Rmai005127.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- arid3a
- Assembly
- GCA_003676215.3
- Location
- NC:7342980-7411084[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-26 4.5e-23 80.8 0.0 2 89 175 260 174 260 0.96 2 2 1.1 1.5e+03 -1.0 0.8 67 86 332 350 315 351 0.66
Sequence Information
- Coding Sequence
- ATGAAAATGACGATGGATGCCACAGACAGCGCAAGACTTGGCTTAAACTTGAATTTGAGCGTGCAACCTCAATCATATCATTGGATTCAATCACCTAAAGGTACTGATGACGAGGATGAAGATGACCGTAGAAGAGTGGATGACGATTGTTCACCGGAAGAAGAACCGGATATCCTGGAAATGCAgagAGAAGAACGTGAAACTCTTAATCAGTTGGCTCGTCGTTTGGCAAGTGGATCACATGGACTGATGGGAAGTCACACTGCGTCTATGTTACAACATTTTGCTTACCGTCATCCTAATGGGATACCTATGTCTGATCAGATTGTCATGCCAATACCCTCTAGACGACCGGCCAATATAGAATCACCACCGGGATCTAGTCGATCAGGTGACACACCTCTTGGTCATGAATATACGCCGGAAAATGAGTCGTCTCTGTTGGCCAGAAAGGGTGAAGCACAATCGTGGACTTTTGAAGAACAGTTTAGACAGctATATACTGCGGGCAACGAGACAGACAGACGCAGTTTCCTGGATTCACTGTTTAGTTACATGCAGGAACAAGGGACTCCGATAAGCCGACTACCCATCATGGCTAAACGTGTGTTGGACCTGTACACGCTGTACAAACTGGTCGTACAAAGAGGAGGAATTGTGGCGGTCATCACTAAAAAATTGTGGCAAGAGATAATTCGAGGCTTGGGCTTACCTCCGTCCATCACCAGCGCGGCTTTCACGTTGAGAACtcaATATGTCAAGTACCTGTACGCGTACGAGTCGAAAATGAATCAGTTCAGCTCGGTAGACGAACTGAATATGGCCATAGCCGGAAACCGGCGCGAGGGCCGCCGGAACAAGTCTCTGATGTCCGAGTACATGCCCGCGCTCCCAGCGACCACGGTTGCCGGCCACCTGCATCACCACGGCCAACTGTCGTCGGCGGCGCACGGCCAACACCACCACAATCACCAGCAACAGCAGCACCATCACCAGCAACAGCAGCACCATcaccagcagcagcaacagcacTACGCCAACGTGCTAGCCGCCGACGATCGGTTCCGCCACTTGGCCGCCGCCATCATAGACAACAGCAGACACCGCGCCGCCACGGAACAGGGCAGACAgcagccgccgccgtcgtcgtcgtcgtcgtcgccgcggCCCGGCAGTCCGATGCAACGACTGTCCCAGCtgcagccgccgccgccgtccgcGGCCGCCGAAGCGTCGCCGTTGTTCAACGGCCACCAACTGCAATTGCCGCCGTACCAATCGGCCACGATGATGGCCGCCGCAGCGCATCAGGTAGCGGCCGCCGGCGACCACAGCAGCAAGCAGAgagaaattctCAGTATGTTGATGTGGATGGACTTAATGAGAGTTAATCAAACAGCAGCTATTCCAAGACTTTCAATACAAAACTTGCAACAGTCGTGCAGCCCGTCGCCATACGCCACCGTACCAGCCGCGATGAATCTACAACGTCAGTCTCCGGTCGCGTTGCATTCAAATAACGGACCGGAACAGTGTGAGGCGTTGAATTTAGGTAAAAAAGATCAAGGGACGAACAACAATAACGCAGGTGAAAACGAGGACGAACCGGATCAAAAACGCATCAAGAAGGAACGGTCGCCACGGGTTATCGTGGCTAGTCGTCCCGCCAGTCCCGAGATGACGAGCCCTGAAAGATTTCCGGCGCCAACCATAAATAGTCCGATTCGGGAGTCATCTGCATCGCCTGAACGGTATGGTGACGACAAAGCGGCGGACAGCAACGGTACAATCGAAATGGACATCAGCGTGTCGGCCGGTACGCCTAGCGGTCTCAAAATAAACGTTTgtaaaagaacaaaaaatgGAATTTACAAAGGTCAACTTGTCAAAGTTGAATCAGAATTAAATGGaggaACGAAGAACACTAGACCCTTTATTTTGCGCCTCAATGGTGAACTCTACACAGGATGCCTACAACAACAAAGCAGTCTTGATAATCATGACGACCAACATTCTAGTTAA
- Protein Sequence
- MKMTMDATDSARLGLNLNLSVQPQSYHWIQSPKGTDDEDEDDRRRVDDDCSPEEEPDILEMQREERETLNQLARRLASGSHGLMGSHTASMLQHFAYRHPNGIPMSDQIVMPIPSRRPANIESPPGSSRSGDTPLGHEYTPENESSLLARKGEAQSWTFEEQFRQLYTAGNETDRRSFLDSLFSYMQEQGTPISRLPIMAKRVLDLYTLYKLVVQRGGIVAVITKKLWQEIIRGLGLPPSITSAAFTLRTQYVKYLYAYESKMNQFSSVDELNMAIAGNRREGRRNKSLMSEYMPALPATTVAGHLHHHGQLSSAAHGQHHHNHQQQQHHHQQQQHHHQQQQQHYANVLAADDRFRHLAAAIIDNSRHRAATEQGRQQPPPSSSSSSPRPGSPMQRLSQLQPPPPSAAAEASPLFNGHQLQLPPYQSATMMAAAAHQVAAAGDHSSKQREILSMLMWMDLMRVNQTAAIPRLSIQNLQQSCSPSPYATVPAAMNLQRQSPVALHSNNGPEQCEALNLGKKDQGTNNNNAGENEDEPDQKRIKKERSPRVIVASRPASPEMTSPERFPAPTINSPIRESSASPERYGDDKAADSNGTIEMDISVSAGTPSGLKINVCKRTKNGIYKGQLVKVESELNGGTKNTRPFILRLNGELYTGCLQQQSSLDNHDDQHSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167383;
- 90% Identity
- iTF_00972832;
- 80% Identity
- -