAGATATGAGTGTGAAGGTAGATCAGCTGGAAGTATACCCGGAGTTAATAGCACTACTGAAAATAAAACCTACCCAACAATTCAAATAGTGGGGTATAAAGGGAGAGCAGTTGTTGTTGTATCCTGTGTCACAAAAGACAGACCATTTCGACCTCATCCTCATAACCTTGTAGGACGTGACAACTGTAAAAGAGGAATTTGTACTATTGAAATCAATAATGAATCAATGACAGCAAGTTTTCAAAACTTAGGAATACAATGTGTAAAAAGAAAAGATATAGATGAGGCTCTCAAAGTACGAGAAGAAATAAGAGTAGATCCATTTAGGACTGGATTTTCACATAAAGATAACCCAACTTCAATTGACTTAAATGCAGTAAGGTTATGTTTTCAAGCATTTCTAGGTGGTACACAAAAAGGAAAATATAGTATCCTTGAACCAATTGTATCAGATCCTATTTATGATAAAAAAGCGATGTCGGATTTAGTGATATGTAGATTAAGTGATGCAGCAGCTTCAGTTGTAGGTGGTAGAGAAATCATATTATTATGTGAAAAAGTTACAAAAGATGATATCCAAGTAAGATTCTTTGAGGAAAAAGATGGTGTATGTACTTGGGAAGGTTATGCTGATTTTCAACCTTCAGATGTACATAAACAAGTGGCTATTAGTTTTAGGACTCCGAAGTATAAAGTAATGCAGATTGATGGTCCAATAAATGTATGGATTCAGTTAAAACGACCTACAGATGGCATGTGTAGTGAAGCTCGTCCATTTTTGTTCACTCCGGTTGATTCAGGTATGTCCCCCCAGAAATATGATAGGCTACCAGAAAAAAGTTTCAATGACTATTGGGCAGATGATCAACCAGAAGAAAAAGTACCGCTTAGTGTTTTTGATAAAAATAAAGATACTGAGGATGAAGATATTAAAGTGGAAATAAAAGATGAACCTATGGAGGTCAATGAGGATATATGTTATGACATTAATAAAGAGAATAAAGAAGATTCAATTAGTTCTTCTTCAGAGGTTATGGGTGAAGATTTGCGTGGAACTTACTCTAGTCTTCAAATGGCATTTAAAAATCCATGTTCCATACCTGAAAGATGTCAGAGTTACGAAGATGTATCAATTTTACCACCTAGACCTCCTAGCAGTTCTAAACCAAAGTTTGACAATAATACTGCACCACCGTTGCCACCAAAAAGAGTTAAAAAAAATCCTAGACCAACAAAATATCTTCCTACAGTACAAGAAAAACCATCAAAAATCAAACTGTTGCATAAATTATTGAGTATGCGGAAAAGAAGTAAATCAATGTGTTCATCGAATAGTAGTATCAATGAACCTATTAATGATACTCCTTTGACAGAAGCAGAAAATTATGCCTTATATACTTCTGTAGCACCTCATGCAGCCATGTCGGAGTTTGATGAATCGTCTATGTATTATAGTACTGTTGAAGGGGGCACAGTTACAACTGTAAAATAA
- Protein Sequence
- MDLNDNQSNIPDLHLSDVIEVIEEHVRTDTVQQMDGPSSNNGRRPIATPYIKIVEQPASKALRFRYECEGRSAGSIPGVNSTTENKTYPTIQIVGYKGRAVVVVSCVTKDRPFRPHPHNLVGRDNCKRGICTIEINNESMTASFQNLGIQCVKRKDIDEALKVREEIRVDPFRTGFSHKDNPTSIDLNAVRLCFQAFLGGTQKGKYSILEPIVSDPIYDKKAMSDLVICRLSDAAASVVGGREIILLCEKVTKDDIQVRFFEEKDGVCTWEGYADFQPSDVHKQVAISFRTPKYKVMQIDGPINVWIQLKRPTDGMCSEARPFLFTPVDSGMSPQKYDRLPEKSFNDYWADDQPEEKVPLSVFDKNKDTEDEDIKVEIKDEPMEVNEDICYDINKENKEDSISSSSEVMGEDLRGTYSSLQMAFKNPCSIPERCQSYEDVSILPPRPPSSSKPKFDNNTAPPLPPKRVKKNPRPTKYLPTVQEKPSKIKLLHKLLSMRKRSKSMCSSNSSINEPINDTPLTEAENYALYTSVAPHAAMSEFDESSMYYSTVEGGTVTTVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01432808;
- 90% Identity
- iTF_01031728;
- 80% Identity
- -