Rnym016787.1
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- -
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000022.1:471675-475725[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-10 9.3e-07 29.2 10.4 2 63 278 339 277 341 0.96
Sequence Information
- Coding Sequence
- ATGGCATTTCGCGACTTTAGCACCATTACTTTTGTAAGCACCAAAGCGAATCCAAAAACCAAGCCATCATGTTCTACTGCATCCAAAACTGTGTTATCTTCATGTCCTGCCGAGAAAACCGGCACCCCAAACGTGAACATTCAATTGCTCCAGCCATTAACACATCAAACGGTCTTGGAGACCAGTTCAAGTTCACTAATGTACGATGCACCCACCAAAATGGAGGGCTTAGTggatgaatttttaaatatgtgtgCAAACGaaaaaaataaatgcgaTAGACAAGCACCCGGgattataaattcaagtaaCAGCACTAATGACATAACTATGTACAGAGAAGACGAGCCGTATTTAGACATGTTTCAAATGGATGCGCCTGCTTTGTTGGCACCATTCTCAACACCTCAAAATGTTTTCACAATCGATGACGAATTTCAAAAGATAAACAAACCAGAGATAGAACTAATTATTCCTTTAGAAGATGCAGCTTTTAAACAACCAATATCTATGAGAAAAAACTCTACCCTCAAATTAGATGTTGGGCTACAACAAATTCAGTCAACTAGTTACGGTGACATTTTAAACACACCTGAAGTTGTAAAAACGCTGACTGAACAAGAATCTGCTTTTAATCTTTTAGCTTATGTTTTTGATgaaaaaaaaactgacAATTTGGCTGAAGTACCTACACCTAAAGATGTAACAACTGTATCACCAACCTCTCAGTGGACTCGAAAACGACGTAGTAGTAATTCATCAGCTTCAATACAGACAGACGATGATGACTATCCTAAGCACAGAAAGCCTAATGAAGATTACCATTCGTCTGATGACAAGTATCGACAATTGAGGGATCGTAATAACGAAGCATCTCGTAAGTCTAGAGCTACAAGAAAAGCCAGAGAAAATGAGTTAAATGGCAGTGCTAGTCAATTGGAAGCCACCAATAGGAGATTGGCTATCAAAGCTGAAGAACTGGAGAAAATGGTCAACGATATGAGACAagctttattaaaaattatgacaaagaaaaaataa
- Protein Sequence
- MAFRDFSTITFVSTKANPKTKPSCSTASKTVLSSCPAEKTGTPNVNIQLLQPLTHQTVLETSSSSLMYDAPTKMEGLVDEFLNMCANEKNKCDRQAPGIINSSNSTNDITMYREDEPYLDMFQMDAPALLAPFSTPQNVFTIDDEFQKINKPEIELIIPLEDAAFKQPISMRKNSTLKLDVGLQQIQSTSYGDILNTPEVVKTLTEQESAFNLLAYVFDEKKTDNLAEVPTPKDVTTVSPTSQWTRKRRSSNSSASIQTDDDDYPKHRKPNEDYHSSDDKYRQLRDRNNEASRKSRATRKARENELNGSASQLEATNRRLAIKAEELEKMVNDMRQALLKIMTKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01305299; iTF_00135069; iTF_00940131; iTF_01031715; iTF_01032641; iTF_00184359; iTF_00463119; iTF_00018770; iTF_01303944; iTF_01303943; iTF_00972809; iTF_00135915; iTF_00133995; iTF_00340336; iTF_01346842; iTF_01432788; iTF_01169613; iTF_01499407; iTF_00308595; iTF_01330331; iTF_00468726; iTF_00468725;
- 90% Identity
- iTF_00135069;
- 80% Identity
- -