Rnym016127.1
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- KIWI
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000020.1:183628-184686[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.092 2.3e+03 -1.4 0.6 31 38 29 36 27 38 0.86 2 2 7.5e-29 1.9e-24 85.4 0.4 1 51 50 100 50 101 0.97
Sequence Information
- Coding Sequence
- ATGGCACCAAAGAAGTCTAAACGTAGTGCTTCAGATGACTCTTCCTCCGACTCTGGACCCGACGAcAGAAATCCTCCTCCAAAGAAATCTAAACCTACTGATAAAGGAAGTTCCAAGAAAACCAACTCAAATGAAGAAGAGCATTCATTTGCACTGGATAAAAATCGCTTTGTTAAAGTTAGAGAATTCCGTGGTAAACTTTTCATCGACATCCGCGAATTTTATGAGAAGAACGGAGAAACACTTCCTGGAAAAAAAGGCATATCTTTGTCTGTTAGCCAATGGAACAGACTGAAAGAGCAAATTGATGATATTCAAGAGTCTGTGGAAAAACTGGGATAA
- Protein Sequence
- MAPKKSKRSASDDSSSDSGPDDRNPPPKKSKPTDKGSSKKTNSNEEEHSFALDKNRFVKVREFRGKLFIDIREFYEKNGETLPGKKGISLSVSQWNRLKEQIDDIQESVEKLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00468944;
- 90% Identity
- iTF_00940517; iTF_01032901; iTF_01328645; iTF_00019046; iTF_01167624; iTF_01304202; iTF_01031981; iTF_01037807; iTF_00973055; iTF_01305567;
- 80% Identity
- iTF_01304202;