Basic Information

Insect: Acrobasis consociella
Gene Symbol: THAP3_2
Assembly: GCA_963555685.1
Location: OY743132.1:7854504-7880666[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.9 2.4e+02 3.4 1.4 1 23 349 371 349 371 0.80

2 11 0.019 1.6 10.3 0.7 1 23 378 401 378 401 0.94

3 11 0.36 31 6.2 0.2 1 23 405 427 405 427 0.92

4 11 0.0052 0.45 12.0 1.0 1 23 432 455 432 455 0.98

5 11 0.0035 0.3 12.6 0.7 1 23 459 482 459 482 0.96

6 11 1.6 1.4e+02 4.2 0.1 3 21 496 514 495 515 0.90

7 11 0.2 17 7.1 0.2 2 23 572 594 571 594 0.96

8 11 0.07 6 8.5 0.7 2 20 610 628 609 631 0.92

9 11 6.7e-06 0.00057 21.1 2.5 1 23 637 659 637 659 0.99

10 11 0.0003 0.025 16.0 2.8 1 23 666 688 666 688 0.98

11 11 0.00014 0.012 17.0 2.2 1 23 694 717 694 717 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.9	2.4e+02	3.4	1.4	1	23	349	371	349	371	0.80
2	11	0.019	1.6	10.3	0.7	1	23	378	401	378	401	0.94
3	11	0.36	31	6.2	0.2	1	23	405	427	405	427	0.92
4	11	0.0052	0.45	12.0	1.0	1	23	432	455	432	455	0.98
5	11	0.0035	0.3	12.6	0.7	1	23	459	482	459	482	0.96
6	11	1.6	1.4e+02	4.2	0.1	3	21	496	514	495	515	0.90
7	11	0.2	17	7.1	0.2	2	23	572	594	571	594	0.96
8	11	0.07	6	8.5	0.7	2	20	610	628	609	631	0.92
9	11	6.7e-06	0.00057	21.1	2.5	1	23	637	659	637	659	0.99
10	11	0.0003	0.025	16.0	2.8	1	23	666	688	666	688	0.98
11	11	0.00014	0.012	17.0	2.2	1	23	694	717	694	717	0.93

Sequence Information

Coding Sequence: ATGCGTTGCAGTGTGCCTAGTTGTACTAACGATACGAAAAGAATATCTAAAAGCCATGGAATCACGTTTCATATgtTCCCAAAAGAGCCAACAACTCAAGCAGCCTGGCTCGAAGCCCTTGGCATGGCTGACTGGGAGCCAAAGGAACGGAGTGCAATATGTTCAGATCACTTCCGGGAAGAAGACTTTTATTTGACCAGCGGTGGACTGCGGAGGATCAGGAGTGGGGCGGTGCCAGTCATTGCCCGTCTTACTGATGAAGATCTGGAGGCCCCAGCGGTACTGAGGGTGTGCAGAATATGCCTGTCGGTGGATGCCAAGCTTTATGACTTAAGGGATGTCGTATTAGACGAGATGTTTGAACAAGTCACGGGCCAATATATAAGCGAAGAGGACAAGCTACCGCAGAAGCTGTGCTGGGAGTGCGCGCACAGAATAGTAGGGTGCTCCCGGTTCAAGAGCAAAGCTCTCAGAAGTCGAGACCTCATGATGGCTGTGCTGCAGACTGCCTCATATATAACAAtaagagacataaaatccatAAACCGCACGCTGAACCAGCTAAAATCGCCCTTAATACAGCGGATATACGACCCAGATTGGTCTGACATGGTCATAGTGGACGACGAGGTGGTCGTCAAGCCGGAAGACCGGAGGGAGGACATCAAAGTGGAAACTGATGAGatccCCATAGAGTTAGAAGTGAAAAACGAAGATGATTCCAACGAGATATTCTTCCAAGACTTCGTGGACGGGTTTGACGATAGTGACGATAAGACCCTGAGCGAGGTGTTCGCTGAACGCAAGGTCAGGGCGAGGAAGAAGAGGAAGGTCAAGGTCAAAGTAGAGAAGAAGAGGAAGAGGTGCGAAGACGATGACAACCCTAGTTCTACTATGGATAAgtacaAAACCTCAGACGTGAAACGGCGGAAAACGCAAGAGGCCTTAGACGAGAACCTCTTTAACATCACGACGTTGACGTACGAGCAACAAATAGCTGAAATAGCCAAGAGGCAGGAGTCGGACGCGTATAAGAACGCCATCTACAAGTGTACGGTGTGCTACAGGGGTTTCCACATCAGGGATCGGTACGACGCACATGCAGTCAGACACACAGACCAAAGCGGCGCGTACGAGTGTTTCATCTGCAAGACTAGGCTCAAGACCGGGCGCGCCCTGCGGAAACACATCACGGCGCAACACACGGAGCAGTACAGCTGTAAGGGGTGTCCGTTTGTCACGAGAAACAGGGGTGTAGCAAGGGAACACGAGAAATGGCATTCAGGAACGAAATACCAGTGTCCACATTGTCCGAGCGAATTCGACAAGCTAACGACCTACATGGGCCACATCCGCATCAAGCACGTGTCGGACTTTGTCTGCGAGCTGTGCGGGTACACGTTCGTGAGCAAGAAGGGCATCGACGTGCACAAGAAGAAGAAACACCGGCTGGCTGAGAAGACGatgcCGCTAGAGGGCCCGTACTGCGCGACGTGTGACGTCACGTTTGTGTCAGAAGACGCGCACGAGAGACATCTCAAGTTGTCCTCCAAACACAGCAGCGATAATGACCCcaaCCGCATAAGAAACGACTCGCAGAGCATGCACACGGAGAAAAATGGCAGGGTGATGAGGAAGATCGAGAGGAGGCCGGTTATTCATCCCAGGGACCCGAACAACCAGGACTGCCGGCCTGACCAACCGGGGCCTGTCACCTGCGAACAgTGCGGCGTCCAGTTGCGCGACTTGCGGCTGTACGCGCAGCACTTCCGGCGCGCGCACCCCGACAAGAACCGCACCAAGTACCCCGCCATGAAGACGCCCTGCATGTGCGAGCAGTGCGGGCGGCTGTTCCAGAGCATGGCCCTCCTAAAAGATCACATGTGGGTGCACACCGGCGAGAAGCGTTTCAAATGCGAGCGCTGCGACAAAAGCTTCACGCAGAAGACCAACCTGGTGTTCCACATGCGGGTGCACAGCGCCACGCGGCCCTCGTACGAGTGCCCGCTGTGTGGGAAGCACTTCGCCTTCTTCAACAACCGGAGACGGCACATGTTTATCCACACGGGCCTGAAGCCGTTCAAGTGCGACACGTGCGGCAAGTGCTTCACGACGGCCGGCGAGCAGCGCGCGCACGTGGAACATGTGCACCTCAAGAAGCCGTGGCCCAAGCGCGCGCGGCCGCGGCCACGGGACGACTGGCAGAAGTGCGCGCTCAGCATGGAGGACTAG
Protein Sequence: MRCSVPSCTNDTKRISKSHGITFHMFPKEPTTQAAWLEALGMADWEPKERSAICSDHFREEDFYLTSGGLRRIRSGAVPVIARLTDEDLEAPAVLRVCRICLSVDAKLYDLRDVVLDEMFEQVTGQYISEEDKLPQKLCWECAHRIVGCSRFKSKALRSRDLMMAVLQTASYITIRDIKSINRTLNQLKSPLIQRIYDPDWSDMVIVDDEVVVKPEDRREDIKVETDEIPIELEVKNEDDSNEIFFQDFVDGFDDSDDKTLSEVFAERKVRARKKRKVKVKVEKKRKRCEDDDNPSSTMDKYKTSDVKRRKTQEALDENLFNITTLTYEQQIAEIAKRQESDAYKNAIYKCTVCYRGFHIRDRYDAHAVRHTDQSGAYECFICKTRLKTGRALRKHITAQHTEQYSCKGCPFVTRNRGVAREHEKWHSGTKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLAEKTMPLEGPYCATCDVTFVSEDAHERHLKLSSKHSSDNDPNRIRNDSQSMHTEKNGRVMRKIERRPVIHPRDPNNQDCRPDQPGPVTCEQCGVQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRLFQSMALLKDHMWVHTGEKRFKCERCDKSFTQKTNLVFHMRVHSATRPSYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCDTCGKCFTTAGEQRAHVEHVHLKKPWPKRARPRPRDDWQKCALSMED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00146936;
90% Identity: iTF_01302784;
80% Identity: iTF_00012061;