Rchl013744.1
Basic Information
- Insect
- Rhogogaster chlorosoma
- Gene Symbol
- SUB1
- Assembly
- GCA_944452905.1
- Location
- CALYCC010000064.1:2965074-2969146[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-21 5.1e-17 62.1 0.5 1 38 62 100 62 108 0.94
Sequence Information
- Coding Sequence
- ATGCCGAAGTCTAAACAGTTTGTAGAGTCTAGCGACGAGAGTAGTGACTCTGAGCCAAAGATGAAAAAAAGTGTACCCAAAAAAGCAAAGAGAGAAGAATCGTCAGAGGATGAGCCAAAACAATCAAAAAAACCTAGAAAGGAAATGAAAAAAGAAATGAAAAAGGAGTCAGCGGAGAGCGTCTGGGAACTGGGAAACAATCGACAAGTAACAGTCAGAGAATTCAAAGGAAAACTATACGTCGATATTAGAGAAATGTATCTGGACAAAGATGGAGATATAAAGCCAGGCAAGAAAGGACAGAAGTTGCAGCAAGGTTCATTCTACGTTAGTAGCAACGCTCTTGAAAATCCATACACAGTTCCCATCGTTGGATCAGATTGGAACTGGCAAGTGGCCTCGAAAATGACTTCTAGTTGCAGACGCAGATCTTGA
- Protein Sequence
- MPKSKQFVESSDESSDSEPKMKKSVPKKAKREESSEDEPKQSKKPRKEMKKEMKKESAESVWELGNNRQVTVREFKGKLYVDIREMYLDKDGDIKPGKKGQKLQQGSFYVSSNALENPYTVPIVGSDWNWQVASKMTSSCRRRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -