Rmai007612.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- -
- Assembly
- GCA_003676215.3
- Location
- NC:60651495-60654655[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-08 4.4e-05 22.9 4.1 3 46 6 66 4 66 0.89 2 2 0.26 1.8e+02 1.8 0.0 5 19 195 209 195 224 0.84
Sequence Information
- Coding Sequence
- ATGTCTTTAAAAGTGTTATTCACAATAGAAGAAGACATACTATTGGCTGAATCTGTAAGAGAACATCCATGTTTGTATGACTTAAAAAATGCCAATTACAAGGATCAACAAATAAGGGACAATGTATGGAAGCTTATATCAAATAACCTGAATAATAAAAGTGttgATGATTGTAAAAAGAGAtggaaaaatatgaaagatacgtataataaacataaaaggaGTAGGAAACTAGGGACGGGATCatcgacaaaaaataaacaaacaaaatggGCCTTGGCAGATACACTATCGTTTATGGACGTATGTTCTTACGAACGAACgggactgactaattttaattctacGGTTGAAATGAACAATAGTGAAGAAGAAGATAGCTATTTAGAAGTAACTGTTGACGATGAAAACAATTCAAGTGATGAAAACGATGTTTCACAGAAGTCTGCAACAGAAAACACTACAGTTCAGGAAACTgaacttgaaaataatttgaatacaaaaaaaacaaaattattaaaagaaaaaaggcctactaaaaaactaaaacaaaataaagagtTAGTGTCATTGTTCAAAAAAAGTAATGAAGAAAgacaacaaattataaacgCCATTAATAGAGTTGAGGAAGATGATGATCCCattgattcattttttaaaacaatggcATTAACAGTAAAATCGTTTCCtcaacatttgaaaataaaagccAAAAAAGAagtgttcaaaataattacgGATTTggaaatagaaaataacagCACTACATCGACATCAAATAGAAATATTCAGTCAACAAGTAGCTTATTTTCATCTCCAAATCCTAGCATACAATCATCGTCAAACTCAGGATTTTCAACATATGATCGTCCAAGTCAATATGTTTTTCCAGAGACTAATGATTGTCAACCTGGAAATTGGACTCAATCGCTcggtgataataattatgaattacttCAATACGATGATAGACAGTACGAATAA
- Protein Sequence
- MSLKVLFTIEEDILLAESVREHPCLYDLKNANYKDQQIRDNVWKLISNNLNNKSVDDCKKRWKNMKDTYNKHKRSRKLGTGSSTKNKQTKWALADTLSFMDVCSYERTGLTNFNSTVEMNNSEEEDSYLEVTVDDENNSSDENDVSQKSATENTTVQETELENNLNTKKTKLLKEKRPTKKLKQNKELVSLFKKSNEERQQIINAINRVEEDDDPIDSFFKTMALTVKSFPQHLKIKAKKEVFKIITDLEIENNSTTSTSNRNIQSTSSLFSSPNPSIQSSSNSGFSTYDRPSQYVFPETNDCQPGNWTQSLGDNNYELLQYDDRQYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00134212;
- 90% Identity
- iTF_01032834; iTF_01304117;
- 80% Identity
- -