Rnym020793.2
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- -
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000035.1:2878855-2880019[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-08 6.9e-05 23.4 0.7 3 45 6 64 4 65 0.83
Sequence Information
- Coding Sequence
- ATGTcgaataaattttcattttcccCATCAGAGGACGAAGCCTTGATTGGCTTGGTGGAAAACAATACAGTTATTTTTGATAGtggtcataaaaaatataaagatatttactttaaagataatatttggaaaaatatatcCCAAGATGTAGGAAGATCAAGCGATGACTGTAAAAAACGCTGGAGAAATATTCGTGATACGTATATGAAGCAGAAAAAGAAACTTCCGACCGGATCAGAAActccacataaaaaaaaaggatgTACAATGaatttgtcatttttaaaCACCGTTGAATACGAAAGAAGcaCTATAACAAATATGGACATAACTGGTGCCAATACGTCAAATGCAGCTACTACACACGAAATTGAACATGAAGACGAGGAAGACGTACAAAATGATGAAgaacaaactaaaaatatcatgTCCGATTTGCCATCAAGTTCATATGCAGGGAAGCGCATTCGGTCAAAAGAAGACAAGATTTCTGCTATTTTGGCCAAACGCTCAAAGGATACGAAGGACACCATACTTAGAATACAAGAACAAAATAAACTGTTGGCTAAAAACCTGTGTGAAGAGGATgatattgacatattttataaaagtattgcaATGACGGTTAAAAAAATGCCACCACAAGCGATCAAAGAAGCCAAACTCAAGACACTTACGTTGATAACTGAAATTGATGACAAATATTCAACTCGTCAAACACTACCTTATCAAATACCGTCagattataacaatatgtacCAATGTCAACCGAGTTCACCGGCCAATTCTTTCAGTACCTCAACATCGTCACAAGGGTTTTTGCCGTTCAATTATGGTGACGAATCTAATGCTTAa
- Protein Sequence
- MSNKFSFSPSEDEALIGLVENNTVIFDSGHKKYKDIYFKDNIWKNISQDVGRSSDDCKKRWRNIRDTYMKQKKKLPTGSETPHKKKGCTMNLSFLNTVEYERSTITNMDITGANTSNAATTHEIEHEDEEDVQNDEEQTKNIMSDLPSSSYAGKRIRSKEDKISAILAKRSKDTKDTILRIQEQNKLLAKNLCEEDDIDIFYKSIAMTVKKMPPQAIKEAKLKTLTLITEIDDKYSTRQTLPYQIPSDYNNMYQCQPSSPANSFSTSTSSQGFLPFNYGDESNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01304797;
- 90% Identity
- iTF_01433057;
- 80% Identity
- -