Rpad020249.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- -
- Assembly
- None
- Location
- scf7180000008430.691952:311991-315497[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-10 1.3e-06 28.8 10.4 2 63 362 423 361 425 0.96
Sequence Information
- Coding Sequence
- ATGCGACAAACGGTCGTGTCGACAACCGCGGTGAGCACCTCGTTCCCGCGAAATTCCTCTGCGCTGTCGTCGATACGCCGGAGCACGAACCCGCGCCCGATCACTCACAAACCTGAAACCACAGTACTTTGCCGACCGACCGCTTGTAGTTGTCCCATCGACTTTCGTCACTCCGTCAATTTTTCATACCCACGTTGGACGAGAGAAATCGCCTATCGCAAACGCCAAACGGTCTTCCGAAGAAATTTCAGTGGTGTACCACAACGACGTACCACCATTACTTTTGTAAGCACCAAAGCGAATCCAAAAACCAAGCCATCATGTTCTACTGCATCCAAAACTGTGTTATCTTCATGTCCTGCCGAGAAAACCGGCACCCCAAACGTGAACATTCAATTGCTCCAGCCATTAACACATCAAACGGTCTTGGAGACCAGTTCAAGTTCACTAATGTACGATGCACCCACCAAAATGGAGGGCTTAGTGGATGAATTTTTAAATATGTGTGCAAACGAAAAAAATAAATGCGATAGACAAGCACCCGGGATTATAAATTCAAGTAACAGCACTAATGACATAACTATGTACAGAGAAGACGAGCCGTATTTAGACATGTTTCAAATGGATGCGCCTGCTTTATTGGAGCCATTCTCAACACCTCAAAATGTTTTCACAATCGATGACGAATTTCAAAAGATAAACAAACCAGAGATAGAACTTATTATACCTTTAGAAGATGCAGCTTTTAAACAACCAATATCTATGAGAAAAAACTCTACCCTCAAATTAGATGTTGGGCTACAACAAATTCAGTCTACTAGTTACGGTGACATTTTAAACACACCAGAAGTTGTAAAAACGCTGACTGAACAAGAATCTGCTTTTAATCTTTTAGCTTATGTTTTTGATGAAAAAAAAACTGACAATTTGGCTGAAGTACCTACACCCAAAGATGTAACAACTGTATCACCAACCTCTCAGTGGACTCGAAAACGACGTAGTAGTAATTCATCAGCTTCAATACAGACAGACGATGATGACTATCCTAAGCACAGAAAGCCTAATGAAGATTACCATTCATCTGATGACAAGTATCGACAATTGAGGGATCGCAATAACGAAGCATCTCGTAAGTCTAGAGCTACAAGAAAAGCCAGAGAAAATGAGTTAAATGGCAGTGCTAGTCAATTGGAAGCCACCAACAGAAGGTTGGCTATCAAAGCTGAAGAACTGGAGAAAATGGTCAACGATATGAGACAAGCTTTATTAAAAATTATGACGAAGAAAAAATAA
- Protein Sequence
- MRQTVVSTTAVSTSFPRNSSALSSIRRSTNPRPITHKPETTVLCRPTACSCPIDFRHSVNFSYPRWTREIAYRKRQTVFRRNFSGVPQRRTTITFVSTKANPKTKPSCSTASKTVLSSCPAEKTGTPNVNIQLLQPLTHQTVLETSSSSLMYDAPTKMEGLVDEFLNMCANEKNKCDRQAPGIINSSNSTNDITMYREDEPYLDMFQMDAPALLEPFSTPQNVFTIDDEFQKINKPEIELIIPLEDAAFKQPISMRKNSTLKLDVGLQQIQSTSYGDILNTPEVVKTLTEQESAFNLLAYVFDEKKTDNLAEVPTPKDVTTVSPTSQWTRKRRSSNSSASIQTDDDDYPKHRKPNEDYHSSDDKYRQLRDRNNEASRKSRATRKARENELNGSASQLEATNRRLAIKAEELEKMVNDMRQALLKIMTKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01304613;
- 90% Identity
- iTF_00135069;
- 80% Identity
- -