Basic Information

Gene Symbol
osa
Assembly
GCA_013282895.1
Location
scaffold:23307983-23322180[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-25 6.1e-22 78.4 0.0 3 89 695 781 693 781 0.91

Sequence Information

Coding Sequence
ATGTGCAAAGAATGCGTGTCGTCGTCGTTAGCCGTTCATATTATAGTATATTTTAATATAGGTTCCCGGCGGCCGACGCTCGGTCGGCGGTCGGCCCGGCGTCCCGAGCATCCATTATTTGCGCCGTTACCCCAATACCCCGCCACGTCGTCCCCGAGCATGAACGTTGCTGCTATAGCAGCACACTCGACTCGAGTTCCAGTCCGCGCGCGCTCTCCCCCTCAGACCCCCCAGGGGACTTTGTTTGGCTGGTCGGTGAACGGCGGCGCGCTATCGTTTCACCTCGCGTCCATAGCTGACGCCGCCACCGAAACACTCGGGAACGACGCCACTGCGTGGTCGCCGCGAACGGCCGGAACTAAAATTTCGATTTTCGGCACTCGACGTTCGCCGCCGCATCGTGTCCACGATGTTGTACTCGGTACCAGCGTCGATTTGACAAGTCAAAATAGTAATGATAGCAATTGTGGTACGGGAGCTGGAAATGGCAACACGCCTTTGCGACCATCACCGTCGCCAACAGGATCTACTGGATCACGTTCCATGTCGCCTGCTGTCACTGCACCTTCAGGCGGACCACCTCAGCAGCAACAACAACCACAACAACAGCAGCAACAGAACATTCCAATGCCACCTAGACCACCTAGTAGTCAACAGCAGCCCGATCCAGGACAAACGACTCCAAATAACAGAATGAGTCATTCGCCAATGGGGCCACAACAAGGATATCAACAACAACCTTCGCCTTCGCCTCAGCCACCAAGTGGGATGCCTCATATGGCAGTTCCTTCGCCTGGTCCCCCAGGGAATCCATATAAAATGACTGGTCCAAATCCTTATGGTCCTCCTCCACCTGGATCTACACATAGTGGTTATCCTGCACAACAACCACCACCATCAACAATGGGATCATATCCACAACAACCTCCTGGAAATTATAGTGCTAGACCTCCGAGTTTGCCTTATCAAGGATATCCACCACCTAATAGTAATGGCCCTTCGCAACAATACTCTCCTAGAGGTATGCCAATGCATCATGGACCGCCTCATCAATTTCCTCCTTACCAAGGATGGCCTGGTAGTGGTCCACCACAAGCACCACCTCCATTAAATAATAGCCACCATAGTGGTCCTGTTCAACCACCTACACCTACCAAAGTACCTCCCCCATCATCTTCCCCACAACAACAGCAACACCAGCAGCAGCAGCAACAACAACAACACCAGCAGCAGCAACAGCAACAACATCAACATCAACAACCACCAACACCACAACAATCACAACAACAACAATCTCCAATTCAGCACCCTCCCCCTGCACAATCCCCAATACACCATCATCATCCTCATCACCAACCACCTCCTGGACCCCATATGCACCCGCATGTTCATCAAATGCATCCAATGCAACAAGGTGCTTCTCCAGGGCCGCCGCCACCTGTCTCGCCAGGTCCCAGGCCTCACACACCACCTCATCCACACTACCTCAAACAACATTTACAGCAACAGCATAAAGGTCCTGGAGGATATCAGACATCAGGTCCTGTACCATCAAGTCCCGGTCCAGGAAATTATTTAAATTCAATGCCTCCTCATAGTATGGGCCCACCAGCACCAGTTCAATCTAATTCTGGTCCTCCGATGGCACCACCTAATCCTTCAATGATGGCTGGTGATCATGAAGTTTCACAACAACAAAATCTTAGTGGTGTTGTTACTTCTGTTGTTACTACGGGACCTGATGGTACTGCTATTGATGATGCAAGTCAGCAATCTACTCTATCAAATGCCTCTGCAGCTTCTGGTGATGATTCAATTTGTACAACACCTAAAAGAAAAGAAAATACCAGTGGTGGTATGATGTACCAACAAGGAATGGGTGGAATAATGGGTCCACCTTGTTCACCCGCTCACGACGAGTATTCCAATCCAGATCCAATGGCACAGGTTTGGCCTAGAGGACCTCCACCTCATAATCCAGTATTTAATAGTCATATAGCACCTCAAAATGAACACATATATAGAGCAAAGAAACATGATAGTTTGAGTAAGTTGTATGAAATGGATGATAATCCAGATAGACGTATTTGGTTAGATAAACTGCTACATTTTATGGAAGAAAGAGGAACGCCAATCTCCACATGTCCTACTATCTCTAAAAATCCTCTAGATTTGTTCCGGTTATATATTTATGTTAAAGAACGAGGGGGTTTCATGGAAGTATGCAAGGTGACAAAAAATAAAATATGGAAAGATGTAGCTGGTTTGTTGGGTATTGGTGCATCATCGAGTGCAGCTTATACTCTTAGAAAACATTACACCAAAAATCTGTTACCTTATGAATGCCACTTTGACCGAGGAGGTATAGATCCAATACCTATAATTAATCAAGTTGAATCTTCTACAAAAAAGAAAAGTTCTAAAGCAATTTCTGTACCCTCTCCTGGATCCAATTCACAAGATTCATTACCATCTGCACCAACTGTCCCAGGACCAGGTCATGTGGATGGTTACCCAGGATATGGAGGTTATAGTGGTCCACAAGATTATAACTCACCTCAGAGACCTCCACACCCTCCTCATGGAGCACAAGGAAATTACCAAGGACAAGGTGGTTTTAATCAGTATCCAGGCAGCAACGATCAATATGGACAACATTATCCACCGGCTAGTACTCCCATAGGTTACCCAAGTAGTCCAGTGAGACCACCTTTATATCCACCTTATTCAAATGATACCGACAGGAGTTATGGTGGCTCAGTTCCTCTACAAGGTCCCCCAAATGCTCCTCAGGGACCTGGCAATGGTCAAGATCCTTATAGTCGTGGTCCAGTTCCACAGCCAACTGGCTACCAACAACCACCTAGGTTCCCTGGACCTCCACCACCACCTCAAAATTCTTCTCCTGCAACTGTAAACCAGACCCAGGGTGGATCAGTTTCAACTCCTGGTTATCCACCAGGTCAACAACCTCAACCAGATTATTATCGACAAGAACCTCCTGCAAGTCCAGGATATCCACCAACGAGTACCCCTGGGCCTTATCCTGGAAAAGGAATGCCACCACCACAGCCACGACGTCATCCAGATTTTGCAAAAGATCAACAAGCAGGTCCTCCACAACCTGCTGGTTATCCTGGTTATAATCCTCAACAACGACCTATGTATCCAGGGTGGACAGGTACATCAAATACTGCTAATCAATACCCAAGACCTGGATACCCACCTGGATCTCAACCTCCGCAGAATTGGTCACAGGGTCCACCTCGATCTATGCCTCCATCACATCCAGGACAACCTCCTCAGTGGGAACAGCATAGATATCCACCTCAAGGACAACCTTATGGTGCACAACAGAATCATTGGGGTTCTATGGCACAACCACAAATAAGAATGCCAAGACATGGTTTTCGTCCAGATGGAAGTAAACCGTATGGACCTCATGGTCCAATGGCTCCACCGTCACATATAAAGCCTGGAATGCCAGGTCAGCCAATGTTTCAAGGAAGTAATATGTTAAAACGAGAAGTCATTTTCCCGCCTGACAGTATAGAAGCTGTAACCCCAATTCTCTACAAACGAAGACGGATGATGCGACATGATGTTGCACCGGTCGATGGCTGGCGATTAATGATGTCTTTACGCTCTGGTCTTTTAGCTGAGTCTACTTGGGCATTAGATGTACTCAATATATTACTATTTGATGATATGTCTATACCTTATTTTGGACTAACACATATGCCTGGATTGTTAGACATAATTTTAGAACATTTTCGAGAGTCTTTAGTACATATGTTAGAAACTGACATCAAGTCATACTGTTGGTATGAAAAGTCTAAAGTCATAGAAGATATACCAGATGTCGGTGGAGTAGATAATATTAATCCAAATGAAAAAGCATATTATCCTGATCCATCTTTTTCTAACCAACGACCAATTAAAAGTTCTGCAATTATTGATGGATCTAAAGAATTATTTATTAAAAATGGCAAGAGATCATGGGATGTAATTGATAATTATGACATGGGATACAATATTGCCGAAACAGACACAAGTTTTCTAGTACCTTGTTTTCAATCAGAGTTTGGTCTTGTGCCTTTTGTTAAACTGTTAAAGAGTGATAAACCCAAAGTTGAAATATTAGATGATAAAACATGTATAAAAAATGAATTAGATGATAAGGCGTTAGTACAAAACAGTATTGACAATATTGTAAATACGAAAAATTTAAAAAATATTAATATACGTGATCCAATGGGCGTATTAAAATGTAAAAGTATATCGGACTATGAGGATGAAAGTTATTCTAAGGACGAGTCTAGCTTATCATTAATTAGTGAAAGCCAAGATGCCATTGGTAAACGATGTGTATGTATATCTAATATTCTACGGAATCTTTCATTTGTACCCGGTAATGAATTAGAATTTGCAAAAAGTGGTCCATTTCTCGGTTTAGTTGGTAAACTGCTACTGACTCACCATGAACACCCATTACGCTCATCAAAGACTAGGAATTATGATAAAGCAGATGATGACACAGAATCATTATTTAATTGCACGACAACAACTGATGCTGATACAATTGAGCCGGGCAATGATGCCAAATGGTGGTGGGATTATTTAGACGTTGTCAGGGAAAACTTGCTCGTTTCTTTGGCTAACATTGCCGGTTATGTTGATTTAAGTACATTCAATGAAGATATTTCACGACCAATTCTAGATGGTTTGTTACATTGGGCTATTTGCCCAGCTGCTGCTGGTCAAGATCCATTTCCGTCAGCCCCATTGTCACCTCAGCGATTAGCACTTGAATGTTTATGTAAACTATGCGTTACTGATAATAACGTAGACCTTGTCATTGCCACACCGCCATATTCGCGTTTGGAAAAGTTAGCCAATGTCCTCACCCGGTTATTATGTAGGACTGAAGAACAAGTACTAAGAGAATTTGCAGTTAATTTATTGCACTACTTAGCAGCAGCAGACAGCAGTATGGCACGTACAATAGCACTTCAAAGCCCGTGTGTTTCGTTACTAGTGGCATTTATTGAACAGACTGAACAGAATGCACTGAACGTGGTAAACACACACGGATTAAATGCACTACGTGACAACCCAGACTCTATGGGTACCAGTTTGGATATGTTAAGAAGAGCAGCGCGCATACTGTTGCTGTTATCCAGACATCCAGATAATAGGCCGTTGTTTCTCCAACAAGAACAAAGGTTGTTGTCATTAGTCATGAGCCAAATACTCGACCAACAAGTTGCGGCCCTCATATCGCGTGTCCTATTCCAATGTTCCAGAAATACGCCGTCTCCTCTCGCCCAGTAA
Protein Sequence
MCKECVSSSLAVHIIVYFNIGSRRPTLGRRSARRPEHPLFAPLPQYPATSSPSMNVAAIAAHSTRVPVRARSPPQTPQGTLFGWSVNGGALSFHLASIADAATETLGNDATAWSPRTAGTKISIFGTRRSPPHRVHDVVLGTSVDLTSQNSNDSNCGTGAGNGNTPLRPSPSPTGSTGSRSMSPAVTAPSGGPPQQQQQPQQQQQQNIPMPPRPPSSQQQPDPGQTTPNNRMSHSPMGPQQGYQQQPSPSPQPPSGMPHMAVPSPGPPGNPYKMTGPNPYGPPPPGSTHSGYPAQQPPPSTMGSYPQQPPGNYSARPPSLPYQGYPPPNSNGPSQQYSPRGMPMHHGPPHQFPPYQGWPGSGPPQAPPPLNNSHHSGPVQPPTPTKVPPPSSSPQQQQHQQQQQQQQHQQQQQQQHQHQQPPTPQQSQQQQSPIQHPPPAQSPIHHHHPHHQPPPGPHMHPHVHQMHPMQQGASPGPPPPVSPGPRPHTPPHPHYLKQHLQQQHKGPGGYQTSGPVPSSPGPGNYLNSMPPHSMGPPAPVQSNSGPPMAPPNPSMMAGDHEVSQQQNLSGVVTSVVTTGPDGTAIDDASQQSTLSNASAASGDDSICTTPKRKENTSGGMMYQQGMGGIMGPPCSPAHDEYSNPDPMAQVWPRGPPPHNPVFNSHIAPQNEHIYRAKKHDSLSKLYEMDDNPDRRIWLDKLLHFMEERGTPISTCPTISKNPLDLFRLYIYVKERGGFMEVCKVTKNKIWKDVAGLLGIGASSSAAYTLRKHYTKNLLPYECHFDRGGIDPIPIINQVESSTKKKSSKAISVPSPGSNSQDSLPSAPTVPGPGHVDGYPGYGGYSGPQDYNSPQRPPHPPHGAQGNYQGQGGFNQYPGSNDQYGQHYPPASTPIGYPSSPVRPPLYPPYSNDTDRSYGGSVPLQGPPNAPQGPGNGQDPYSRGPVPQPTGYQQPPRFPGPPPPPQNSSPATVNQTQGGSVSTPGYPPGQQPQPDYYRQEPPASPGYPPTSTPGPYPGKGMPPPQPRRHPDFAKDQQAGPPQPAGYPGYNPQQRPMYPGWTGTSNTANQYPRPGYPPGSQPPQNWSQGPPRSMPPSHPGQPPQWEQHRYPPQGQPYGAQQNHWGSMAQPQIRMPRHGFRPDGSKPYGPHGPMAPPSHIKPGMPGQPMFQGSNMLKREVIFPPDSIEAVTPILYKRRRMMRHDVAPVDGWRLMMSLRSGLLAESTWALDVLNILLFDDMSIPYFGLTHMPGLLDIILEHFRESLVHMLETDIKSYCWYEKSKVIEDIPDVGGVDNINPNEKAYYPDPSFSNQRPIKSSAIIDGSKELFIKNGKRSWDVIDNYDMGYNIAETDTSFLVPCFQSEFGLVPFVKLLKSDKPKVEILDDKTCIKNELDDKALVQNSIDNIVNTKNLKNINIRDPMGVLKCKSISDYEDESYSKDESSLSLISESQDAIGKRCVCISNILRNLSFVPGNELEFAKSGPFLGLVGKLLLTHHEHPLRSSKTRNYDKADDDTESLFNCTTTTDADTIEPGNDAKWWWDYLDVVRENLLVSLANIAGYVDLSTFNEDISRPILDGLLHWAICPAAAGQDPFPSAPLSPQRLALECLCKLCVTDNNVDLVIATPPYSRLEKLANVLTRLLCRTEEQVLREFAVNLLHYLAAADSSMARTIALQSPCVSLLVAFIEQTEQNALNVVNTHGLNALRDNPDSMGTSLDMLRRAARILLLLSRHPDNRPLFLQQEQRLLSLVMSQILDQQVAALISRVLFQCSRNTPSPLAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2