Basic Information

Insect: Rhodophaea formosa
Gene Symbol: THAP3
Assembly: GCA_963082605.1
Location: OY720231.1:7995486-8013484[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.8 2.3e+02 3.4 1.4 1 23 352 374 352 374 0.80

2 11 0.019 1.5 10.3 0.7 1 23 381 404 381 404 0.94

3 11 0.36 29 6.2 0.2 1 23 408 430 408 430 0.92

4 11 0.0052 0.42 12.0 1.0 1 23 435 458 435 458 0.98

5 11 0.0035 0.28 12.6 0.7 1 23 462 485 462 485 0.96

6 11 1.1 94 4.6 0.1 3 21 499 517 498 518 0.90

7 11 0.14 11 7.5 0.2 2 23 575 597 574 597 0.96

8 11 0.07 5.7 8.5 0.7 2 20 613 631 612 634 0.92

9 11 6.7e-06 0.00054 21.1 2.5 1 23 640 662 640 662 0.99

10 11 0.00029 0.024 15.9 2.8 1 23 669 691 669 691 0.98

11 11 0.00015 0.012 16.9 3.0 1 23 697 720 697 720 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.8	2.3e+02	3.4	1.4	1	23	352	374	352	374	0.80
2	11	0.019	1.5	10.3	0.7	1	23	381	404	381	404	0.94
3	11	0.36	29	6.2	0.2	1	23	408	430	408	430	0.92
4	11	0.0052	0.42	12.0	1.0	1	23	435	458	435	458	0.98
5	11	0.0035	0.28	12.6	0.7	1	23	462	485	462	485	0.96
6	11	1.1	94	4.6	0.1	3	21	499	517	498	518	0.90
7	11	0.14	11	7.5	0.2	2	23	575	597	574	597	0.96
8	11	0.07	5.7	8.5	0.7	2	20	613	631	612	634	0.92
9	11	6.7e-06	0.00054	21.1	2.5	1	23	640	662	640	662	0.99
10	11	0.00029	0.024	15.9	2.8	1	23	669	691	669	691	0.98
11	11	0.00015	0.012	16.9	3.0	1	23	697	720	697	720	0.93

Sequence Information

Coding Sequence: ATGCGGTGCAGTGTTCCTAGTTGTACTAACGATTCGAAAAGAACATCTAAAAGCCATGGAATCACATTTCATATGTTTCCAAAAGAGCCAAGCACTCTGGCAGCATGGATTGAAGCTCTCGGCATGGCAGACTGGGAGCCTAAAGAACGTAGTGCAATATGTTCAGACCACTTTAAGAGTGATGATTTCTATTTGACTGTTCATGGACTGCGGAGAATACGGAGTGGGGCAGTGCCTGTTGTTTCGCATCTTACAGAGGAAGATCTGGATTCTCCAGCTGCTTCGAAAGTGTGCAGGATATGCCTGTCAATGGACGCCAAGCTGTACGATTTGAGGGATTTCAAGCTGGACGAGATGTTTGAGCAGGTCACCGGGCAATTTATCAACGAAGAGGACAAATTACCACAAAAGCTTTGTTGGGAATGCGCTCACCGAATCTCAGTCTGCTCTCGGTTTAAAACTAAAGCCATGCGGAGTCAGGATCTCATGATGACCGTGCTGCAGACTGCTTCTTATATCACAATGAGAGACATAAAGTCTATAAACCGAACTCTGAACCAGCTGAAGTCGCCTCTAATACAGAAGATATACGACCCAGATTGGTCTGACATGGTGATAGTAGATGATGAGGTCATAATCAAGCCAGAGGACCAAAGGGAAGAGATCAAAGTGGAAACTGATGAGATCCCTATAGAACTGGAAGTGAAAGATGAAGACGATTCAAACGAGATATTCTTCCAAGACTACATGGACGGCTACGACAGCGAAGACGACAAGACCCTCAGCGAAGTGTTTACCACTAACGCGATGAAGAAGTCGAAGAAGGTGAGGAAGAAACGGGAGAAGGTGAAAGTGGAGAAGAAGAAAAAGCGGTGCGAAGACGATGGCAGTCCTACATCTACTATGgataaGTACAAAACAGCAGACGTGAAACGGAGAAAAACACAAGAGGCGTTAGACGAAAATCTATTCAACATAACAACTTTGACGTATGAACAACAAATAGCGGAGATAACGAAGAGACAGGAGTCGGATGCGTACAAAAATGCGATCTACAAATGTACGGTGTGCTATAGAGGGTTCCACATCCGAGACAGATACGACGCGCACGCAGTCAGGCACACAGACCAAAGCGGGGCGTACGAATGCTTCATCTGCAAAACGAGGCTCAAGACCGGACGGGCGCTGCGGAAACATATAACGGCTCAACATACAGAACAGTACAGTTGTAAAGGCTGTCCGTTTGTCACCAGAAACAGGGGTGTAGCGAGAGAACACGAAAAATGGCATTCAGGAACGAAATACCAGTGTCCACATTGTCCAAGTGAATTCGATAAACTCACAACGTACATGGGTCACATACGTATAAAGCACGTATCGGACTTCGTCTGCGAACTATGTGGCTACACGTTTGTCAGCAAAAAGGGCATTGACGTTCACAAGAAGAAGAAACACAGACTTGCTGAGAAAACGATGCCCTTAGAAGGCCCGTACTGCGCggtgtgtgacgtcactttcGTCTCGGAGGATGCTCATGAACGACATCTGAAGCTCTCTTCAAAACACAGCAGTGATAATGATCCAAATCGCATAAGAAACGACTCTCAAAGCATGCACACGGAGAAAAACGGCAGAGTGATGAGGAAGATCGAGAGGCGGCCGGTCATTCACCCGCGAGACCCGAACAACCTAGAGTGCAGGCCCGACCAACCGGGACCCGTGACCTGCGAACAGTGTGGCCTTCAATTGCGCGATTTGCGTCTGTACGCGCAACACTTCAGACGGGCGCACCCTGACAAAAATAGGACCAAATACCCCGCTATGAAGACACCCTGTATGTGCGAGCAGTGCGGACGGCTCTTCCAGaGCATGGCCCTCCTCAAAGACCACATGTGGGTCCACACAGGCGAGAAACGCTTCAAATGCGAGCGATGTGATAAGAGCTTCACGCAAAAGACCAACTTAGTATTCCATATGAGGGTACACAGTGCGACCCGGCCGACTTACGAATGTCCTCTATGCGGGAAACACTTCGCGTTCTTCAACAACCGACGGAGGCACATGTTTattcacaCGGGGCTAAAACCGTTCAAATGCGACACTTGTGGCAAATGCTTCACGACGTCTGGCGAGCAACGCGCTCACGTTGAACATGTACATCTCAAGAAACCCTGGCCAAAACGAGCGAGACCTAGAGCGCGCGATGACTGGCAAAAATGTGCTTTAAGTATGGAGGACTAA
Protein Sequence: MRCSVPSCTNDSKRTSKSHGITFHMFPKEPSTLAAWIEALGMADWEPKERSAICSDHFKSDDFYLTVHGLRRIRSGAVPVVSHLTEEDLDSPAASKVCRICLSMDAKLYDLRDFKLDEMFEQVTGQFINEEDKLPQKLCWECAHRISVCSRFKTKAMRSQDLMMTVLQTASYITMRDIKSINRTLNQLKSPLIQKIYDPDWSDMVIVDDEVIIKPEDQREEIKVETDEIPIELEVKDEDDSNEIFFQDYMDGYDSEDDKTLSEVFTTNAMKKSKKVRKKREKVKVEKKKKRCEDDGSPTSTMDKYKTADVKRRKTQEALDENLFNITTLTYEQQIAEITKRQESDAYKNAIYKCTVCYRGFHIRDRYDAHAVRHTDQSGAYECFICKTRLKTGRALRKHITAQHTEQYSCKGCPFVTRNRGVAREHEKWHSGTKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLAEKTMPLEGPYCAVCDVTFVSEDAHERHLKLSSKHSSDNDPNRIRNDSQSMHTEKNGRVMRKIERRPVIHPRDPNNLECRPDQPGPVTCEQCGLQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRLFQSMALLKDHMWVHTGEKRFKCERCDKSFTQKTNLVFHMRVHSATRPTYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCDTCGKCFTTSGEQRAHVEHVHLKKPWPKRARPRARDDWQKCALSMED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00146936;
90% Identity: iTF_01302414; iTF_00640387; iTF_00640866; iTF_00012061; iTF_00012412; iTF_00013119; iTF_00013501;
80% Identity: iTF_01302414;