Basic Information

Insect: Rhogogaster chlorosoma
Gene Symbol: stc
Assembly: GCA_944452905.1
Location: CALYCC010000049.1:1643614-1648156[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3 3.5e+04 -4.3 1.6 15 19 505 509 504 509 0.81

2 15 0.28 3.3e+03 -0.8 0.3 4 10 538 544 537 546 0.93

3 15 1.1e-06 0.013 16.5 17.2 3 18 554 569 540 570 0.88

4 15 2.1e-05 0.25 12.4 15.2 1 18 606 623 606 624 0.95

5 15 0.35 4.1e+03 -1.1 1.3 5 10 651 656 651 656 0.96

6 15 1e-08 0.00012 23.0 15.8 1 18 662 679 662 680 0.98

7 15 3 3.5e+04 -5.1 3.1 6 12 710 716 710 716 0.88

8 15 0.1 1.2e+03 0.6 12.5 4 18 727 741 720 742 0.86

9 15 3 3.5e+04 -4.4 1.7 5 10 771 776 771 776 0.90

10 15 0.011 1.3e+02 3.7 10.8 1 11 782 792 782 804 0.89

11 15 1e-10 1.2e-06 29.3 14.0 1 19 809 827 809 827 0.98

12 15 3 3.5e+04 -4.3 1.7 6 10 856 860 856 860 0.93

13 15 3 3.5e+04 -7.1 9.6 10 19 874 884 866 884 0.68

14 15 0.00014 1.6 9.8 12.5 1 16 920 935 920 946 0.82

15 15 1.8e-05 0.21 12.6 11.4 1 18 952 970 952 971 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3	3.5e+04	-4.3	1.6	15	19	505	509	504	509	0.81
2	15	0.28	3.3e+03	-0.8	0.3	4	10	538	544	537	546	0.93
3	15	1.1e-06	0.013	16.5	17.2	3	18	554	569	540	570	0.88
4	15	2.1e-05	0.25	12.4	15.2	1	18	606	623	606	624	0.95
5	15	0.35	4.1e+03	-1.1	1.3	5	10	651	656	651	656	0.96
6	15	1e-08	0.00012	23.0	15.8	1	18	662	679	662	680	0.98
7	15	3	3.5e+04	-5.1	3.1	6	12	710	716	710	716	0.88
8	15	0.1	1.2e+03	0.6	12.5	4	18	727	741	720	742	0.86
9	15	3	3.5e+04	-4.4	1.7	5	10	771	776	771	776	0.90
10	15	0.011	1.3e+02	3.7	10.8	1	11	782	792	782	804	0.89
11	15	1e-10	1.2e-06	29.3	14.0	1	19	809	827	809	827	0.98
12	15	3	3.5e+04	-4.3	1.7	6	10	856	860	856	860	0.93
13	15	3	3.5e+04	-7.1	9.6	10	19	874	884	866	884	0.68
14	15	0.00014	1.6	9.8	12.5	1	16	920	935	920	946	0.82
15	15	1.8e-05	0.21	12.6	11.4	1	18	952	970	952	971	0.89

Sequence Information

Coding Sequence: ATGGCAAGCTGGGATGGGTCCTACTACGGGCCTGAGGACCCAAATTTTTATAACGTAGGTAGAAATTGGAACTATTATACTCAAAACGGGTCCAATCCACAATCAAATATTTCTAATCTGGGTCAAGATTCATCAGTCAATACGTACATGCAGGATCCTCAAGCGGCAGGTCACACGCATTATAATAGACAGCAGGCTTTCTTTGAGAATAATAGATCGCAGCCTAATTTACCGTCTTTTAAATGCAAGAGTGGAAATCCAAGCGATAACAATAAGCCGAGGAAGAAGAATTACCATAATAAATTACCGTTTGTTAATCAGCAGATTGATCCAAGCATAGTTGAAAATTCAAACCTGCATGCTACTGCCGGTGAGTTTATACCGAGTAGTTTTAAGGCTTTGCAAGAGCCTGGGACAAGCTCTCTGTCAAATAGCAGAATCGATGTTGAACATTATGAAGCTTTGTCTCAGCAGCCGGAGGGCTCTAACTTCTTGCCAGAAGCTGTAGCAGCTAAACCTTATTATACGGACAATAGGAATAAGCGTGAGAAAAAAGAGAAGAAGTACGAGGCTAAAAAGAACGATAATTACAAGCCGAGAGATAGTCAAGATACTCAGTATCAGGGTAATAATTCGTACAAAAATTCGGCGCGCAATCAAGCCCCAAAGAATCGGAAGTTTCAGAACGATAGATACCCGAATGCGAGACAGTATCCGGAAAATAGTCGCAATTATTCTGTAGATAGAGATAACGATAGGAAAAAATGGCCTGGTAATAGAGAGAGCTTTGAGAACGGCTCTCAGCTTGGAGAAGACGACGGAGGTCAAATGGCGGACGCAGGGGTTAATAAGTACTATAAGAATTCGGTCTATGATAATTCAGTCTCGGCTCGTAATCCGAGACATGATACCGTCTGGCTAAGTAACTGGCAAACTCCTAAGAGTTACAACCAACTTATTAGCGAGTTTAATCAGTCTAGTCATAACTCTGAAACGGAGCATACTCAAGCAATTGGTAAAAATGTTAGGAGATATTTCAACGAAGATCGCGGGGAAAGGTATAGAGATAGGAGAGAGCGGTACAACGATAGATACGAGTCTGCAGTTAGAGAGAAGAAACCTAATTATTCAGATTACAATGGGTATAAAAACAACTATGAAAGAGAAGAAAGAGGGGAAAGGACAAGGGACAAGGACAAATCCAAGGATAAGGATAACTCTCGAGATATTAAGGATAAGGAGTTTGAAAATTGGCGTCATAAAATCAGCGAAGACGACAAAGGAAGCGGTGTGAAAAAACCGAATAACAAAAGACACGAGAAAGACGACGATGCGAGTCAGAGGGAACGTCTCACCGAACAACTGAACAGAGGTCAATTGGAGTGTTTGGTATGCTGCGATCGTGTTAGACAGCAGGATGCTGTTTGGTCATGTTCAAACTGCTATCACGTTCTTCATCTTAAGTGTACAAAAAAATGGGCAAAATCCTCACATGCTGAAAATGGATGGCGCTGTCCAGCGTGCCAAAACGTAACGTCGGCAATCCCAGAGGAGTACTATTGTTTTTGCGGTAATAATAGCAACCCAGAATGGAATCGTCGAGACGTAGCTCACTCTTGTGGAGATGTGTGTGGTCGTCTGCGATCGCAAACCAACTGTATACACAAATGTAATTTATTGTGTCATCCCGGGCCGTGCCCGCCTTGTGTCGCAATGGTTACTAAGCATTGCGGCTGCGGAAGGACTTCTCAGACGTTGAAATGCAGCACTGGGACGCCTTTGCTGTGCGCATCGACTTGCGAGAAAATTTTAAACTGCACTATCCATACTTGCGAAAGGAATTGCCATCACGGAGAGTGTGGGAATTGCGAGAAACTGGTTCGTCAAGAATGTTACTGTGGCAAAGCTAGCCGCGATGTTCCGTGTGTAGCAGATGTTTCACCGACCTACACTTGCCAATCTGTATGTAACAAGTTATTAGAATGCGGTAATCACCATTGCAAGGACTTGTGTCATCCGGGAGCTTGCCAGCCATGTGTTCTGAGACCAGAAGCTGTCTCGCATTGCTGTTGTGGGCAGACGCCTTTGACTGAGCCGAGAACTAGCTGTATGGATGAGATTCCAGTGTGCGATAAAACGTGCTGTAAACGTCTGAAATGTGGACAGCCCAGTAATCCTCACGTGTGTAAAGCCAAATGTCACCAAGAAGAATGTCCCGATTGTGAAATGACAACTAAAGTAAAATGCCGGTGCGGCAATATGGACAAGGAAATACCGTGCAAAGAATTAACGTCTAAAGCCGATGATGCTCGCTGCCAGAAACGATGCACTAAAAAACGATCTTGCGGTAGACACAAATGTAATCAGATGTGCTGCATCGATATCGAACACATCTGTCCATTGCCTTGCACACATTCACTCAGTTGCGGCAGACACAAGTGCGAACAGACTTGTCACAAGGGCAGATGTCAGCCCTGTTGGCGCAGCAGTTTTGAAGAACTTTACTGCGAGTGCGGTGCGGCCGTAATATACCCTCCGGTACCGTGTGGAACGAGACGTCCAGTCTGTGAGAAACCCTGTTCTCGAGAGCATCCATGCGGCCATCAGGTTCTGCACAATTGTCACAGCGAGCCGATCTGTCCACCTTGTACAGTTCTCACGCAGAAATGGTGTTACGGCAATCACGAGCGTAGGAAAGCAGTCCCATGTCATGTTAACGAAGTTTCATGCGGATTGCCGTGCAACAAGCCATTGTCGTGCAAAAGGCACAAATGTATAACAATTTGTCATCCTGGTCCGTGCGCAAAATCCGGGCAAGTTTGCGCCCAGCCTTGTACAACCCCGAGAGAATTATGCGGACATATTTGTTCTGCGCCGTGCCACGATGGAAAGTGTCCTGAATTAGCGTGTAAAGAAATGGTCAAGgtgacttgtcaatgcggacatagaagcatgagtcgagcttgtgcagaaaattctcgtgagtttcagagaatagctagtggaattttggccagtaaaatggccgaaatgcagctcggtcattcggtggatttggaagatgtcttgggacaaagcgcaaggaaacaaaatcaattgaagactctggagtgtaatgaagagtgtaaaatgattgagagaaatcggaaattggcgctaggattgcaaatcgctaatccggatttgagcggaaagttgatgccacgatacacagagttcatgaagcaatggggAAAGAAGGATCCGAACTTCTGTCAAATGGTACACGATAGATTGACGGAACTAGTTCAACTCGCCAAAATGTCGAAACAAAAATCTAGAAGCTATTCATTCGAAAGTATGAACCGTGACAAGCGTCATTTTGTTCATGAATGTTGTGAACATTTTGGATGCGAGAGTCAGGCGTACGATCAAGAACCTAAAAGGAATATTGTCGCTACGGCTGTTAAAGATAAGtgctggctgccaagtttgagcttacttgaattgttacaaagagaaagtggccagaggaaagtaccaggaccaatgTTGAATGCTGCAAAAGCTTCGAGCTCTCTGAGGAACGTAGAAGTATTACCACTGCCGACTAAAAAGGGTCATAAGATCCAGCCTGCAACGGTGATTCCAAAATCACCTGAGCCTGAAATAGACTACTTTGATTACCAAGGTTGA
Protein Sequence: MASWDGSYYGPEDPNFYNVGRNWNYYTQNGSNPQSNISNLGQDSSVNTYMQDPQAAGHTHYNRQQAFFENNRSQPNLPSFKCKSGNPSDNNKPRKKNYHNKLPFVNQQIDPSIVENSNLHATAGEFIPSSFKALQEPGTSSLSNSRIDVEHYEALSQQPEGSNFLPEAVAAKPYYTDNRNKREKKEKKYEAKKNDNYKPRDSQDTQYQGNNSYKNSARNQAPKNRKFQNDRYPNARQYPENSRNYSVDRDNDRKKWPGNRESFENGSQLGEDDGGQMADAGVNKYYKNSVYDNSVSARNPRHDTVWLSNWQTPKSYNQLISEFNQSSHNSETEHTQAIGKNVRRYFNEDRGERYRDRRERYNDRYESAVREKKPNYSDYNGYKNNYEREERGERTRDKDKSKDKDNSRDIKDKEFENWRHKISEDDKGSGVKKPNNKRHEKDDDASQRERLTEQLNRGQLECLVCCDRVRQQDAVWSCSNCYHVLHLKCTKKWAKSSHAENGWRCPACQNVTSAIPEEYYCFCGNNSNPEWNRRDVAHSCGDVCGRLRSQTNCIHKCNLLCHPGPCPPCVAMVTKHCGCGRTSQTLKCSTGTPLLCASTCEKILNCTIHTCERNCHHGECGNCEKLVRQECYCGKASRDVPCVADVSPTYTCQSVCNKLLECGNHHCKDLCHPGACQPCVLRPEAVSHCCCGQTPLTEPRTSCMDEIPVCDKTCCKRLKCGQPSNPHVCKAKCHQEECPDCEMTTKVKCRCGNMDKEIPCKELTSKADDARCQKRCTKKRSCGRHKCNQMCCIDIEHICPLPCTHSLSCGRHKCEQTCHKGRCQPCWRSSFEELYCECGAAVIYPPVPCGTRRPVCEKPCSREHPCGHQVLHNCHSEPICPPCTVLTQKWCYGNHERRKAVPCHVNEVSCGLPCNKPLSCKRHKCITICHPGPCAKSGQVCAQPCTTPRELCGHICSAPCHDGKCPELACKEMVKVTCQCGHRSMSRACAENSREFQRIASGILASKMAEMQLGHSVDLEDVLGQSARKQNQLKTLECNEECKMIERNRKLALGLQIANPDLSGKLMPRYTEFMKQWGKKDPNFCQMVHDRLTELVQLAKMSKQKSRSYSFESMNRDKRHFVHECCEHFGCESQAYDQEPKRNIVATAVKDKCWLPSLSLLELLQRESGQRKVPGPMLNAAKASSSLRNVEVLPLPTKKGHKIQPATVIPKSPEPEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01413836;
90% Identity: iTF_01413836;
80% Identity: -