Rnym018134.1
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- ANKFY1
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000025.1:5615382-5623863[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00045 0.17 12.5 0.0 4 35 71 101 68 103 0.88 2 3 4.7e-07 0.00018 22.1 0.0 62 107 122 169 107 172 0.90 3 3 3.4 1.3e+03 0.0 0.0 80 107 174 201 169 203 0.83
Sequence Information
- Coding Sequence
- ATGCCAGCCGCCGAACTGTACAGAGAAGGAACGTCTGGAGACTCCGAAAAGcataaacaacaacaacatcTTTCATTGTTGAAAGATGAATATGTCAAACTCCAAGCTTATTGCAatgaattggaaaaaaaacatGCCGCATTGGCAGCAACATATGGCGATTGTAATGACAAAAGTTTTGTCTCCAGGCTTTTGAAAACAGTAACAACATTGTATAACAACACACTTTACAGtgatttaaatataacactgGCAAATGGCGATGTTCCAGCTCATAAGTTTGTATTATCATCGAGAAGTGATAAATGGGGAGTTCCTGACTTAACTGAAGTTATTTACTTAgATTGGACCGCGTTACCCTTAGATGTTGGCAAAGCATTACTAAAATGGATTTACACAGATCAAGTAGATTTCTCTAAAGGTGATGGTTTCATTTTAAGCCTAATGAAAACAGCAGATACGTTTGTTTTAGATGATTTAGTtaataaATGTGAAAAAGCACTTATGGCCTCTGTAAATGTAAAGAACTGTGTAAAGTTTTATACCACTGCTGATGAAATTGGAGCTCATACATTAAAAGAACATTGTTCAAGTTTAATATCAGCTCATTGGgatGATTTTACTAGTGATGATTTTGCACATATGTCAGCACAATTTTTATACCACATGTTTAAGAGCAAGACCAAATATCCTCTTCACTCAGCTGTTAGGCTTAAAAGAGAAGATGTTGTATTCTTATACGTAGTTGAGCATAGTTCCcagAAACCTCATAATGTTGTAAATGATGATCACGGCAATCGTATCCGTGTGACTGGAAAAGTTCGTCGTCTGTTTGGCGTTGTTGCAAAGGTTATCGTTGCAGTAGCAGAACTGCGTTTCCGCTGTCCTCAGTTGGTCATCGTTACCAGAATAGCATCCTTTTTTGAACGAATCGTACTCGATGGCTGA
- Protein Sequence
- MPAAELYREGTSGDSEKHKQQQHLSLLKDEYVKLQAYCNELEKKHAALAATYGDCNDKSFVSRLLKTVTTLYNNTLYSDLNITLANGDVPAHKFVLSSRSDKWGVPDLTEVIYLDWTALPLDVGKALLKWIYTDQVDFSKGDGFILSLMKTADTFVLDDLVNKCEKALMASVNVKNCVKFYTTADEIGAHTLKEHCSSLISAHWDDFTSDDFAHMSAQFLYHMFKSKTKYPLHSAVRLKREDVVFLYVVEHSSQKPHNVVNDDHGNRIRVTGKVRRLFGVVAKVIVAVAELRFRCPQLVIVTRIASFFERIVLDG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167813; iTF_01170024; iTF_00308973; iTF_01499796; iTF_01330743; iTF_00469080; iTF_00670392; iTF_01434202; iTF_01032292;
- 90% Identity
- iTF_00941819;
- 80% Identity
- -