Rnym014741.1
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- -
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000017.1:3371656-3372805[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-08 2.6e-05 24.7 1.0 3 45 6 64 4 65 0.83
Sequence Information
- Coding Sequence
- ATGTcgaataaattttcattttcccCATCAGAGGACGAAGCCTTGATTGGCTTGGTGGAAAACAATACAGTTATTTTTGATAGtggtcataaaaaatataaagatatttactttaaagataatatttggaaaaatatatcCCAAGAAGTAGGAAGATCAAGCGATGACTGTAAAAAACGCTGGAGAAATATTCGTGATACGTATATGAAGCAGAAAAAGAAACTTCCGACCGGATCAGAAACTCCACATAAAGAAAAAGGATGTACAATGAATTTGTCATTTTTGAACACTGTTGAATACGAAAGAAGcaCTATAACAAATATGGACATAACTGGTGCCAATACGTCAAATGCAACTACTACACACGAAATTGAACATGAAGACGAGGAAGACGTACAAAATGATGAAGAACAAACTCAAAATATCATGTCCGATTTGCCATCAAGTTCATATGCAGGGAAGCGCATTCGGTCAAAAGAAGACAAGATTTCTGCTATTTTGGCCAAACGCTCAAAGGATACGAAGGACACCATACTTAGAATACAAGAACAAAATAAACTGTTGGCTAAAAACCTGTGTGAAGAGGATgatattgacatattttataaaactattgcaATGACGGTTAAAAAAATGCCACCCACAAGCGATCAAAGAAGCCAAACTCAAGACACTTACTACCTCAACATCGTCACAAGGGTTTTTACCGTTCAATTATGGTGA
- Protein Sequence
- MSNKFSFSPSEDEALIGLVENNTVIFDSGHKKYKDIYFKDNIWKNISQEVGRSSDDCKKRWRNIRDTYMKQKKKLPTGSETPHKEKGCTMNLSFLNTVEYERSTITNMDITGANTSNATTTHEIEHEDEEDVQNDEEQTQNIMSDLPSSSYAGKRIRSKEDKISAILAKRSKDTKDTILRIQEQNKLLAKNLCEEDDIDIFYKTIAMTVKKMPPTSDQRSQTQDTYYLNIVTRVFTVQLW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01433057; iTF_01304800;
- 90% Identity
- -
- 80% Identity
- -