Rmai001662.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- -
- Assembly
- GCA_003676215.3
- Location
- NC:93841222-93844377[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-08 1e-05 25.0 3.6 1 46 4 66 4 66 0.91 2 2 0.7 4.8e+02 0.4 0.0 5 20 195 210 195 224 0.83
Sequence Information
- Coding Sequence
- ATGTCTTCAAAAGTGTCATTCACAATAGAAGAAGACATACTATTGGCTGAATCTGTAAGAGAACATCCATGTTTGTATGACTTAAAAAATGCCAATTACAAGGATCAACAAATAAGGGACAATGTATGGAAGCTTATATCAAAtaacttgaataataaaagtgttgATGATTGTAAAAAGAGAtggaaaaatatgaaagatacgtataataaacataaaaggaGTAGGAAACTAGGGACGGGATCatcgacaaaaaataaacaaacaaaatggGCCTTGGCAGATACACTATCGTTTATGGACGTATGTTCTTACGAACGAACgggactgactaattttaattctacGGTTGAAATGAACAATAGTGAAGAAGAAGATAGCTACTTAGAAGTAACTGTTGACGATGAAAACAATTCAAGTGATGAAAACGATGTTTCACAGAAGTCTGCAACAGAAAACACTACAGTTCAGGAAACTgaacttgaaaataatttgaatacaaaaaaaacaaaattattaaaagaaaaaaggcctactaaaaaactaaaacaaaatgaaGAGTTAGTGTCATTGTTCAAAAAAAGTAATGAAGATAgacaacaaattataaacgCCATTAACAAAGTTGAGGAAGATGATGATCCCattgattcattttttaaaacaatggcATTAACAGTAACATCGTTTCCtcaacatttgaaaataaaagccAAAAAAGAAGTGTTCAACATATTTACGGATTTggaaatagaaaataacagCACTACATCGACATCAAATAGAAATATTCAGTCAACAAGTAGCTTATTTTCATCTCCAAATCCTAGCATACAATCATCGTCAAACTCAGGATTTTCAACATATGATCGTCCAAGTCAATATGTTTTTCCAGAGACTAATGATTGTCAACCTGGAAATTGGACTCAATCGCTcggtgataataattatgaattacttCAGTACGACGATAGACAGTACGAATAA
- Protein Sequence
- MSSKVSFTIEEDILLAESVREHPCLYDLKNANYKDQQIRDNVWKLISNNLNNKSVDDCKKRWKNMKDTYNKHKRSRKLGTGSSTKNKQTKWALADTLSFMDVCSYERTGLTNFNSTVEMNNSEEEDSYLEVTVDDENNSSDENDVSQKSATENTTVQETELENNLNTKKTKLLKEKRPTKKLKQNEELVSLFKKSNEDRQQIINAINKVEEDDDPIDSFFKTMALTVTSFPQHLKIKAKKEVFNIFTDLEIENNSTTSTSNRNIQSTSSLFSSPNPSIQSSSNSGFSTYDRPSQYVFPETNDCQPGNWTQSLGDNNYELLQYDDRQYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00134212;
- 90% Identity
- iTF_01304118;
- 80% Identity
- -