Rnym018697.2
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- osa
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000026.1:6617907-6628868[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-25 4.6e-22 78.7 0.0 2 89 569 656 568 656 0.91
Sequence Information
- Coding Sequence
- ATGTGTCGGAGAATAGCGTGTTACCTCCACCCTTTTGCCGCGGTCCTTGTTCTCAGTCATTCTCTCTCACCCTTCTCTTTACCACCAGTCGTCGTAAAGGATTTGACAAGTCAAAACAGTAACGATAGCAATTGTGGTGCTGGTGCTGGCAATGGTGGGACTCCTCTACGGCCGTCGCCGTCTCCTACAGGATCTACTGGTTCGCGTTCCATGTCGCCTGCTGTCACTGCACCACCGGGTGGTGGACCGCCtcaacaacaacagcaacagAACATTCCAATGCCGCCTAGGCCACCAAGCAGTCAACAGCAGCCTGATCCAGGGCAAGCTACTCAAAATAATAGAATGAGCCATTCGCCTATGGGGCCACAACAAGGATATCAACAACAACCATCCCCACAACCTCCAGGTGGAATGCCTCATATGACAGGTCCTTCATCCGGAGCACCAGTACAAAATCCGTACAAAATGCCTGGACCGAATCCTTATGGTCCTCCTCCACCTGTATCTTCACATAGTGGTTATCCTTCACAACAACAGCCTGCTCCACCTATGGGATCATACCCTCAACAACCTCCTGGTAATTACGGTGCTAGACCTCCTGGTATACCTTATCAAGGGTATCCACCACCTAATAGTAATGGTCCTCCACAACAATACTCTCCTAGAGGTATGCCGATGCATCATGGACCCCCTCATCAATTTCCTCCTTACCAAGGATGGCCTGGTAGTGGTCCACCACAAGCACCACCACCATTAAATAATAGTCACCATAGTGGTCCTGTTCAACCACCTACACCTACCAAAGTACCTCCCCCATCATCTTCCCcacaacagcagcagcagcaacagcagcagcaacagcaacagcaacaacaacaatcaCCACAAACACAGCCTCAGCAACACCAGCAACCACCTATTCAGCACCCTCCCCCTGCACAATCACCATTACACCATCACCATCCTCATCATCCACCCCCTCCAGGACCCCATATGCATCCACATGCTCATCAAATGCATTCAATGCAGCAAGGCACTTCTCCTGGACCACCTCCACCCGTCTCACCTGGTCCCAGGCCTCATACACCACCTCATCCTCACTACCTCAAGCAACACTTACAGCAACAACACAAAGGGCCTGGAGGCTATCAAACATCAGGTCCAATTCCACCTAATTCTGGACcaggaaattatttaaattcaatgccTCCACATAGTATGGGTCCACCAGCACCAGTTCAATCTAATACTGGTCCTCCAATGGCTCCACCAAATCCTTCAATGATGTCAGTTGACCATGAAGTATCACAGCAACAGCAAAGCCTTAGTGGTGTTGTGACTTCTGTTGTTACCACTGGACCTGATGGTACTGCTATTGATGATGCAAGTCAACAATCAACTCTATCAAATGCCTCAGCGGCTTCTGGCGATGACTCAAATTGTACAACAcctaaaagaaaagaaaacatGAGTGGTGGTATGATGTATCAACAAGGAATGGGTGGTATAATGGGACCACCGTGTTCACCTGCCCATGATGAGTATTCAAACCCGGATCCAATGGCACCTGCTTGGCCTAGAGGACCTCCATCTCATAACCCAGTATTTAATAGCCACATAGCTCCTCAAAACGAACATGTATATCGaccaaaaaaacatGACAGCTTGAGTAAATTGTATGAAATGGATGATAATCCAGAACGACGCATTTGGTTGGAtaaattgttacattttatgGAAGAAAGAGGAACACCAATCTCTACATGTCCTACTATTTCTAAAAACCCCCTTGATTTGTTCCgcttgtatatatatgttaaagaGCGAGGGGGTTTCATGGAAGTTTGCAAGgtaacaaaaaataaaatatggaagGACGTTGCTGGTTTGTTGGGTATCGGTGCATCATCTAGTGCAGCTTACACTCTAAGAAAGCATTACACTAAAAATTTATTACCGTATGAATGTCACTTTGATCGTGGAGGCATAGAtcctatacctataattaatcAAGTTGAATCTTCctcaaagaaaaaaagttCTAAAGCAACATCTGTGCCTTCTCCTGGTTCTGCAGGATCTAATTCTCAAGACTCGTTACCATCTGCACCAACTGCTCCAGGACCAGGCCATGTAGATGGTTACCCAGGATATGGAGGTTATAGTGGTCCACAAGATTATAATTCACCTCAAAGACCTCCACATCCTCCTCATGGAACACAAGGAAGTTACCAAGGACAAGGTGGATACAATCAGCAGTATCCAGGCAGCAATGATCAGTATGGACAACATTATCCACCAGTTAGTACTCCGGTTGGTTACCCGAGTGGCCCAGTGAGACCACCTTTATATCCACCTTATTCAAATGATGCTGACagaaattatgGTGGTTCAGTTCCTCCTCCACAAGGTCCACCAAATACTCCTCAGGGACCTGGCAATGGTCAAGATCCATATGGACGTGGACCAGTTCCACCACCATCTGGCTATCAACAACCACCCAGGTTTCCTGGTCCCCCGCCACCTCAGAATTCTTCACCTGCTACAGTAAACCAAACACAAGGTGGATCAGTTTCTACCCCAGGCTATCCACCTGGTCAACAACCTCAACCTGATTATTATCGACAAGAACCTCCtgctagTCCTGGATATCCACCTACTAGTGCTCCAGGTACTTACCCAGGAAAAGGAATGCCACCACCACAGCCAAGGCGTCATCCTGATTTTGCTAAAGATCAACAAGCTGGTCCTCCTCAGCCAGCTGGTTATCCAGGTTATGGTCCTCAGCAACGACCTATGTATCcagGATGGACAGGTACACCGAATGCTGCTTCTAATCAATATCCAAGACCTGGATATCCACCAGGATCTCAACCACCACAGAATTGGTCACAGGGTCCACCGCGTTCTATGCCTCCTTCACACCCAGGACAACCACCTCAGTGGGAACAACATAGATATCCTCCACAAGGACAACCTTATGGTGCACAACAAaatCATTGGGGTCCAATGGCGCAAGCACAGATGAGAATGCCAAGACATGGATATCGCCCTGACGGAAGTAAACCATATGGACCACATGGTCCAATGGCTCCACCACCACATATGAagccTGGAATGCCCGGACAACCAATGTTTCAAGGCAGTAGTTTATTGAAGCGAGAAGTCATTTTCCCTCCTGACAGTATAGAAGCAGTAACACCAATTCTTTATAAACGTCGTCGAATGATGCGGCACGATGTTGCACCCGTGGATGCATGGCGATTGATGATGTCTTTACGTTCTGGCCTTTTAGCTGAGTCTACTTGGGCCTTGGATGTGCTCAATATATTGCTATTTGATGATGTGTCTATACCCTTTTTTGGACTAACACACATGCCTGGATTATTAGACGTACTCTTAGAACATTTCCGGCAGTCATTGGTTGATATGCTTGATACTGATATCAAATCGTATTGCTGGTATGAAAAGTCTAAAGTGATAGAAGATATACCAGATGTTGGTGCTGTAGATAATGTAAATCCAAATGAAAAAGCATATTTCCCAGATCCTACCTTCCCCAATCAACGACCAATTAAGAATTCCGCAATTATTGATGGATctaaagaattatttattaaaaatggcaAGAGATCATGGGatgtaattgataattatgacATGGGATATAACATAGCTGAAACAGATACAAGTTTTCTTGTGCCTTGTTTTCGTTCAGAGTTTGGCCTTGTGCCATTTGTCAAATTACTGAAGAGTGATAAACCTAAAGCAGAAATATTAGATGATAAGgcatgtataaaaaaagaactaGATGATAAGGAGTTAGTACAAAACAGTATtgacaatattgtaaatataaaaaatattaatgtgcgCGATCCAATGGGCGTATTGAAGCGTAAGAGCATAACAGACTATGAAGATGAAAGTTTCTCTAAAGATGAGTCAAGTTTGTCATTAATAAGCGAAAGTCAAGATTCCATCGGTAAACGGTGTGTGTGCATATCGAATATCTTAAGAAATCTTTCATTTGTTCCTGGTAATGAATTAGAGTTTGCAAAAAGTGGCCCATTTCTTGGTTTGGTTGGCAAGCTGTTATTAACACACCATGAACATCCACTACGCTCATCAAAAACTAGGAATTATGATAAAGCTGACGATGACACTGAGTCATTATTCAATTGTACTACAACAACAGATGCCGATACAATTGAGCCAGGCAATGATGCAAAGTGGTGGTGGGATTACTTAGACGTTGTCAGAGAAAACTTGCTAGTTTCTTTGGCAAACATTGCTGGTTATGTTGATTTAAGCACATTCAATGAAGATATTTCACGCCCTATCTTAGATGGTCTTCTACATTGGGCTATATGTCCAGCAGCTGCAGGCCAAGATCCGTTTCCTTCCGCGCCACTCTCACCTCAGCGACTAGCATTAGAATGTTTATGCAAGTTGTGTGTAACTGATAATAATGTAGATCTGGTCATTGCTACGCCACCTTACTCAAGACTAGAAAAATTGGCCAACGTCCTTACTCGTTTATTATGCAGGACTGAAGAACAAGTACTCAGAGAATTCGCAGTCAATTTGTTACACTACTTAGCAGCTGCAGACAGTGGCATGGCACGTACGATAGCGCTTCAAAGTCCATGTGTTTCATTACTGGTAGCATTTATTGAACAGACTGAACAGAATGCTCTGAGTGTGGTGAACACTCATGGGCTTAATGCACTCCGCGATAATCCAGATTCAATGGGAACTAGTTTAGACATGTTGAGGAGAGCAGCACGAATATTGTTGCTGTTATCCAGACATCCAGACAACAGGCCCTTGTTCTTGCAACAAGAGCAGAGGTTACTGTCGTTAGTTATGAGCCAGATACTCGACCAGCAAGTGGCAGCCCTCATATCGCGTGTCCTATTCCAATGTTCCAGAAATACGCCGTCTCCTCTCGCCCAATAA
- Protein Sequence
- MCRRIACYLHPFAAVLVLSHSLSPFSLPPVVVKDLTSQNSNDSNCGAGAGNGGTPLRPSPSPTGSTGSRSMSPAVTAPPGGGPPQQQQQQNIPMPPRPPSSQQQPDPGQATQNNRMSHSPMGPQQGYQQQPSPQPPGGMPHMTGPSSGAPVQNPYKMPGPNPYGPPPPVSSHSGYPSQQQPAPPMGSYPQQPPGNYGARPPGIPYQGYPPPNSNGPPQQYSPRGMPMHHGPPHQFPPYQGWPGSGPPQAPPPLNNSHHSGPVQPPTPTKVPPPSSSPQQQQQQQQQQQQQQQQQSPQTQPQQHQQPPIQHPPPAQSPLHHHHPHHPPPPGPHMHPHAHQMHSMQQGTSPGPPPPVSPGPRPHTPPHPHYLKQHLQQQHKGPGGYQTSGPIPPNSGPGNYLNSMPPHSMGPPAPVQSNTGPPMAPPNPSMMSVDHEVSQQQQSLSGVVTSVVTTGPDGTAIDDASQQSTLSNASAASGDDSNCTTPKRKENMSGGMMYQQGMGGIMGPPCSPAHDEYSNPDPMAPAWPRGPPSHNPVFNSHIAPQNEHVYRPKKHDSLSKLYEMDDNPERRIWLDKLLHFMEERGTPISTCPTISKNPLDLFRLYIYVKERGGFMEVCKVTKNKIWKDVAGLLGIGASSSAAYTLRKHYTKNLLPYECHFDRGGIDPIPIINQVESSSKKKSSKATSVPSPGSAGSNSQDSLPSAPTAPGPGHVDGYPGYGGYSGPQDYNSPQRPPHPPHGTQGSYQGQGGYNQQYPGSNDQYGQHYPPVSTPVGYPSGPVRPPLYPPYSNDADRNYGGSVPPPQGPPNTPQGPGNGQDPYGRGPVPPPSGYQQPPRFPGPPPPQNSSPATVNQTQGGSVSTPGYPPGQQPQPDYYRQEPPASPGYPPTSAPGTYPGKGMPPPQPRRHPDFAKDQQAGPPQPAGYPGYGPQQRPMYPGWTGTPNAASNQYPRPGYPPGSQPPQNWSQGPPRSMPPSHPGQPPQWEQHRYPPQGQPYGAQQNHWGPMAQAQMRMPRHGYRPDGSKPYGPHGPMAPPPHMKPGMPGQPMFQGSSLLKREVIFPPDSIEAVTPILYKRRRMMRHDVAPVDAWRLMMSLRSGLLAESTWALDVLNILLFDDVSIPFFGLTHMPGLLDVLLEHFRQSLVDMLDTDIKSYCWYEKSKVIEDIPDVGAVDNVNPNEKAYFPDPTFPNQRPIKNSAIIDGSKELFIKNGKRSWDVIDNYDMGYNIAETDTSFLVPCFRSEFGLVPFVKLLKSDKPKAEILDDKACIKKELDDKELVQNSIDNIVNIKNINVRDPMGVLKRKSITDYEDESFSKDESSLSLISESQDSIGKRCVCISNILRNLSFVPGNELEFAKSGPFLGLVGKLLLTHHEHPLRSSKTRNYDKADDDTESLFNCTTTTDADTIEPGNDAKWWWDYLDVVRENLLVSLANIAGYVDLSTFNEDISRPILDGLLHWAICPAAAGQDPFPSAPLSPQRLALECLCKLCVTDNNVDLVIATPPYSRLEKLANVLTRLLCRTEEQVLREFAVNLLHYLAAADSGMARTIALQSPCVSLLVAFIEQTEQNALSVVNTHGLNALRDNPDSMGTSLDMLRRAARILLLLSRHPDNRPLFLQQEQRLLSLVMSQILDQQVAALISRVLFQCSRNTPSPLAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00670023;
- 90% Identity
- iTF_01432815;
- 80% Identity
- -