Rmai001395.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- bun
- Assembly
- GCA_003676215.3
- Location
- NC:19284944-19289262[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1 1.2e+04 -5.9 3.6 45 56 575 586 570 598 0.63 2 4 0.52 6.1e+03 -3.1 2.9 28 56 616 644 609 645 0.85 3 4 0.75 8.7e+03 -3.6 5.2 29 53 724 748 720 752 0.83 4 4 5e-30 5.9e-26 89.8 3.6 1 57 982 1038 982 1038 0.98
Sequence Information
- Coding Sequence
- ATGGATGACGGTAGTGCAGATCAAAAAGCCAACGATGTACAAcctgatataaaacaaaattgtgtaGAAAATACTAATTCCATACAACCACCATCTAGTGATAACTGTGTAACCAAAAAGACATCGTTTGAAATCACTAGTATCACTGAACCAAATAACGATGACAACGATGAAGATTCTCCAGACACTGATTCACATGTTCACGACCACAGAACAGTAGATAACAGGCATGAAACTGAATTGCAAAATTATGCTGACAACATGGTTGTATACAATACCTCTAATGATCTAGGCAGTACTGCACCAGTCATACCTACTAGCTCACAATATGGTCTGGCTATTGTTGACAATTCAGAAAGTGGCCATTCTTTAGgttctataaaaaatgaagataTGCATGGTGTTGATGCCAATTCACAAAAGAATGAGTGTGATTTAAATGgtcttcaaaataaaaatagaaatgaaCGATTCAAAGTGGTGAAAATTGAAAGTACAGAACCATTTAAACGTGGTCGTTGGGTATGTATGGACTTTTTAGATCATTCAATGAATCAACAACAAtcaggtaataataaaatattaatggtaaATGGTGATAACAAAGCTTATTCTCAGGCAAATGACTTGGATACAACTGAGCCGTTAGACAATGGCCATCATGAAAGTCCTGAGTTTAGAGTTTGTACTAATAATGTCAGTACTTATACtagtaattgtaataattctgaaaattataaaaatccaacttctacttataatattgtatcgtcTGGTGTAACTACTCCTATCCATAGTGCTTGTGTGTCTCCTGGTCAAAGTTTACAGACTAATATGCAAATCCCAGTATTAACAAGTCAGCCAATTTCAACTTCCGTGCAAGCACCTCAGCCACAAAGTCTTACTCAAGTTCAATTACCAActcagcataataatattaatcagaatTGTTTACCACATTCCAGCTTACAGTCTCATCAAATACAACAAGTTATTGCTAATGCTGGAGTAATGCAATCTCAATTACAACAAACTCAACCAGTTATCAATGTTATGCAAAATCAAAACCCATCAATACAACCACAGTCTATTCAGCATATAAATTCTGTAGATCAGAATGTTTCACAAACTATGCCACAACAATATCAACCTATGTCACAGGCAAATTTGCAACAACAAATTATGCAGCATAACATACCAGCACAGTTTCAAAAGTCATTTGTACCACAGAGTCAATCTGTTTTACCTAACTGTGCACCTATACAGCAATCAGTTAATCAAATGATTAATCAACAAGTTCCTCAATATTACAACTCCACACCAGTCCAGTCTCAAAATGTTTCTTCTGAATCTTCAACTGCCGTCTCTATGTCCAATCAACATATTGGTCAACAGCAATTTCAATCAATACCTATTCAAAATCAACCATTGCAAAATCATGTGCAGTTACAACAAAACCAACAACAGTTGCCACCCCCCGTGCAACAGATGCAACAACAGCCTAGTCCACAACAAAATATGGTACAACAAAATCAAATGCAATCTCAAATGGTACAACAAAATCAGCAATTGTCTCACCAGCCATCTATTTCTCAGCCTAGTCAACCTCAACAAACCCAGTCCGTTCCTCAACAAAGTCAACAAATGTCTCAGCAACAACAACATATTCAACAACCTCAACAAACACCACAACCACAACAGACGACACATGTCCAGCAAGTATCTTCTTcacagcaacagcagcagcagcaacaacaacaagcGCCTCAACAAATTCAACAAGTTGGACAACAATTACAAGGACCACAAGGTTCACAAATTCAGCAGCAATTGCCTCAACAAACTCATCATATCAATCAACTTACTCAAATTAACAATCAACCACATCAAATGCCTCAATCAAATCAAATGCAACAAATAGCTCAGCAAAGTCAGCAAATTTCACACCAACCTCAACAAATTACATTACAGAGCCAACAGATACCCTTACAGACACAATTACAACACTCTAAGCAAATGCAAACCACTCAAATTCAGCCTCAATCTCAACAGATTCCTCAGCAACAGCAGATTTCACAACAACAACCGATTAGTCAGAGTCAAATGattcatcaaaataatcaacaaataAATCATTCAGGGCAAATGATTCCTCAGCAAACTCTTAATCAAGGACAACAGTTAAATCAACAAAACCAACAAGTTCAACAGCAACAACCTCAACAGCAAATACAGCAACAATTAGTCCAAACTAGCCAACCTAGTCAACCAATGTCTCAACAAATTCTTCAGTCAAATCAAAGTATGCCTCAACAAAATCAAGTATTAACTCAACAATTAGGCTTAAATCAATCAAATCCCCAAATGTCTGTATCTCAATCTCAAAACCAACAAGTAATTCAACCTCAACACCTACAACAGACAGGACAGCAATATCAACAACCTCAACAAATGATGCAATCTCAGCCTCAACAATTACCAATGCAAAATAATCAATCCATTATGCATCAACCAACTTATTCACAGGCTCAAAGTTTGAATGCTATGCAACTTCAACAAGCTGTAATGCAAATTCCGACTAATACTGTTACATCCACACAAATGCATATTCAGCAGCAACAGCCAGTGGGTCAATCCAATATGATGCAACAACCTCAAATTACCGTTATGCCACAAAATAACATACAACCCACAATTCCCATGTCCCAACAACAAATGACATATTCACTGCAACAACATGTACCTATTAACCAAAACTATGTTAATAGTATGCAAAATTGTTACATTCCTTCCCAACAACAAATGGCTACATACAAACCTTCAATGAAAACTGTAGAAActgtcaacaaaaaaaaagaagacaaTAATACTGAAGATGTTGATAATGGAACCACTAATAGCGCAACTACTACTGTTGCTATAGATAACAAAATTGAACAAGCTATGGATTTAGTTAAAAGCCATCTAATGTATGCTGTGCGTGAAGAAGTAGaagtattaaaagaaaaaatcgcAGAATTAATGGATAAAGTTGGATTACTAGAAACAGAAAACTCTAATCTTAGGATGCTTGTACCACCAGACATGTTAGAACAATACAAccgtgaaaaacaaaaatctacCAACGGTCAGTCAACTCATAATCAATAG
- Protein Sequence
- MDDGSADQKANDVQPDIKQNCVENTNSIQPPSSDNCVTKKTSFEITSITEPNNDDNDEDSPDTDSHVHDHRTVDNRHETELQNYADNMVVYNTSNDLGSTAPVIPTSSQYGLAIVDNSESGHSLGSIKNEDMHGVDANSQKNECDLNGLQNKNRNERFKVVKIESTEPFKRGRWVCMDFLDHSMNQQQSGNNKILMVNGDNKAYSQANDLDTTEPLDNGHHESPEFRVCTNNVSTYTSNCNNSENYKNPTSTYNIVSSGVTTPIHSACVSPGQSLQTNMQIPVLTSQPISTSVQAPQPQSLTQVQLPTQHNNINQNCLPHSSLQSHQIQQVIANAGVMQSQLQQTQPVINVMQNQNPSIQPQSIQHINSVDQNVSQTMPQQYQPMSQANLQQQIMQHNIPAQFQKSFVPQSQSVLPNCAPIQQSVNQMINQQVPQYYNSTPVQSQNVSSESSTAVSMSNQHIGQQQFQSIPIQNQPLQNHVQLQQNQQQLPPPVQQMQQQPSPQQNMVQQNQMQSQMVQQNQQLSHQPSISQPSQPQQTQSVPQQSQQMSQQQQHIQQPQQTPQPQQTTHVQQVSSSQQQQQQQQQQAPQQIQQVGQQLQGPQGSQIQQQLPQQTHHINQLTQINNQPHQMPQSNQMQQIAQQSQQISHQPQQITLQSQQIPLQTQLQHSKQMQTTQIQPQSQQIPQQQQISQQQPISQSQMIHQNNQQINHSGQMIPQQTLNQGQQLNQQNQQVQQQQPQQQIQQQLVQTSQPSQPMSQQILQSNQSMPQQNQVLTQQLGLNQSNPQMSVSQSQNQQVIQPQHLQQTGQQYQQPQQMMQSQPQQLPMQNNQSIMHQPTYSQAQSLNAMQLQQAVMQIPTNTVTSTQMHIQQQQPVGQSNMMQQPQITVMPQNNIQPTIPMSQQQMTYSLQQHVPINQNYVNSMQNCYIPSQQQMATYKPSMKTVETVNKKKEDNNTEDVDNGTTNSATTTVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEKIAELMDKVGLLETENSNLRMLVPPDMLEQYNREKQKSTNGQSTHNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01330333;
- 90% Identity
- iTF_01037501;
- 80% Identity
- -