Rpro011749.1
Basic Information
- Insect
- Rhodnius prolixus
- Gene Symbol
- tfip11
- Assembly
- None
- Location
- HiC:37945026-37953201[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.83 8.3e+03 -3.8 0.0 137 155 247 266 240 272 0.64 2 3 1.1e-81 1.1e-77 261.5 15.4 1 275 388 663 388 663 0.97 3 3 0.28 2.8e+03 -2.2 0.0 244 261 677 694 672 705 0.74
Sequence Information
- Coding Sequence
- ATGTCTGACGAAGAATATGAAGCTTTTGAAGTAACTGATTATGACCTAGAGAATGAGTTTAATATAAATAGACGTAGAAGAACGACTAAAAATCAACAAATATATGGTATTTGGTCCCGCGACAGTGACGACGATGAGGGTGAAGGCAGGCCATCGTTCAAGTCTGGTTCCCGGAAGGCAAAAAACCTCTCCTCGGCACCGATAGGATTTGTGTCAGGCGGCGTGCAGCAAGCAGGCCAGCCACAGGAAAAGAAGGAAGAAGGCGACgatgaagaagatgaagatgGTGGGGACATCCTCATACAAGCTGGGTCAAGCTCGAGtgaTGATGAAAAAGAACCCAGAATGGCCTTCAAGTTGGATTCTCTGCTTAATACGGGAGCGGAGGAAATAGCTGGTCTTAGAAAGAAACATTACCAACACAACTCCGTCCTTAGTAACAAAGGTGTAGGCACTTGGGAAAAACACACAAAGGGAATAGGTGCCAAACTTCTCCTTCAGATGGGTTTCCAACCTGGAAAAGGGCTGGGAAAGGATCTCCAAGGAATACAGGCTCCCATAGAAGCGAAACTGAGAAAAGGACGAGGCGCTATTGGAGCTTATGGTCCAGAGAAATCTCAAAAAGTAGCCGAAGTTAAACCAgagccacaaaaaattaaagagggCATAGAGAAAATATCCTTGTGGAAAAAAGGCGAACATGGAAGAAACAAGAAAGCCAAATATATCTATAAAAGTATTGAAGATGTATTAGACCAGAGTTGGCAACCccagagaaaaagagaatttaaTGAGCTTTCCAAGGTAAAGGTGATAGATATGACTGGCCCAGAACAGAGAGTATTATCTGGGTATCATGCAATATCTGGAAATCAGAAACCATCTGATGAATGGGATCTTAGGAAGgacaagaaattcaaaaacttcGAAATGCCTGAATTACTGCATAATCTTAATCTGCTTGTAGAAATGTGTGAACAGGACATCATCGCCAAAGATCGACAGTTGAGATACAATGAAGATCGCATCGTATCTTTGAAAAACGATAGGGATACAATGCAAAAAGTAGTGGATCAAGAAGAAGCAACAATCAGTTCATTAGAACATGTTTTGAATGTGCTCGATTCTCTTACACAGGGAAGCAAGGATGGTCGCATGTCATTGGATGATATTGCGAATGCTTATCAACAATtacaaactaATCATCCTACAGAATACATAATGTACAACCTTGCTGGCTTGGCTCCAGGAATTTTGAAACCTCTCTTGAAGAAAGAGTTAGAACAATGGTCACCATTAGTGGATGCAAGGGGGCCGCTTGATCTTATTCTAAAATGGGCTGGACTCTTAGCAAGTGCACAGGGCGCGACACTCGCAGCGGTAGCGTGTGGCACTCAGGCAACATTGGCTGATCCTTTGCACAGAATATTATGGGAAGTATGGGCCCCTGAGATCATCAAGTGTGTTGGAAATTGGAATGCAAAAGATCCAGTACCTATGCAAACGCTCTTCGAAACATGGGAATCAGTAGTGCCTAAGTGGATTCTCGACAATTTATTACAGCAACAAGTGATGGCTAAGTTACAGGAGACAGTAGAACAATGGAATCCTCTCACTGACACAATTCCAATACATACTTGGGTTCTGCCTTGGATGCCTCAACTTGgtAAACGTATTAGGGTATCAGTGCTTCCCGTAATAAGACAGAAATTGGCCACCGCCCTTACTGGATGGCATCCTTCGGACAGCTCGGCTAGGTATATGTTGCAGCCTTGGGCCAATGTCTTTACTCCACAAGAGATGGATACATTTCTAGTCAATAATATAATGCCGAAATTAGCTCAGGCACTTGGACAAATGTATATATctcatcaaaatttaaatttagATGCTTGGAAATGGGTGATGGAATGGAATGAGTTAGTGCGACCTCCTTTAATGGCAGATTTATTAGATCAACATTTTTTCCCAAAGTGGCTTCAGGTGCTTACTGTTTGGCTGAATACTTGTCCAAATTATGATCAAGTTATGGCTTGGTATTCCGGCTGGAAATCGGTAATACCCCCCCATCTCCTTGAAGAACAGAGAGTTAAAGatcAACTTAGGAATGCTTTAGAGTTAATGAGCAGATCCGTTGGTGGGCCAGTATTACCTCCCCCtccaccaccaccacctccTCCTGATATTTCGTCTGGGAGATTTCAGGGCATGGCGGAAGCAGTGCGTACAGCAACTCAAATGGTTGAAGGCTATAAAGATCTTGTCCAAAAAAGATGTGAAGAAAGGGGCGTCGTATTTCATCCTCTGCCAAACAGGTATAAAGAAGGAAAACAAGTTTACCGCTGTGGAGCAGTTCAAATGTACATAGATCGCAATGTAATCTTTAACTGTGATCACAACACGGGCAACTGGATCCCAATATCGTTGCAAGCGCTTTTAGAGAAGGCCGCTGGCATTGGATGA
- Protein Sequence
- MSDEEYEAFEVTDYDLENEFNINRRRRTTKNQQIYGIWSRDSDDDEGEGRPSFKSGSRKAKNLSSAPIGFVSGGVQQAGQPQEKKEEGDDEEDEDGGDILIQAGSSSSDDEKEPRMAFKLDSLLNTGAEEIAGLRKKHYQHNSVLSNKGVGTWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGIQAPIEAKLRKGRGAIGAYGPEKSQKVAEVKPEPQKIKEGIEKISLWKKGEHGRNKKAKYIYKSIEDVLDQSWQPQRKREFNELSKVKVIDMTGPEQRVLSGYHAISGNQKPSDEWDLRKDKKFKNFEMPELLHNLNLLVEMCEQDIIAKDRQLRYNEDRIVSLKNDRDTMQKVVDQEEATISSLEHVLNVLDSLTQGSKDGRMSLDDIANAYQQLQTNHPTEYIMYNLAGLAPGILKPLLKKELEQWSPLVDARGPLDLILKWAGLLASAQGATLAAVACGTQATLADPLHRILWEVWAPEIIKCVGNWNAKDPVPMQTLFETWESVVPKWILDNLLQQQVMAKLQETVEQWNPLTDTIPIHTWVLPWMPQLGKRIRVSVLPVIRQKLATALTGWHPSDSSARYMLQPWANVFTPQEMDTFLVNNIMPKLAQALGQMYISHQNLNLDAWKWVMEWNELVRPPLMADLLDQHFFPKWLQVLTVWLNTCPNYDQVMAWYSGWKSVIPPHLLEEQRVKDQLRNALELMSRSVGGPVLPPPPPPPPPPDISSGRFQGMAEAVRTATQMVEGYKDLVQKRCEERGVVFHPLPNRYKEGKQVYRCGAVQMYIDRNVIFNCDHNTGNWIPISLQALLEKAAGIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478819;
- 90% Identity
- iTF_01478819;
- 80% Identity
- -