Rfor014954.1
Basic Information
- Insect
- Rhodophaea formosa
- Gene Symbol
- dl
- Assembly
- GCA_963082605.1
- Location
- OY720216.1:1054410-1093387[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-52 3.6e-48 164.6 0.2 2 123 39 162 38 174 0.95 2 2 6.1e-14 5.2e-10 40.4 0.0 124 169 242 287 227 287 0.91
Sequence Information
- Coding Sequence
- ATGTTGCACTACTGTAAAGTTGAGGTGATAGCGCACGACTACCCCACGTTCGGCGCGGGCGCGGCCCTCGAAGACATGTCGCGCCCGCCCGCGCCCCAGGCGGGGCCCTACACGCGCATCACCGAGCAGCCCGCTGGCAAGGCACTTAGGTTTCGTTACGAATGCGAGGGCCGGTCggcgggttcgattcctggcgtGAACAGCACGCCGGAGAACCGGACGTACCCCACCATTATGATATGCGGCTACAAGGGCCGTGTTGTTGTCGTGGTATCCTGCGTCACCAAGGATGAACCCTACAAACCACACCCCCACAACCTCGTCGGGCGGGAATGCCATAAAGGAGTGTGCACGGTCCGGGAGACCATCACTGATGAAAACAACCGGGTGGCCTTCAAGAACCTGGGTATCCAGTGCGTGAAACGACGCGACATAACTGATGCGCTGCGTGTGAGAGAGGAGCTACGAGTGGATCCCTTTAAAACATGTTATAGCACCCCAAAGATATGGAATGCTCAGCTGAGAGAACGACGACAAGGAAAGACGTTAATTGATGTTAAAATAGCAGGACTTTGGAGAGTTGTACCATTTGGACTCAAATGCTGTATTCAGCTGTATAGTGAAGTGGAAGACCGGTTTCTTTCTACACACTATGCCGGCGGCCTAGGCCCCGGCACAGCCGCCGGCCATGCCGCGGAAAAGCCGCTATATGCGGCCAGCGCGCGGTATCACCACAGGAGCCAACCCCAAAGCATAGACCTGAACGCGGTTCGATTATGCTTCCAAGTGTTTATGACGGACGACGCGGGGAAAGTAAAGCAGTCTCTTCACCCGGTGGTGTCCGACATCATCTACGACAAGAAGGCCATGAGCGACCTGCAGATCGCGCAGATCAGCCATTGCTCCGGCCCTATGAAGGGGGGCACGAGAGTCATCCTACTCTGCGAAAAGGTGAATCGAGAAGACACAGCGGTCGTCTTCTTCCAAGAAGAGAACGGCCAGGTTGTGTGGGAGGAGAGGGCGCACATAGAGGCCGTCCACAAGCAAGTGGCCATTGTGTTCCACACCCCTCCCTATACGTACTGCCAGACGCAGGAACATGTCACTGTGCAGCTGCAGCTGCAGCGAGTAACGGACAAAGCATGCAGCACGCCCGTCAACTTCGAGTACATCCCCGCACGCTTCTGCCCTCCAGGTGCGCGCAAGCCGCTCCCCGACCTCGCCGCGCTCGCTGCGCTACTCGCCGACACGCGCCCCGCGCCCTCCACCCACTCGCACGACACACAGACCGACACCGACACTCTCATGGACACCACCGACATCACCACCGCCATCCGCGCCGACGACAACAATAACAAAGCCATCGAAATAGACATAGTCACTTCCACTAGCGACTCCAACGATGAAGTCATAGTCAATGCTGATATCAACGGCAATATAGAAGACGTTGACATGCCCGATTCTAACGAAAAGAGTCTCGATGACTTACTCGATCAGGTCGCGGAGCTAGATGAGATTTACTCGGAAAACCGTACGCGTTTAGAGAATGTTACTAATATGAATAACGATGAGACGGATCTGGAAGATTTTAACGACGCGGGAACGTATACTAGTCTTCAATTGGCCTTTAAAAATCCTATTTCTATTAGCGAACCGGAACCGTACGAAGATGTACAAGTACAAACCTATCGGGGTCCTATTATAGAATTTTCTCCTTTGAAACGTGACGTTGATGACGAACGCGCCCCTCCTCTCCCCCCGAAGCGCGTGCGCAAAGTACAAGACAACTTTAAAACCAGCCAAACTTCCGTCGACAGTATACTCAAACCCGGCCGGCAACTGCCGGTAACGCGCAACACGGAGATCTTGAAACGCGACCGCACGGAACTGTCTGTAGCTCGAAGCGAGCCCGCGTTACCGCCCGTCAAAAAACGCTCGTTCTTTTCTCGCCTATTTCGACGAAAGGAGAAGTCTCCCGCGCCTAGCGTCAAATCCGAAGGCAAAGAAAAGAAATCCAAACCCGTCGGCAGATCTGTCTCTAGCATCTCTGGCCAACGTCCTTCGAAATTCAAATCGTCCGTTTCTCATACTTCTCTAAAAGATAACGCGTCAGGTACCGGTCTAAGTTACGCAGATAGTGTCACGCATATTTCTTTGCACGGCGATGAAAATGAGTTGAAGTCGACATCTCAGACGTCTTTGCGTAGACCTGCCAGCTTGGCTCCGTTACCCCCAACAGATGGCGGCACTATCCTAGTTGCAGAGAGCGTTCTCGCTTTAGATGCATCAGCGTTCAAAAAGCTGCAGGATGATCTAGACTTGACGGATGCGGAGCACTATGCGCTGTATATGGCGGTGGCGCCGCATGCGACTGTGTCGGAGTTTGACGAAACTAGTTGCTACTATTCGCCGGTAGATGGCAGCAAGTTTCAAAATTAA
- Protein Sequence
- MLHYCKVEVIAHDYPTFGAGAALEDMSRPPAPQAGPYTRITEQPAGKALRFRYECEGRSAGSIPGVNSTPENRTYPTIMICGYKGRVVVVVSCVTKDEPYKPHPHNLVGRECHKGVCTVRETITDENNRVAFKNLGIQCVKRRDITDALRVREELRVDPFKTCYSTPKIWNAQLRERRQGKTLIDVKIAGLWRVVPFGLKCCIQLYSEVEDRFLSTHYAGGLGPGTAAGHAAEKPLYAASARYHHRSQPQSIDLNAVRLCFQVFMTDDAGKVKQSLHPVVSDIIYDKKAMSDLQIAQISHCSGPMKGGTRVILLCEKVNREDTAVVFFQEENGQVVWEERAHIEAVHKQVAIVFHTPPYTYCQTQEHVTVQLQLQRVTDKACSTPVNFEYIPARFCPPGARKPLPDLAALAALLADTRPAPSTHSHDTQTDTDTLMDTTDITTAIRADDNNNKAIEIDIVTSTSDSNDEVIVNADINGNIEDVDMPDSNEKSLDDLLDQVAELDEIYSENRTRLENVTNMNNDETDLEDFNDAGTYTSLQLAFKNPISISEPEPYEDVQVQTYRGPIIEFSPLKRDVDDERAPPLPPKRVRKVQDNFKTSQTSVDSILKPGRQLPVTRNTEILKRDRTELSVARSEPALPPVKKRSFFSRLFRRKEKSPAPSVKSEGKEKKSKPVGRSVSSISGQRPSKFKSSVSHTSLKDNASGTGLSYADSVTHISLHGDENELKSTSQTSLRRPASLAPLPPTDGGTILVAESVLALDASAFKKLQDDLDLTDAEHYALYMAVAPHATVSEFDETSCYYSPVDGSKFQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00640052; iTF_00640051; iTF_00146169; iTF_00011710; iTF_00012704;
- 90% Identity
- -
- 80% Identity
- -